RNA–Protein interactions for RNA: ENST00000346798.7

APP-201, Transcript of amyloid beta precursor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APP, Length 3,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-201ENST00000346798 CCDC186Q7Z3E2 898 aa14.04□□□□□ -0.16
APP-201ENST00000346798 UBE3BQ7Z3V4 1068 aa14.04□□□□□ -0.16
APP-201ENST00000346798 NLRP2Q9NX02 1062 aa14.04□□□□□ -0.16
APP-201ENST00000346798 NR1I2O75469 434 aa14.04□□□□□ -0.16
APP-201ENST00000346798 PDCP20941 246 aa14.04□□□□□ -0.16
APP-201ENST00000346798 AMOTQ4VCS5 1084 aa14.04□□□□□ -0.16
APP-201ENST00000346798 NFATC2IPQ8NCF5 419 aa14.04□□□□□ -0.16
APP-201ENST00000346798 KCNH5Q8NCM2 988 aa14.04□□□□□ -0.16
APP-201ENST00000346798 FAM200AQ8TCP9 573 aa14.04□□□□□ -0.16
APP-201ENST00000346798 DNAJC25Q9H1X3 360 aa14.04□□□□□ -0.16
APP-201ENST00000346798 HIP1O00291 1037 aa14.03□□□□□ -0.16
APP-201ENST00000346798 TFCP2Q12800 502 aa14.03□□□□□ -0.16
APP-201ENST00000346798 BRF1Q92994 677 aa14.03□□□□□ -0.16
APP-201ENST00000346798 HDAC5Q9UQL6 1122 aa14.03□□□□□ -0.16
APP-201ENST00000346798 KIF3AQ9Y496 699 aa14.03□□□□□ -0.16
APP-201ENST00000346798 Q6ZUG5 572 aa14.03□□□□□ -0.16
APP-201ENST00000346798 DDX21Q9NR30 783 aaKnown RBP eCLIP14.03□□□□□ -0.16
APP-201ENST00000346798 GOLGA6L6A8MZA4 724 aa14.03□□□□□ -0.16
APP-201ENST00000346798 CBX1P83916 185 aa14.03□□□□□ -0.16
APP-201ENST00000346798 GUCY1B3Q02153 619 aa14.03□□□□□ -0.16
APP-201ENST00000346798 CHAF1AQ13111 956 aaPredicted RBP14.03□□□□□ -0.16
APP-201ENST00000346798 LEO1Q8WVC0 666 aaPredicted RBP14.03□□□□□ -0.16
APP-201ENST00000346798 C16orf45Q96MC5 204 aaPredicted RBP14.03□□□□□ -0.16
APP-201ENST00000346798 NEUROD6Q96NK8 337 aa14.03□□□□□ -0.16
APP-201ENST00000346798 FTOQ9C0B1 505 aaKnown RBP eCLIP14.03□□□□□ -0.163e-6■□□□□ 10.9
APP-201ENST00000346798 CBX8Q9HC52 389 aa14.03□□□□□ -0.16
APP-201ENST00000346798 HMGN5P82970 282 aaKnown RBP14.02□□□□□ -0.16
APP-201ENST00000346798 DBNLQ9UJU6 430 aaKnown RBP14.02□□□□□ -0.16
APP-201ENST00000346798 CCT2P78371 535 aaKnown RBP14.02□□□□□ -0.17
APP-201ENST00000346798 ZNF710Q8N1W2 664 aa14.02□□□□□ -0.17
APP-201ENST00000346798 KIAA1524Q8TCG1 905 aa14.02□□□□□ -0.17
APP-201ENST00000346798 RGPD2P0DJD1 1756 aa14.02□□□□□ -0.17
APP-201ENST00000346798 TAF5LO75529 589 aa14.02□□□□□ -0.17
APP-201ENST00000346798 CHST3Q7LGC8 479 aa14.02□□□□□ -0.17
APP-201ENST00000346798 ERCC4Q92889 916 aaPredicted RBP14.02□□□□□ -0.17
APP-201ENST00000346798 PRIMPOLQ96LW4 560 aa14.02□□□□□ -0.17
APP-201ENST00000346798 DBNDD2Q9BQY9 259 aa14.02□□□□□ -0.17
APP-201ENST00000346798 NEURL1BA8MQ27 555 aa14.01□□□□□ -0.17
APP-201ENST00000346798 RIOK3O14730 519 aaKnown RBP14.01□□□□□ -0.17
APP-201ENST00000346798 ANKRD1Q15327 319 aa14.01□□□□□ -0.17
APP-201ENST00000346798 NEK1Q96PY6 1258 aa14.01□□□□□ -0.17
APP-201ENST00000346798 SCAND2PQ9GZW5 306 aaPredicted RBP14.01□□□□□ -0.17
APP-201ENST00000346798 SPDYE4A6NLX3 237 aa14.01□□□□□ -0.17
APP-201ENST00000346798 GCKRQ14397 625 aa14.01□□□□□ -0.17
APP-201ENST00000346798 LTN1O94822 1766 aa14.01□□□□□ -0.17
APP-201ENST00000346798 ZNF165P49910 485 aa14□□□□□ -0.17
APP-201ENST00000346798 PDIA6Q15084 440 aa14□□□□□ -0.17
APP-201ENST00000346798 PGBD1Q96JS3 809 aa14□□□□□ -0.17
APP-201ENST00000346798 USP16Q9Y5T5 823 aa14□□□□□ -0.17
APP-201ENST00000346798 CSB-PGBD3P0DP91 1061 aa14□□□□□ -0.17
APP-201ENST00000346798 ZNF790Q6PG37 636 aa14□□□□□ -0.17
APP-201ENST00000346798 ZNF592Q92610 1267 aa14□□□□□ -0.17
APP-201ENST00000346798 KCNB2Q92953 911 aa14□□□□□ -0.17
APP-201ENST00000346798 BCL2L12Q9HB09 334 aa14□□□□□ -0.17
APP-201ENST00000346798 ANKARQ7Z5J8 1434 aa14□□□□□ -0.17
APP-201ENST00000346798 RAPGEF4Q8WZA2 1011 aa14□□□□□ -0.17
APP-201ENST00000346798 ZNF496Q96IT1 587 aaPredicted RBP14□□□□□ -0.17
APP-201ENST00000346798 PPP4R3BQ5MIZ7 849 aa13.99□□□□□ -0.17
APP-201ENST00000346798 ARHGEF25Q86VW2 580 aa13.99□□□□□ -0.17
APP-201ENST00000346798 ANKRD13DQ6ZTN6 518 aa13.99□□□□□ -0.17
APP-201ENST00000346798 NCOA5Q9HCD5 579 aaKnown RBP13.99□□□□□ -0.17
APP-201ENST00000346798 NPHP3Q7Z494 1330 aa13.99□□□□□ -0.17
APP-201ENST00000346798 A0A087WZG4 1122 aa13.99□□□□□ -0.17
APP-201ENST00000346798 A0A0G2JLW4 131 aa13.99□□□□□ -0.17
APP-201ENST00000346798 CYP21A2P08686 494 aa13.99□□□□□ -0.17
APP-201ENST00000346798 TNNI3KQ59H18 835 aa13.99□□□□□ -0.17
APP-201ENST00000346798 MTERF4Q7Z6M4 381 aaKnown RBP13.99□□□□□ -0.17
APP-201ENST00000346798 SPTLC3Q9NUV7 552 aa13.99□□□□□ -0.17
APP-201ENST00000346798 FPGT-TNNI3KV9GXZ4 949 aa13.99□□□□□ -0.17
APP-201ENST00000346798 NPHP4O75161 1426 aaPredicted RBP13.98□□□□□ -0.17
APP-201ENST00000346798 COL15A1P39059 1388 aa13.98□□□□□ -0.17
APP-201ENST00000346798 GOLIM4O00461 696 aa13.98□□□□□ -0.17
APP-201ENST00000346798 APOBRQ0VD83 1088 aa13.98□□□□□ -0.17
APP-201ENST00000346798 DDX17Q92841 729 aaKnown RBP13.98□□□□□ -0.17
APP-201ENST00000346798 GTF3C6Q969F1 213 aa13.98□□□□□ -0.17
APP-201ENST00000346798 RAB11FIP4Q86YS3 637 aa13.97□□□□□ -0.17
APP-201ENST00000346798 TTC5Q8N0Z6 440 aa13.97□□□□□ -0.17
APP-201ENST00000346798 TIMM10P62072 90 aa13.97□□□□□ -0.17
APP-201ENST00000346798 SCRN1Q12765 414 aa13.97□□□□□ -0.17
APP-201ENST00000346798 CCDC94Q9BW85 323 aaPredicted RBP13.97□□□□□ -0.17
APP-201ENST00000346798 CLSTN2Q9H4D0 955 aa13.97□□□□□ -0.17
APP-201ENST00000346798 DDX19AQ9NUU7 478 aaKnown RBP13.97□□□□□ -0.17
APP-201ENST00000346798 CLIP2Q9UDT6 1046 aa13.97□□□□□ -0.17
APP-201ENST00000346798 GOLGA6L19H0YKK7 550 aa13.96□□□□□ -0.17
APP-201ENST00000346798 PTPN12Q05209 780 aaKnown RBP13.96□□□□□ -0.17
APP-201ENST00000346798 ARID5BQ14865 1188 aa13.96□□□□□ -0.17
APP-201ENST00000346798 HMG20BQ9P0W2 317 aa13.96□□□□□ -0.17
APP-201ENST00000346798 ZHX1Q9UKY1 873 aaPredicted RBP13.96□□□□□ -0.17
APP-201ENST00000346798 ZNF330Q9Y3S2 320 aaPredicted RBP13.96□□□□□ -0.17
APP-201ENST00000346798 MARF1Q9Y4F3 1742 aaKnown RBP13.96□□□□□ -0.17
APP-201ENST00000346798 MED23Q9ULK4 1368 aa13.96□□□□□ -0.17
APP-201ENST00000346798 LMBR1LQ6UX01 489 aa13.96□□□□□ -0.17
APP-201ENST00000346798 ANKLE2Q86XL3 938 aa13.96□□□□□ -0.17
APP-201ENST00000346798 CABLES1Q8TDN4 633 aa13.96□□□□□ -0.17
APP-201ENST00000346798 METTL22Q9BUU2 404 aaPredicted RBP13.96□□□□□ -0.17
APP-201ENST00000346798 FILIP1Q7Z7B0 1213 aa13.96□□□□□ -0.18
APP-201ENST00000346798 ELP1O95163 1332 aa13.96□□□□□ -0.18
APP-201ENST00000346798 ZNF75DP51815 510 aa13.95□□□□□ -0.18
APP-201ENST00000346798 CHRNA2Q15822 529 aa13.95□□□□□ -0.18
APP-201ENST00000346798 STOX1Q6ZVD7 989 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms