RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 FUCA2Q9BTY2 467 aa7.27□□□□□ -1.25
CLCN3-201ENST00000347613 PUS3Q9BZE2 481 aaKnown RBP7.27□□□□□ -1.25
CLCN3-201ENST00000347613 C19orf44Q9H6X5 657 aa7.27□□□□□ -1.25
CLCN3-201ENST00000347613 CHMP3Q9Y3E7 222 aa7.27□□□□□ -1.25
CLCN3-201ENST00000347613 HCLS1P14317 486 aaPredicted RBP7.26□□□□□ -1.25
CLCN3-201ENST00000347613 MCM2P49736 904 aa7.26□□□□□ -1.25
CLCN3-201ENST00000347613 DDX46Q7L014 1031 aaKnown RBP7.26□□□□□ -1.25
CLCN3-201ENST00000347613 EVI5LQ96CN4 794 aa7.26□□□□□ -1.25
CLCN3-201ENST00000347613 SHANK3Q9BYB0 1731 aa7.26□□□□□ -1.25
CLCN3-201ENST00000347613 OVOS2A0A0G2JMS6 1433 aa7.26□□□□□ -1.25
CLCN3-201ENST00000347613 A0A087WWV3 80 aa7.26□□□□□ -1.25
CLCN3-201ENST00000347613 TTC6Q86TZ1 520 aa7.26□□□□□ -1.25
CLCN3-201ENST00000347613 TRIM44Q96DX7 344 aaPredicted RBP7.26□□□□□ -1.25
CLCN3-201ENST00000347613 FTOQ9C0B1 505 aaKnown RBP eCLIP7.26□□□□□ -1.252e-7■□□□□ 9
CLCN3-201ENST00000347613 LIG1P18858 919 aa7.26□□□□□ -1.25
CLCN3-201ENST00000347613 TNNI3KQ59H18 835 aa7.26□□□□□ -1.25
CLCN3-201ENST00000347613 LARP1Q6PKG0 1096 aaKnown RBP7.26□□□□□ -1.25
CLCN3-201ENST00000347613 ZSCAN30Q86W11 494 aa7.26□□□□□ -1.25
CLCN3-201ENST00000347613 GPHNQ9NQX3 736 aaPredicted RBP7.26□□□□□ -1.25
CLCN3-201ENST00000347613 SNRKQ9NRH2 765 aa7.26□□□□□ -1.25
CLCN3-201ENST00000347613 TFIP11Q9UBB9 837 aaKnown RBP7.26□□□□□ -1.25
CLCN3-201ENST00000347613 FPGT-TNNI3KV9GXZ4 949 aa7.26□□□□□ -1.25
CLCN3-201ENST00000347613 NUP188Q5SRE5 1749 aa7.26□□□□□ -1.25
CLCN3-201ENST00000347613 MYO5AQ9Y4I1 1855 aaKnown RBP7.25□□□□□ -1.25
CLCN3-201ENST00000347613 STRCQ7RTU9 1775 aa7.25□□□□□ -1.25
CLCN3-201ENST00000347613 PKD1L3Q7Z443 1732 aa7.25□□□□□ -1.25
CLCN3-201ENST00000347613 FOXP2O15409 715 aa7.25□□□□□ -1.25
CLCN3-201ENST00000347613 CYP21A2P08686 494 aa7.25□□□□□ -1.25
CLCN3-201ENST00000347613 G3BP1Q13283 466 aaKnown RBP eCLIP7.25□□□□□ -1.25
CLCN3-201ENST00000347613 CHST3Q7LGC8 479 aa7.25□□□□□ -1.25
CLCN3-201ENST00000347613 CCDC85AQ96PX6 553 aaPredicted RBP7.25□□□□□ -1.25
CLCN3-201ENST00000347613 DENND2AQ9ULE3 1009 aa7.25□□□□□ -1.25
CLCN3-201ENST00000347613 NOL7Q9UMY1 257 aaKnown RBP7.25□□□□□ -1.25
CLCN3-201ENST00000347613 NWD2Q9ULI1 1742 aa7.25□□□□□ -1.25
CLCN3-201ENST00000347613 PALLDQ8WX93 1383 aa7.25□□□□□ -1.25
CLCN3-201ENST00000347613 JCADQ9P266 1359 aa7.25□□□□□ -1.25
CLCN3-201ENST00000347613 A0A087WZG4 1122 aa7.25□□□□□ -1.25
CLCN3-201ENST00000347613 LMBR1LQ6UX01 489 aa7.25□□□□□ -1.25
CLCN3-201ENST00000347613 TMEM87AQ8NBN3 555 aa7.25□□□□□ -1.25
CLCN3-201ENST00000347613 RAPGEF4Q8WZA2 1011 aa7.25□□□□□ -1.25
CLCN3-201ENST00000347613 FSD1Q9BTV5 496 aa7.25□□□□□ -1.25
CLCN3-201ENST00000347613 USP25Q9UHP3 1055 aa7.25□□□□□ -1.25
CLCN3-201ENST00000347613 WDR33Q9C0J8 1336 aaKnown RBP7.25□□□□□ -1.25
CLCN3-201ENST00000347613 CAMK4Q16566 473 aa7.25□□□□□ -1.25
CLCN3-201ENST00000347613 RABL6Q3YEC7 729 aaPredicted RBP7.25□□□□□ -1.25
CLCN3-201ENST00000347613 DNAJC2Q99543 621 aaKnown RBP7.25□□□□□ -1.25
CLCN3-201ENST00000347613 TOGARAM1Q9Y4F4 1720 aa7.24□□□□□ -1.25
CLCN3-201ENST00000347613 VPS37CA5D8V6 355 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-201ENST00000347613 PTMSP20962 102 aa7.24□□□□□ -1.25
CLCN3-201ENST00000347613 HSP90AB3PQ58FF7 597 aa7.24□□□□□ -1.25
CLCN3-201ENST00000347613 PI16Q6UXB8 463 aa7.24□□□□□ -1.25
CLCN3-201ENST00000347613 KIAA1211Q6ZU35 1233 aa7.24□□□□□ -1.25
CLCN3-201ENST00000347613 TSC1Q92574 1164 aa7.24□□□□□ -1.25
CLCN3-201ENST00000347613 ZBTB3Q9H5J0 574 aa7.24□□□□□ -1.25
CLCN3-201ENST00000347613 COPRSQ9NQ92 184 aa7.24□□□□□ -1.25
CLCN3-201ENST00000347613 SMC3Q9UQE7 1217 aa7.24□□□□□ -1.25
CLCN3-201ENST00000347613 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.24□□□□□ -1.25
CLCN3-201ENST00000347613 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-201ENST00000347613 CTDNEP1O95476 244 aa7.24□□□□□ -1.25
CLCN3-201ENST00000347613 CSB-PGBD3P0DP91 1061 aa7.24□□□□□ -1.25
CLCN3-201ENST00000347613 FOSBP53539 338 aa7.24□□□□□ -1.25
CLCN3-201ENST00000347613 TTLL5Q6EMB2 1281 aa7.24□□□□□ -1.25
CLCN3-201ENST00000347613 IFNL2Q8IZJ0 200 aa7.24□□□□□ -1.25
CLCN3-201ENST00000347613 CYP46A1Q9Y6A2 500 aa7.24□□□□□ -1.25
CLCN3-201ENST00000347613 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.24□□□□□ -1.25
CLCN3-201ENST00000347613 KCPQ6ZWJ8 1503 aa7.24□□□□□ -1.25
CLCN3-201ENST00000347613 UTRNP46939 3433 aa7.24□□□□□ -1.25
CLCN3-201ENST00000347613 SNRPA1P09661 255 aaKnown RBP7.23□□□□□ -1.25
CLCN3-201ENST00000347613 TATP17735 454 aaPredicted RBP7.23□□□□□ -1.25
CLCN3-201ENST00000347613 RPS6KB1P23443 525 aa7.23□□□□□ -1.25
CLCN3-201ENST00000347613 SCARF1Q14162 830 aa7.23□□□□□ -1.25
CLCN3-201ENST00000347613 HSP90AB4PQ58FF6 505 aa7.23□□□□□ -1.25
CLCN3-201ENST00000347613 PGBD1Q96JS3 809 aa7.23□□□□□ -1.25
CLCN3-201ENST00000347613 TSPY26PQ9H489 355 aa7.23□□□□□ -1.25
CLCN3-201ENST00000347613 TTC12Q9H892 705 aaPredicted RBP7.23□□□□□ -1.25
CLCN3-201ENST00000347613 UBR2Q8IWV8 1755 aa7.23□□□□□ -1.25
CLCN3-201ENST00000347613 KIF1AQ12756 1690 aa7.23□□□□□ -1.25
CLCN3-201ENST00000347613 FAM177BA6PVY3 158 aa7.23□□□□□ -1.25
CLCN3-201ENST00000347613 ADORA1P30542 326 aa7.23□□□□□ -1.25
CLCN3-201ENST00000347613 USPL1Q5W0Q7 1092 aa7.23□□□□□ -1.25
CLCN3-201ENST00000347613 TM6SF1Q9BZW5 370 aa7.23□□□□□ -1.25
CLCN3-201ENST00000347613 GJB4Q9NTQ9 266 aa7.23□□□□□ -1.25
CLCN3-201ENST00000347613 SPATA31A3Q5VYP0 1347 aa7.23□□□□□ -1.25
CLCN3-201ENST00000347613 H7C1W4 665 aa7.22□□□□□ -1.25
CLCN3-201ENST00000347613 EPB41L2O43491 1005 aaKnown RBP7.22□□□□□ -1.25
CLCN3-201ENST00000347613 OFD1O75665 1012 aa7.22□□□□□ -1.25
CLCN3-201ENST00000347613 ATP5JP18859 108 aa7.22□□□□□ -1.25
CLCN3-201ENST00000347613 RBM10P98175 930 aaKnown RBP7.22□□□□□ -1.25
CLCN3-201ENST00000347613 SCRN1Q12765 414 aa7.22□□□□□ -1.25
CLCN3-201ENST00000347613 DCAF5Q96JK2 942 aa7.22□□□□□ -1.25
CLCN3-201ENST00000347613 KCNF1Q9H3M0 494 aa7.22□□□□□ -1.25
CLCN3-201ENST00000347613 NCOA5Q9HCD5 579 aaKnown RBP7.22□□□□□ -1.25
CLCN3-201ENST00000347613 CABP4P57796 275 aa7.22□□□□□ -1.25
CLCN3-201ENST00000347613 Q6ZUG5 572 aa7.22□□□□□ -1.25
CLCN3-201ENST00000347613 BRINP3Q76B58 766 aa7.22□□□□□ -1.25
CLCN3-201ENST00000347613 ZKSCAN5Q9Y2L8 839 aa7.22□□□□□ -1.25
CLCN3-201ENST00000347613 R3HCC1Q9Y3T6 440 aaKnown RBP7.22□□□□□ -1.25
CLCN3-201ENST00000347613 M0R2C6 588 aa7.22□□□□□ -1.25
CLCN3-201ENST00000347613 GOLIM4O00461 696 aa7.22□□□□□ -1.25
CLCN3-201ENST00000347613 MBD3O95983 291 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms