RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 TBC1D9BQ66K14 1250 aa25.2■■□□□ 1.62
TRIM4-202ENST00000354241 LAMB2P55268 1798 aa25.19■■□□□ 1.62
TRIM4-202ENST00000354241 HCLS1P14317 486 aaPredicted RBP25.19■■□□□ 1.62
TRIM4-202ENST00000354241 ANP32AP39687 249 aaKnown RBP25.19■■□□□ 1.62
TRIM4-202ENST00000354241 TAF7LQ5H9L4 462 aa25.19■■□□□ 1.62
TRIM4-202ENST00000354241 EAF2Q96CJ1 260 aaPredicted RBP25.19■■□□□ 1.62
TRIM4-202ENST00000354241 GREM2Q9H772 168 aa25.18■■□□□ 1.62
TRIM4-202ENST00000354241 EYA2O00167 538 aa25.18■■□□□ 1.62
TRIM4-202ENST00000354241 TBC1D9Q6ZT07 1266 aa25.18■■□□□ 1.62
TRIM4-202ENST00000354241 GPATCH3Q96I76 525 aa25.18■■□□□ 1.62
TRIM4-202ENST00000354241 CCDC8Q9H0W5 538 aaPredicted RBP25.18■■□□□ 1.62
TRIM4-202ENST00000354241 UPF2Q9HAU5 1272 aaKnown RBP25.18■■□□□ 1.62
TRIM4-202ENST00000354241 ITGA6P23229 1130 aa25.17■■□□□ 1.62
TRIM4-202ENST00000354241 IL15P40933 162 aaPredicted RBP25.17■■□□□ 1.62
TRIM4-202ENST00000354241 MFAP1P55081 439 aaKnown RBP25.17■■□□□ 1.62
TRIM4-202ENST00000354241 LRRC24Q50LG9 513 aa25.17■■□□□ 1.62
TRIM4-202ENST00000354241 ATG9AQ7Z3C6 839 aa25.17■■□□□ 1.62
TRIM4-202ENST00000354241 PROM2Q8N271 834 aa25.17■■□□□ 1.62
TRIM4-202ENST00000354241 TTC41PQ6P2S7 1318 aa25.17■■□□□ 1.62
TRIM4-202ENST00000354241 USP42Q9H9J4 1324 aaKnown RBP25.17■■□□□ 1.62
TRIM4-202ENST00000354241 PI4K2BQ8TCG2 481 aa25.16■■□□□ 1.62
TRIM4-202ENST00000354241 TNS1Q9HBL0 1735 aaKnown RBP25.16■■□□□ 1.62
TRIM4-202ENST00000354241 ANKRD18BA2A2Z9 1011 aa25.16■■□□□ 1.62
TRIM4-202ENST00000354241 TRIM6-TRIM34B2RNG4 842 aa25.16■■□□□ 1.62
TRIM4-202ENST00000354241 PLSCR1O15162 318 aa25.16■■□□□ 1.62
TRIM4-202ENST00000354241 CIAO1O76071 339 aa25.16■■□□□ 1.62
TRIM4-202ENST00000354241 ADRA2BP18089 450 aa25.16■■□□□ 1.62
TRIM4-202ENST00000354241 PUS3Q9BZE2 481 aaKnown RBP25.16■■□□□ 1.62
TRIM4-202ENST00000354241 AK9Q5TCS8 1911 aa25.15■■□□□ 1.62
TRIM4-202ENST00000354241 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.15■■□□□ 1.62
TRIM4-202ENST00000354241 HSP90B1P14625 803 aaKnown RBP25.15■■□□□ 1.62
TRIM4-202ENST00000354241 TNNI3KQ59H18 835 aa25.15■■□□□ 1.62
TRIM4-202ENST00000354241 SETDB2Q96T68 719 aa25.15■■□□□ 1.62
TRIM4-202ENST00000354241 FPGT-TNNI3KV9GXZ4 949 aa25.15■■□□□ 1.62
TRIM4-202ENST00000354241 COL24A1Q17RW2 1714 aa25.15■■□□□ 1.62
TRIM4-202ENST00000354241 RILPL2Q969X0 211 aa25.14■■□□□ 1.62
TRIM4-202ENST00000354241 ECHDC1Q9NTX5 307 aa25.14■■□□□ 1.62
TRIM4-202ENST00000354241 TLR7Q9NYK1 1049 aaKnown RBP25.14■■□□□ 1.62
TRIM4-202ENST00000354241 ERC2O15083 957 aa25.14■■□□□ 1.61
TRIM4-202ENST00000354241 HMGB2P26583 209 aaKnown RBP25.13■■□□□ 1.61
TRIM4-202ENST00000354241 ERFEQ4G0M1 354 aa25.13■■□□□ 1.61
TRIM4-202ENST00000354241 GLRX3O76003 335 aaKnown RBP25.12■■□□□ 1.61
TRIM4-202ENST00000354241 FBXO3Q9UK99 471 aa25.12■■□□□ 1.61
TRIM4-202ENST00000354241 MAP4K4O95819 1239 aaPredicted RBP25.12■■□□□ 1.61
TRIM4-202ENST00000354241 SSFA2P28290 1259 aa25.12■■□□□ 1.61
TRIM4-202ENST00000354241 GTF2E1P29083 439 aaPredicted RBP25.12■■□□□ 1.61
TRIM4-202ENST00000354241 CASC1Q6TDU7 716 aa25.12■■□□□ 1.61
TRIM4-202ENST00000354241 CASZ1Q86V15 1759 aa25.11■■□□□ 1.61
TRIM4-202ENST00000354241 NYXQ9GZU5 481 aa25.11■■□□□ 1.61
TRIM4-202ENST00000354241 CCDC152Q4G0S7 254 aa25.1■■□□□ 1.61
TRIM4-202ENST00000354241 NBPF5PQ86XG9 351 aaPredicted RBP25.1■■□□□ 1.61
TRIM4-202ENST00000354241 LDHAL6AQ6ZMR3 332 aa25.09■■□□□ 1.61
TRIM4-202ENST00000354241 GPR108Q9NPR9 543 aa25.09■■□□□ 1.61
TRIM4-202ENST00000354241 CEP126Q9P2H0 1117 aa25.09■■□□□ 1.61
TRIM4-202ENST00000354241 DBNLQ9UJU6 430 aaKnown RBP25.09■■□□□ 1.61
TRIM4-202ENST00000354241 CNNM1Q9NRU3 951 aa25.08■■□□□ 1.61
TRIM4-202ENST00000354241 NEUROD6Q96NK8 337 aa25.08■■□□□ 1.6
TRIM4-202ENST00000354241 SPEF2Q9C093 1822 aa25.08■■□□□ 1.6
TRIM4-202ENST00000354241 RGPD3A6NKT7 1758 aaPredicted RBP25.07■■□□□ 1.6
TRIM4-202ENST00000354241 RGPD4Q7Z3J3 1758 aa25.07■■□□□ 1.6
TRIM4-202ENST00000354241 CNTROBQ8N137 903 aa25.07■■□□□ 1.6
TRIM4-202ENST00000354241 DBNDD2Q9BQY9 259 aa25.07■■□□□ 1.6
TRIM4-202ENST00000354241 ZNF609O15014 1411 aa25.07■■□□□ 1.6
TRIM4-202ENST00000354241 ABCC12Q96J65 1359 aa25.06■■□□□ 1.6
TRIM4-202ENST00000354241 TBC1D32Q96NH3 1257 aa25.06■■□□□ 1.6
TRIM4-202ENST00000354241 LRP5O75197 1615 aa25.06■■□□□ 1.6
TRIM4-202ENST00000354241 TPTE2Q6XPS3 522 aa25.06■■□□□ 1.6
TRIM4-202ENST00000354241 SEC31BQ9NQW1 1179 aa25.06■■□□□ 1.6
TRIM4-202ENST00000354241 TFCP2L1Q9NZI6 479 aa25.06■■□□□ 1.6
TRIM4-202ENST00000354241 RIPOR2Q9Y4F9 1068 aa25.06■■□□□ 1.6
TRIM4-202ENST00000354241 RIC1Q4ADV7 1423 aa25.05■■□□□ 1.6
TRIM4-202ENST00000354241 NFIXQ14938 502 aa25.05■■□□□ 1.6
TRIM4-202ENST00000354241 ZNF827Q17R98 1081 aa25.05■■□□□ 1.6
TRIM4-202ENST00000354241 METTL24Q5JXM2 366 aa25.05■■□□□ 1.6
TRIM4-202ENST00000354241 CARMIL3Q8ND23 1372 aa25.05■■□□□ 1.6
TRIM4-202ENST00000354241 RTL9Q8NET4 1388 aa25.05■■□□□ 1.6
TRIM4-202ENST00000354241 NPHP1O15259 732 aa25.04■■□□□ 1.6
TRIM4-202ENST00000354241 EIF5BO60841 1220 aaKnown RBP25.04■■□□□ 1.6
TRIM4-202ENST00000354241 GYS1P13807 737 aa25.04■■□□□ 1.6
TRIM4-202ENST00000354241 TIMM10P62072 90 aa25.04■■□□□ 1.6
TRIM4-202ENST00000354241 C22orf23Q9BZE7 217 aa25.04■■□□□ 1.6
TRIM4-202ENST00000354241 A0A1B0GUL7 405 aa25.04■■□□□ 1.6
TRIM4-202ENST00000354241 SLC10A5Q5PT55 438 aa25.04■■□□□ 1.6
TRIM4-202ENST00000354241 C3orf67Q6ZVT6 689 aa25.04■■□□□ 1.6
TRIM4-202ENST00000354241 BOLA2Q9H3K6 86 aa25.04■■□□□ 1.6
TRIM4-202ENST00000354241 AKAP2Q9Y2D5 859 aa25.04■■□□□ 1.6
TRIM4-202ENST00000354241 AKT1S1Q96B36 256 aa25.03■■□□□ 1.6
TRIM4-202ENST00000354241 CCDC24Q8N4L8 307 aa25.02■■□□□ 1.6
TRIM4-202ENST00000354241 CHMLP26374 656 aa25.02■■□□□ 1.6
TRIM4-202ENST00000354241 MPHOSPH8Q99549 860 aa25.02■■□□□ 1.6
TRIM4-202ENST00000354241 ATP5JP18859 108 aa25.01■■□□□ 1.59
TRIM4-202ENST00000354241 IGHMBP2P38935 993 aaKnown RBP25.01■■□□□ 1.59
TRIM4-202ENST00000354241 SF3B3Q15393 1217 aaKnown RBP25.01■■□□□ 1.59
TRIM4-202ENST00000354241 EVI5LQ96CN4 794 aa25■■□□□ 1.59
TRIM4-202ENST00000354241 NLRP3Q96P20 1036 aa25■■□□□ 1.59
TRIM4-202ENST00000354241 IPO9Q96P70 1041 aaKnown RBP25■■□□□ 1.59
TRIM4-202ENST00000354241 TAF1P21675 1872 aa24.99■■□□□ 1.59
TRIM4-202ENST00000354241 MSH5O43196 834 aa24.99■■□□□ 1.59
TRIM4-202ENST00000354241 CDC5LQ99459 802 aaKnown RBP24.99■■□□□ 1.59
TRIM4-202ENST00000354241 MROH5Q6ZUA9 1318 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms