RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 KHNYNO15037 678 aaKnown RBP10.67□□□□□ -0.7
UBE2D3-204ENST00000349311 SFSWAPQ12872 951 aaKnown RBP10.67□□□□□ -0.7
UBE2D3-204ENST00000349311 CNTNAP3BQ96NU0 1288 aa10.67□□□□□ -0.7
UBE2D3-204ENST00000349311 CNTNAP3Q9BZ76 1288 aa10.67□□□□□ -0.7
UBE2D3-204ENST00000349311 BRD7Q9NPI1 651 aa10.67□□□□□ -0.7
UBE2D3-204ENST00000349311 MARK1Q9P0L2 795 aa10.67□□□□□ -0.7
UBE2D3-204ENST00000349311 NUP160Q12769 1436 aa10.67□□□□□ -0.7
UBE2D3-204ENST00000349311 CFAP43Q8NDM7 1665 aa10.66□□□□□ -0.7
UBE2D3-204ENST00000349311 ZBTB39O15060 712 aa10.66□□□□□ -0.7
UBE2D3-204ENST00000349311 MX2P20592 715 aa10.66□□□□□ -0.7
UBE2D3-204ENST00000349311 IDH3AP50213 366 aa10.66□□□□□ -0.7
UBE2D3-204ENST00000349311 TREML1Q86YW5 311 aa10.66□□□□□ -0.7
UBE2D3-204ENST00000349311 CEP63Q96MT8 703 aa10.66□□□□□ -0.7
UBE2D3-204ENST00000349311 MTMR7Q9Y216 660 aa10.66□□□□□ -0.7
UBE2D3-204ENST00000349311 CEP170Q5SW79 1584 aa10.65□□□□□ -0.7
UBE2D3-204ENST00000349311 FKBP4Q02790 459 aaKnown RBP eCLIP10.64□□□□□ -0.712e-9■■□□□ 12.2
UBE2D3-204ENST00000349311 SF3B2Q13435 895 aaKnown RBP10.64□□□□□ -0.71
UBE2D3-204ENST00000349311 ERICH6BQ5W0A0 696 aa10.64□□□□□ -0.71
UBE2D3-204ENST00000349311 FYCO1Q9BQS8 1478 aa10.63□□□□□ -0.71
UBE2D3-204ENST00000349311 CD33P20138 364 aa10.63□□□□□ -0.71
UBE2D3-204ENST00000349311 SERPINB4P48594 390 aa10.63□□□□□ -0.71
UBE2D3-204ENST00000349311 ARSDP51689 593 aa10.63□□□□□ -0.71
UBE2D3-204ENST00000349311 KCNA1Q09470 495 aa10.63□□□□□ -0.71
UBE2D3-204ENST00000349311 GRIN2CQ14957 1233 aa10.63□□□□□ -0.71
UBE2D3-204ENST00000349311 ABTB2Q8N961 1025 aa10.63□□□□□ -0.71
UBE2D3-204ENST00000349311 AVENQ9NQS1 362 aaPredicted RBP10.63□□□□□ -0.71
UBE2D3-204ENST00000349311 KCNH4Q9UQ05 1017 aa10.63□□□□□ -0.71
UBE2D3-204ENST00000349311 FMN1Q68DA7 1419 aa10.63□□□□□ -0.71
UBE2D3-204ENST00000349311 ICMTO60725 284 aa10.62□□□□□ -0.71
UBE2D3-204ENST00000349311 EGFRP00533 1210 aa10.62□□□□□ -0.71
UBE2D3-204ENST00000349311 MAP2K3P46734 347 aa10.62□□□□□ -0.71
UBE2D3-204ENST00000349311 KIAA0556O60303 1618 aa10.62□□□□□ -0.71
UBE2D3-204ENST00000349311 LRRIQ1Q96JM4 1722 aa10.61□□□□□ -0.71
UBE2D3-204ENST00000349311 PCF11O94913 1555 aaKnown RBP10.61□□□□□ -0.71
UBE2D3-204ENST00000349311 ADAMTS2O95450 1211 aa10.61□□□□□ -0.71
UBE2D3-204ENST00000349311 MTMR3Q13615 1198 aa10.61□□□□□ -0.71
UBE2D3-204ENST00000349311 SLC30A3Q99726 388 aa10.61□□□□□ -0.71
UBE2D3-204ENST00000349311 MDFIQ99750 246 aa10.61□□□□□ -0.71
UBE2D3-204ENST00000349311 KLF15Q9UIH9 416 aa10.61□□□□□ -0.71
UBE2D3-204ENST00000349311 KCNMB2Q9Y691 235 aa10.61□□□□□ -0.71
UBE2D3-204ENST00000349311 SHROOM2Q13796 1616 aa10.61□□□□□ -0.71
UBE2D3-204ENST00000349311 TIAM1Q13009 1591 aa10.6□□□□□ -0.71
UBE2D3-204ENST00000349311 CASKIN1Q8WXD9 1431 aa10.6□□□□□ -0.71
UBE2D3-204ENST00000349311 PDIA4P13667 645 aaKnown RBP10.6□□□□□ -0.71
UBE2D3-204ENST00000349311 MPSTP25325 297 aa10.6□□□□□ -0.71
UBE2D3-204ENST00000349311 GSX2Q9BZM3 304 aa10.6□□□□□ -0.71
UBE2D3-204ENST00000349311 EFCC1Q9HA90 598 aa10.6□□□□□ -0.71
UBE2D3-204ENST00000349311 ARAFP10398 606 aa10.59□□□□□ -0.71
UBE2D3-204ENST00000349311 ZAP70P43403 619 aa10.59□□□□□ -0.71
UBE2D3-204ENST00000349311 LRRC4BQ9NT99 713 aa10.59□□□□□ -0.71
UBE2D3-204ENST00000349311 NSFL1CQ9UNZ2 370 aaKnown RBP10.59□□□□□ -0.71
UBE2D3-204ENST00000349311 FAM13AO94988 1023 aa10.58□□□□□ -0.72
UBE2D3-204ENST00000349311 EIF1AXP47813 144 aaKnown RBP10.58□□□□□ -0.72
UBE2D3-204ENST00000349311 ZNF211Q13398 564 aaPredicted RBP10.58□□□□□ -0.72
UBE2D3-204ENST00000349311 NOM1Q5C9Z4 860 aaKnown RBP10.58□□□□□ -0.72
UBE2D3-204ENST00000349311 ZNF468Q5VIY5 522 aaPredicted RBP10.58□□□□□ -0.72
UBE2D3-204ENST00000349311 ACDQ96AP0 544 aa10.58□□□□□ -0.72
UBE2D3-204ENST00000349311 RTCBQ9Y3I0 505 aaKnown RBP10.58□□□□□ -0.72
UBE2D3-204ENST00000349311 DISP1Q96F81 1524 aa10.58□□□□□ -0.72
UBE2D3-204ENST00000349311 BMP4P12644 408 aa10.57□□□□□ -0.72
UBE2D3-204ENST00000349311 EPB42P16452 691 aa10.57□□□□□ -0.72
UBE2D3-204ENST00000349311 SPEM2Q0P670 501 aa10.57□□□□□ -0.72
UBE2D3-204ENST00000349311 FHOD3Q2V2M9 1422 aa10.57□□□□□ -0.72
UBE2D3-204ENST00000349311 DHX57Q6P158 1386 aaKnown RBP10.56□□□□□ -0.72
UBE2D3-204ENST00000349311 HECW1Q76N89 1606 aa10.56□□□□□ -0.72
UBE2D3-204ENST00000349311 SOWAHDA6NJG2 315 aa10.56□□□□□ -0.72
UBE2D3-204ENST00000349311 ABL1P00519 1130 aa10.56□□□□□ -0.72
UBE2D3-204ENST00000349311 ARHGAP4P98171 946 aa10.56□□□□□ -0.72
UBE2D3-204ENST00000349311 ALKBH2Q6NS38 261 aa10.56□□□□□ -0.72
UBE2D3-204ENST00000349311 ANO2Q9NQ90 1003 aa10.56□□□□□ -0.72
UBE2D3-204ENST00000349311 FZD6O60353 706 aa10.55□□□□□ -0.72
UBE2D3-204ENST00000349311 DEKP35659 375 aaKnown RBP10.55□□□□□ -0.72
UBE2D3-204ENST00000349311 CCINQ13939 588 aa10.55□□□□□ -0.72
UBE2D3-204ENST00000349311 TRIP4Q15650 581 aaPredicted RBP10.55□□□□□ -0.72
UBE2D3-204ENST00000349311 ZNF385CQ66K41 422 aaPredicted RBP10.55□□□□□ -0.72
UBE2D3-204ENST00000349311 LYPD4Q6UWN0 246 aa10.55□□□□□ -0.72
UBE2D3-204ENST00000349311 C1orf229Q6ZS94 237 aaPredicted RBP10.55□□□□□ -0.72
UBE2D3-204ENST00000349311 ATCAYQ86WG3 371 aa10.55□□□□□ -0.72
UBE2D3-204ENST00000349311 WHAMMQ8TF30 809 aa10.55□□□□□ -0.72
UBE2D3-204ENST00000349311 OXCT2Q9BYC2 517 aaPredicted RBP10.55□□□□□ -0.72
UBE2D3-204ENST00000349311 FAM13BQ9NYF5 915 aa10.55□□□□□ -0.72
UBE2D3-204ENST00000349311 USP20Q9Y2K6 914 aa10.55□□□□□ -0.72
UBE2D3-204ENST00000349311 PATL2C9JE40 543 aaKnown RBP10.54□□□□□ -0.72
UBE2D3-204ENST00000349311 SIN3BO75182 1162 aa10.54□□□□□ -0.72
UBE2D3-204ENST00000349311 CELA2BP08218 269 aaPredicted RBP10.54□□□□□ -0.72
UBE2D3-204ENST00000349311 HOMEZQ8IX15 550 aa10.54□□□□□ -0.72
UBE2D3-204ENST00000349311 RGL4Q8IZJ4 473 aa10.54□□□□□ -0.72
UBE2D3-204ENST00000349311 KCTD17Q8N5Z5 321 aa10.54□□□□□ -0.72
UBE2D3-204ENST00000349311 TNFRSF25Q93038 417 aa10.54□□□□□ -0.72
UBE2D3-204ENST00000349311 GDF2Q9UK05 429 aaPredicted RBP10.54□□□□□ -0.72
UBE2D3-204ENST00000349311 CDK11AQ9UQ88 783 aaPredicted RBP10.54□□□□□ -0.72
UBE2D3-204ENST00000349311 CCDC18Q5T9S5 1454 aa10.54□□□□□ -0.72
UBE2D3-204ENST00000349311 CLASP1Q7Z460 1538 aa10.53□□□□□ -0.72
UBE2D3-204ENST00000349311 ARHGEF15O94989 841 aa10.53□□□□□ -0.72
UBE2D3-204ENST00000349311 SLCO4C1Q6ZQN7 724 aa10.53□□□□□ -0.72
UBE2D3-204ENST00000349311 IVNS1ABPQ9Y6Y0 642 aa10.53□□□□□ -0.72
UBE2D3-204ENST00000349311 RAPGEF6Q8TEU7 1601 aa10.52□□□□□ -0.73
UBE2D3-204ENST00000349311 H3BRB1 525 aa10.52□□□□□ -0.73
UBE2D3-204ENST00000349311 OIP5O43482 229 aa10.52□□□□□ -0.73
UBE2D3-204ENST00000349311 MZF1P28698 734 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms