RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 SSH1Q8WYL5 1049 aa13.51□□□□□ -0.25
TRAF3-201ENST00000347662 C11orf95C9JLR9 678 aaPredicted RBP13.5□□□□□ -0.25
TRAF3-201ENST00000347662 GSTA5Q7RTV2 222 aa13.5□□□□□ -0.25
TRAF3-201ENST00000347662 ATP10BO94823 1461 aa13.5□□□□□ -0.25
TRAF3-201ENST00000347662 CCDC40Q4G0X9 1142 aa13.5□□□□□ -0.25
TRAF3-201ENST00000347662 PDCL2Q8N4E4 241 aa13.5□□□□□ -0.25
TRAF3-201ENST00000347662 CEP112Q8N8E3 955 aa13.5□□□□□ -0.25
TRAF3-201ENST00000347662 HYPKQ9NX55 129 aa13.5□□□□□ -0.25
TRAF3-201ENST00000347662 BIN2Q9UBW5 565 aaPredicted RBP13.5□□□□□ -0.25
TRAF3-201ENST00000347662 CCDC155Q8N6L0 562 aa13.5□□□□□ -0.25
TRAF3-201ENST00000347662 LRRC59Q96AG4 307 aaKnown RBP13.5□□□□□ -0.25
TRAF3-201ENST00000347662 DNAAF4Q8WXU2 420 aa13.5□□□□□ -0.25
TRAF3-201ENST00000347662 CIZ1Q9ULV3 898 aaPredicted RBP13.5□□□□□ -0.25
TRAF3-201ENST00000347662 STX6O43752 255 aa13.5□□□□□ -0.25
TRAF3-201ENST00000347662 TFCP2L1Q9NZI6 479 aa13.5□□□□□ -0.25
TRAF3-201ENST00000347662 ZSCAN12O43309 604 aa13.49□□□□□ -0.25
TRAF3-201ENST00000347662 PTPN14Q15678 1187 aa13.49□□□□□ -0.25
TRAF3-201ENST00000347662 SMC6Q96SB8 1091 aa13.49□□□□□ -0.25
TRAF3-201ENST00000347662 TOP1P11387 765 aaKnown RBP13.49□□□□□ -0.25
TRAF3-201ENST00000347662 KIAA0753Q2KHM9 967 aa13.49□□□□□ -0.25
TRAF3-201ENST00000347662 KIF1BPQ96EK5 621 aa13.49□□□□□ -0.25
TRAF3-201ENST00000347662 TTC21AQ8NDW8 1320 aa13.49□□□□□ -0.25
TRAF3-201ENST00000347662 NAPBQ9H115 298 aa13.49□□□□□ -0.25
TRAF3-201ENST00000347662 TMEM110-MUSTN1A8MSY1 372 aa13.49□□□□□ -0.25
TRAF3-201ENST00000347662 SLC5A1P13866 664 aa13.49□□□□□ -0.25
TRAF3-201ENST00000347662 SEPT14Q6ZU15 432 aa13.49□□□□□ -0.25
TRAF3-201ENST00000347662 A2MP01023 1474 aa13.49□□□□□ -0.25
TRAF3-201ENST00000347662 KIF4AO95239 1232 aa13.49□□□□□ -0.25
TRAF3-201ENST00000347662 SNRKQ9NRH2 765 aa13.49□□□□□ -0.25
TRAF3-201ENST00000347662 RAPGEF6Q8TEU7 1601 aa13.48□□□□□ -0.25
TRAF3-201ENST00000347662 SMARCC1Q92922 1105 aaPredicted RBP13.48□□□□□ -0.25
TRAF3-201ENST00000347662 TXNDC16Q9P2K2 825 aa13.48□□□□□ -0.25
TRAF3-201ENST00000347662 ZRANB1Q9UGI0 708 aa13.48□□□□□ -0.25
TRAF3-201ENST00000347662 SETDB2Q96T68 719 aa13.48□□□□□ -0.25
TRAF3-201ENST00000347662 JADE2Q9NQC1 790 aa13.48□□□□□ -0.25
TRAF3-201ENST00000347662 ST5P78524 1137 aa13.48□□□□□ -0.25
TRAF3-201ENST00000347662 GUCY1B3Q02153 619 aa13.48□□□□□ -0.25
TRAF3-201ENST00000347662 CCDC14Q49A88 953 aa13.48□□□□□ -0.25
TRAF3-201ENST00000347662 TBC1D5Q92609 795 aa13.48□□□□□ -0.25
TRAF3-201ENST00000347662 C19orf44Q9H6X5 657 aa13.48□□□□□ -0.25
TRAF3-201ENST00000347662 BANK1Q8NDB2 785 aa13.48□□□□□ -0.25
TRAF3-201ENST00000347662 F8W031 263 aaPredicted RBP13.47□□□□□ -0.25
TRAF3-201ENST00000347662 PI4KAP2A4QPH2 592 aa13.47□□□□□ -0.25
TRAF3-201ENST00000347662 PI4KAP1Q8N8J0 262 aa13.47□□□□□ -0.25
TRAF3-201ENST00000347662 CEP120Q8N960 986 aa13.47□□□□□ -0.25
TRAF3-201ENST00000347662 RIOK3O14730 519 aaKnown RBP13.47□□□□□ -0.25
TRAF3-201ENST00000347662 YEATS4O95619 227 aa13.47□□□□□ -0.25
TRAF3-201ENST00000347662 MAP3K12Q12852 859 aa13.47□□□□□ -0.25
TRAF3-201ENST00000347662 STXBP4Q6ZWJ1 553 aa13.47□□□□□ -0.25
TRAF3-201ENST00000347662 CDC5LQ99459 802 aaKnown RBP13.47□□□□□ -0.25
TRAF3-201ENST00000347662 CACYBPQ9HB71 228 aaKnown RBP13.47□□□□□ -0.25
TRAF3-201ENST00000347662 DACT3Q96B18 629 aaPredicted RBP13.47□□□□□ -0.25
TRAF3-201ENST00000347662 CALML4Q96GE6 196 aa13.47□□□□□ -0.25
TRAF3-201ENST00000347662 IQSEC3Q9UPP2 1182 aaPredicted RBP13.47□□□□□ -0.25
TRAF3-201ENST00000347662 KCNA6P17658 529 aa13.47□□□□□ -0.25
TRAF3-201ENST00000347662 SFPQP23246 707 aaKnown RBP eCLIP13.47□□□□□ -0.25
TRAF3-201ENST00000347662 CFAP157Q5JU67 520 aa13.47□□□□□ -0.25
TRAF3-201ENST00000347662 PPP1R42Q7Z4L9 355 aa13.47□□□□□ -0.25
TRAF3-201ENST00000347662 SYCP2Q9BX26 1530 aa13.47□□□□□ -0.25
TRAF3-201ENST00000347662 HSF2BPO75031 334 aa13.47□□□□□ -0.25
TRAF3-201ENST00000347662 GPATCH8Q9UKJ3 1502 aaKnown RBP13.47□□□□□ -0.25
TRAF3-201ENST00000347662 PLS1Q14651 629 aa13.46□□□□□ -0.25
TRAF3-201ENST00000347662 TRMT1Q9NXH9 659 aaKnown RBP13.46□□□□□ -0.25
TRAF3-201ENST00000347662 BTG4Q9NY30 223 aa13.46□□□□□ -0.25
TRAF3-201ENST00000347662 WHAMMQ8TF30 809 aa13.46□□□□□ -0.25
TRAF3-201ENST00000347662 TEX13AQ9BXU3 409 aaPredicted RBP13.46□□□□□ -0.25
TRAF3-201ENST00000347662 WDR7Q9Y4E6 1490 aa13.46□□□□□ -0.25
TRAF3-201ENST00000347662 TTC21BQ7Z4L5 1316 aa13.46□□□□□ -0.25
TRAF3-201ENST00000347662 SNRPA1P09661 255 aaKnown RBP13.46□□□□□ -0.26
TRAF3-201ENST00000347662 CASTP20810 708 aaKnown RBP13.46□□□□□ -0.26
TRAF3-201ENST00000347662 RIMS2Q9UQ26 1411 aa13.46□□□□□ -0.26
TRAF3-201ENST00000347662 GAS8O95995 478 aa13.46□□□□□ -0.26
TRAF3-201ENST00000347662 CKAP4Q07065 602 aaKnown RBP13.46□□□□□ -0.26
TRAF3-201ENST00000347662 SLFN5Q08AF3 891 aa13.46□□□□□ -0.26
TRAF3-201ENST00000347662 CTCFLQ8NI51 663 aaPredicted RBP13.46□□□□□ -0.26
TRAF3-201ENST00000347662 MAP3K11Q16584 847 aa13.45□□□□□ -0.26
TRAF3-201ENST00000347662 ANKFY1Q9P2R3 1169 aa13.45□□□□□ -0.26
TRAF3-201ENST00000347662 KIF21AQ7Z4S6 1674 aa13.45□□□□□ -0.26
TRAF3-201ENST00000347662 EEF2P13639 858 aaKnown RBP13.45□□□□□ -0.26
TRAF3-201ENST00000347662 MNAT1P51948 309 aa13.45□□□□□ -0.26
TRAF3-201ENST00000347662 NCBP1Q09161 790 aaKnown RBP13.45□□□□□ -0.26
TRAF3-201ENST00000347662 RASA3Q14644 834 aa13.45□□□□□ -0.26
TRAF3-201ENST00000347662 CCDC65Q8IXS2 484 aa13.45□□□□□ -0.26
TRAF3-201ENST00000347662 GOLGA8AA7E2F4 631 aa13.45□□□□□ -0.26
TRAF3-201ENST00000347662 GOLGA8BA8MQT2 603 aa13.45□□□□□ -0.26
TRAF3-201ENST00000347662 HSPA4P34932 840 aa13.45□□□□□ -0.26
TRAF3-201ENST00000347662 SARNPP82979 210 aaKnown RBP13.45□□□□□ -0.26
TRAF3-201ENST00000347662 TCHPQ9BT92 498 aa13.45□□□□□ -0.26
TRAF3-201ENST00000347662 GABPAQ06546 454 aa13.45□□□□□ -0.26
TRAF3-201ENST00000347662 RPAP2Q8IXW5 612 aaPredicted RBP13.45□□□□□ -0.26
TRAF3-201ENST00000347662 IDEP14735 1019 aa13.45□□□□□ -0.26
TRAF3-201ENST00000347662 GTF2F1P35269 517 aaKnown RBP eCLIP13.45□□□□□ -0.26
TRAF3-201ENST00000347662 EP400NLQ6ZTU2 488 aa13.45□□□□□ -0.26
TRAF3-201ENST00000347662 DDX12PQ92771 950 aa13.45□□□□□ -0.26
TRAF3-201ENST00000347662 PPME1Q9Y570 386 aa13.45□□□□□ -0.26
TRAF3-201ENST00000347662 CEP83Q9Y592 693 aa13.45□□□□□ -0.26
TRAF3-201ENST00000347662 RFC1P35251 1148 aaPredicted RBP13.45□□□□□ -0.26
TRAF3-201ENST00000347662 PPP2R5CQ13362 524 aa13.45□□□□□ -0.26
TRAF3-201ENST00000347662 FAM114A1Q8IWE2 563 aa13.45□□□□□ -0.26
TRAF3-201ENST00000347662 FAM169AQ9Y6X4 670 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms