RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 UBE2HP62256 183 aa4.43□□□□□ -1.7
RNF38-203ENST00000353739 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.43□□□□□ -1.7
RNF38-203ENST00000353739 SLAIN2Q9P270 581 aa4.43□□□□□ -1.7
RNF38-203ENST00000353739 BRPF3Q9ULD4 1205 aa4.43□□□□□ -1.7
RNF38-203ENST00000353739 RBM8AQ9Y5S9 174 aaKnown RBP4.43□□□□□ -1.7
RNF38-203ENST00000353739 SLC27A2O14975 620 aa4.43□□□□□ -1.7
RNF38-203ENST00000353739 F13A1P00488 732 aa4.43□□□□□ -1.7
RNF38-203ENST00000353739 KCNA4P22459 653 aa4.43□□□□□ -1.7
RNF38-203ENST00000353739 MSNP26038 577 aaKnown RBP4.43□□□□□ -1.7
RNF38-203ENST00000353739 NECTIN1Q15223 517 aa4.43□□□□□ -1.7
RNF38-203ENST00000353739 TTF1Q15361 905 aaPredicted RBP4.43□□□□□ -1.7
RNF38-203ENST00000353739 TSHZ3Q63HK5 1081 aa4.43□□□□□ -1.7
RNF38-203ENST00000353739 PRPF40BQ6NWY9 871 aaKnown RBP4.43□□□□□ -1.7
RNF38-203ENST00000353739 CAVIN1Q6NZI2 390 aaKnown RBP4.43□□□□□ -1.7
RNF38-203ENST00000353739 THRAP3Q9Y2W1 955 aaKnown RBP4.43□□□□□ -1.7
RNF38-203ENST00000353739 SASH1O94885 1247 aa4.43□□□□□ -1.7
RNF38-203ENST00000353739 MAP4K4O95819 1239 aaPredicted RBP4.43□□□□□ -1.7
RNF38-203ENST00000353739 HMGN5P82970 282 aaKnown RBP4.43□□□□□ -1.7
RNF38-203ENST00000353739 TRIM28Q13263 835 aaKnown RBP4.43□□□□□ -1.7
RNF38-203ENST00000353739 UNC5CLQ8IV45 518 aa4.43□□□□□ -1.7
RNF38-203ENST00000353739 PALD1Q9ULE6 856 aa4.43□□□□□ -1.7
RNF38-203ENST00000353739 ARAP2Q8WZ64 1704 aa4.43□□□□□ -1.7
RNF38-203ENST00000353739 PCCAP05165 728 aaPredicted RBP4.42□□□□□ -1.7
RNF38-203ENST00000353739 RFX5P48382 616 aaPredicted RBP4.42□□□□□ -1.7
RNF38-203ENST00000353739 SLC39A6Q13433 755 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 CCDC57Q2TAC2 916 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 TAF7LQ5H9L4 462 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 TTC39AQ5SRH9 613 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 USPL1Q5W0Q7 1092 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 LRP10Q7Z4F1 713 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 ZSCAN16Q9H4T2 348 aaPredicted RBP4.42□□□□□ -1.7
RNF38-203ENST00000353739 WDR19Q8NEZ3 1342 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 TOGARAM1Q9Y4F4 1720 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 ZNF831Q5JPB2 1677 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 ELP1O95163 1332 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 EYA2O00167 538 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 RGL2O15211 777 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 ANXA1P04083 346 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 CLCN1P35523 988 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 TFCP2Q12800 502 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 ZGPATQ8N5A5 531 aaKnown RBP4.42□□□□□ -1.7
RNF38-203ENST00000353739 KBTBD3Q8NAB2 608 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 SCAND2PQ9GZW5 306 aaPredicted RBP4.42□□□□□ -1.7
RNF38-203ENST00000353739 PA2G4Q9UQ80 394 aaKnown RBP4.42□□□□□ -1.7
RNF38-203ENST00000353739 LAMB2P55268 1798 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 RREB1Q92766 1687 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 DISP2A7MBM2 1401 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 DHX16O60231 1041 aaKnown RBP4.42□□□□□ -1.7
RNF38-203ENST00000353739 CAVIN2O95810 425 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 GJB2P29033 226 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 KRT85P78386 507 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 PTPN12Q05209 780 aaKnown RBP4.42□□□□□ -1.7
RNF38-203ENST00000353739 UBE3BQ7Z3V4 1068 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 EAF2Q96CJ1 260 aaPredicted RBP4.42□□□□□ -1.7
RNF38-203ENST00000353739 ZNF512BQ96KM6 892 aaPredicted RBP4.42□□□□□ -1.7
RNF38-203ENST00000353739 CHMP3Q9Y3E7 222 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 CASP7P55210 303 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 GORABQ5T7V8 394 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 NEK1Q96PY6 1258 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 ISCA1Q9BUE6 129 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 CCDC8Q9H0W5 538 aaPredicted RBP4.42□□□□□ -1.7
RNF38-203ENST00000353739 PAG1Q9NWQ8 432 aa4.42□□□□□ -1.7
RNF38-203ENST00000353739 GOLGA6L6A8MZA4 724 aa4.41□□□□□ -1.7
RNF38-203ENST00000353739 ERVV-1B6SEH8 477 aa4.41□□□□□ -1.7
RNF38-203ENST00000353739 RNF113AO15541 343 aaKnown RBP4.41□□□□□ -1.7
RNF38-203ENST00000353739 UQCRFS1P1P0C7P4 283 aa4.41□□□□□ -1.7
RNF38-203ENST00000353739 FOXO4P98177 505 aa4.41□□□□□ -1.7
RNF38-203ENST00000353739 TCIRG1Q13488 830 aa4.41□□□□□ -1.7
RNF38-203ENST00000353739 CHRNA2Q15822 529 aa4.41□□□□□ -1.7
RNF38-203ENST00000353739 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.41□□□□□ -1.7
RNF38-203ENST00000353739 ZNF396Q96N95 335 aaPredicted RBP4.41□□□□□ -1.7
RNF38-203ENST00000353739 SIL1Q9H173 461 aa4.41□□□□□ -1.7
RNF38-203ENST00000353739 CEP126Q9P2H0 1117 aa4.41□□□□□ -1.7
RNF38-203ENST00000353739 LRP5O75197 1615 aa4.41□□□□□ -1.7
RNF38-203ENST00000353739 DHX8Q14562 1220 aaKnown RBP4.41□□□□□ -1.7
RNF38-203ENST00000353739 TMED8Q6PL24 325 aaPredicted RBP4.41□□□□□ -1.7
RNF38-203ENST00000353739 BOLA2Q9H3K6 86 aa4.41□□□□□ -1.7
RNF38-203ENST00000353739 CFAP45Q9UL16 551 aa4.41□□□□□ -1.7
RNF38-203ENST00000353739 NWD2Q9ULI1 1742 aa4.41□□□□□ -1.7
RNF38-203ENST00000353739 MAP3K15Q6ZN16 1313 aa4.41□□□□□ -1.7
RNF38-203ENST00000353739 PRAMEF22A3QJZ6 481 aa4.41□□□□□ -1.7
RNF38-203ENST00000353739 GOLGA6L4A6NEF3 574 aa4.41□□□□□ -1.7
RNF38-203ENST00000353739 IFIT1P09914 478 aaKnown RBP4.41□□□□□ -1.7
RNF38-203ENST00000353739 FGD1P98174 961 aa4.41□□□□□ -1.7
RNF38-203ENST00000353739 ZBTB38Q8NAP3 1195 aaPredicted RBP4.41□□□□□ -1.7
RNF38-203ENST00000353739 KAZALD1Q96I82 304 aa4.41□□□□□ -1.7
RNF38-203ENST00000353739 DNAJC2Q99543 621 aaKnown RBP4.41□□□□□ -1.7
RNF38-203ENST00000353739 ZDHHC9Q9Y397 364 aa4.41□□□□□ -1.7
RNF38-203ENST00000353739 ATRNO75882 1429 aa4.41□□□□□ -1.7
RNF38-203ENST00000353739 ANKRD18BA2A2Z9 1011 aa4.41□□□□□ -1.7
RNF38-203ENST00000353739 HMGB2P26583 209 aaKnown RBP4.41□□□□□ -1.7
RNF38-203ENST00000353739 IFIT5Q13325 482 aaKnown RBP4.41□□□□□ -1.7
RNF38-203ENST00000353739 LMBR1LQ6UX01 489 aa4.41□□□□□ -1.7
RNF38-203ENST00000353739 FBXL16Q8N461 479 aa4.41□□□□□ -1.7
RNF38-203ENST00000353739 DDX19AQ9NUU7 478 aaKnown RBP4.41□□□□□ -1.7
RNF38-203ENST00000353739 USP16Q9Y5T5 823 aa4.41□□□□□ -1.7
RNF38-203ENST00000353739 MROH5Q6ZUA9 1318 aa4.4□□□□□ -1.7
RNF38-203ENST00000353739 H3BQV1 296 aa4.4□□□□□ -1.7
RNF38-203ENST00000353739 CTAGE5O15320 804 aa4.4□□□□□ -1.7
RNF38-203ENST00000353739 TAF5LO75529 589 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 183.3 ms