RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 CCDC85AQ96PX6 553 aaPredicted RBP20.6■□□□□ 0.89
RAB5C-201ENST00000346213 CWC25Q9NXE8 425 aaPredicted RBP20.6■□□□□ 0.89
RAB5C-201ENST00000346213 ATP6V0A2Q9Y487 856 aa20.6■□□□□ 0.89
RAB5C-201ENST00000346213 ZC3H4Q9UPT8 1303 aaKnown RBP20.6■□□□□ 0.89
RAB5C-201ENST00000346213 LTBP1Q14766 1721 aa20.59■□□□□ 0.89
RAB5C-201ENST00000346213 DDNO94850 711 aaPredicted RBP20.59■□□□□ 0.89
RAB5C-201ENST00000346213 CASP7P55210 303 aa20.59■□□□□ 0.89
RAB5C-201ENST00000346213 TRMT2AQ8IZ69 625 aaKnown RBP20.59■□□□□ 0.89
RAB5C-201ENST00000346213 PSMD1Q99460 953 aa20.59■□□□□ 0.89
RAB5C-201ENST00000346213 WDR90Q96KV7 1748 aa20.59■□□□□ 0.89
RAB5C-201ENST00000346213 DDX58O95786 925 aaKnown RBP20.58■□□□□ 0.89
RAB5C-201ENST00000346213 IARSP41252 1262 aaKnown RBP20.58■□□□□ 0.89
RAB5C-201ENST00000346213 RTKN2Q8IZC4 609 aa20.58■□□□□ 0.89
RAB5C-201ENST00000346213 FKBP5Q13451 457 aaPredicted RBP20.58■□□□□ 0.88
RAB5C-201ENST00000346213 POTEIP0CG38 1075 aa20.56■□□□□ 0.88
RAB5C-201ENST00000346213 POTEJP0CG39 1038 aa20.56■□□□□ 0.88
RAB5C-201ENST00000346213 DNAAF4Q8WXU2 420 aa20.56■□□□□ 0.88
RAB5C-201ENST00000346213 KDM2BQ8NHM5 1336 aa20.55■□□□□ 0.88
RAB5C-201ENST00000346213 H7C1W4 665 aa20.55■□□□□ 0.88
RAB5C-201ENST00000346213 DDX46Q7L014 1031 aaKnown RBP20.55■□□□□ 0.88
RAB5C-201ENST00000346213 CDHR2Q9BYE9 1310 aa20.55■□□□□ 0.88
RAB5C-201ENST00000346213 E9PSI1 815 aa20.54■□□□□ 0.88
RAB5C-201ENST00000346213 FZD9O00144 591 aa20.54■□□□□ 0.88
RAB5C-201ENST00000346213 GCKRQ14397 625 aa20.54■□□□□ 0.88
RAB5C-201ENST00000346213 AOC3Q16853 763 aa20.54■□□□□ 0.88
RAB5C-201ENST00000346213 BEND3Q5T5X7 828 aa20.54■□□□□ 0.88
RAB5C-201ENST00000346213 SP8Q8IXZ3 490 aa20.54■□□□□ 0.88
RAB5C-201ENST00000346213 MRPL50Q8N5N7 158 aaKnown RBP20.54■□□□□ 0.88
RAB5C-201ENST00000346213 GPR101Q96P66 508 aaPredicted RBP20.54■□□□□ 0.88
RAB5C-201ENST00000346213 BCL2L13Q9BXK5 485 aa20.54■□□□□ 0.88
RAB5C-201ENST00000346213 WTIPA6NIX2 430 aaPredicted RBP20.54■□□□□ 0.88
RAB5C-201ENST00000346213 UBE3BQ7Z3V4 1068 aa20.54■□□□□ 0.88
RAB5C-201ENST00000346213 RTFDC1Q9BY42 306 aaPredicted RBP20.54■□□□□ 0.88
RAB5C-201ENST00000346213 BBOX1O75936 387 aa20.53■□□□□ 0.88
RAB5C-201ENST00000346213 SSH1Q8WYL5 1049 aa20.53■□□□□ 0.88
RAB5C-201ENST00000346213 PDE8AO60658 829 aa20.52■□□□□ 0.88
RAB5C-201ENST00000346213 GPSM2P81274 684 aa20.52■□□□□ 0.88
RAB5C-201ENST00000346213 CC2D2BQ6DHV5 1058 aa20.52■□□□□ 0.88
RAB5C-201ENST00000346213 TOMM70O94826 608 aa20.51■□□□□ 0.87
RAB5C-201ENST00000346213 CTSWP56202 376 aa20.51■□□□□ 0.87
RAB5C-201ENST00000346213 TTLL11Q8NHH1 800 aa20.51■□□□□ 0.87
RAB5C-201ENST00000346213 CHMP4AQ9BY43 222 aa20.51■□□□□ 0.87
RAB5C-201ENST00000346213 GREM2Q9H772 168 aa20.51■□□□□ 0.87
RAB5C-201ENST00000346213 LINS1Q8NG48 757 aa20.51■□□□□ 0.87
RAB5C-201ENST00000346213 EPHA10Q5JZY3 1008 aa20.5■□□□□ 0.87
RAB5C-201ENST00000346213 POLLQ9UGP5 575 aa20.5■□□□□ 0.87
RAB5C-201ENST00000346213 NEXNQ0ZGT2 675 aa20.49■□□□□ 0.87
RAB5C-201ENST00000346213 DPP8Q6V1X1 898 aaPredicted RBP20.49■□□□□ 0.87
RAB5C-201ENST00000346213 MPNDQ8N594 471 aa20.49■□□□□ 0.87
RAB5C-201ENST00000346213 L3MBTL3Q96JM7 780 aaPredicted RBP20.49■□□□□ 0.87
RAB5C-201ENST00000346213 YDJCA8MPS7 323 aa20.48■□□□□ 0.87
RAB5C-201ENST00000346213 PPIP5K2O43314 1243 aa20.48■□□□□ 0.87
RAB5C-201ENST00000346213 RPS8P62241 208 aaKnown RBP20.48■□□□□ 0.87
RAB5C-201ENST00000346213 LARGE2Q8N3Y3 721 aa20.48■□□□□ 0.87
RAB5C-201ENST00000346213 CACNA1FO60840 1977 aa20.48■□□□□ 0.87
RAB5C-201ENST00000346213 HTRA3P83110 453 aa20.48■□□□□ 0.87
RAB5C-201ENST00000346213 SPEF2Q9C093 1822 aa20.47■□□□□ 0.87
RAB5C-201ENST00000346213 VEGFAP15692 232 aaPredicted RBP20.47■□□□□ 0.87
RAB5C-201ENST00000346213 FOXO4P98177 505 aa20.47■□□□□ 0.87
RAB5C-201ENST00000346213 FAM161AQ3B820 660 aa20.47■□□□□ 0.87
RAB5C-201ENST00000346213 RBM46Q8TBY0 533 aaKnown RBP20.47■□□□□ 0.87
RAB5C-201ENST00000346213 ADAMTSL1Q8N6G6 1762 aa20.47■□□□□ 0.87
RAB5C-201ENST00000346213 HSPA6P17066 643 aa20.46■□□□□ 0.87
RAB5C-201ENST00000346213 KIAA2012Q0VF49 1180 aa20.46■□□□□ 0.87
RAB5C-201ENST00000346213 CCDC152Q4G0S7 254 aa20.46■□□□□ 0.87
RAB5C-201ENST00000346213 KAZALD1Q96I82 304 aa20.46■□□□□ 0.87
RAB5C-201ENST00000346213 PLA2G12BQ9BX93 195 aa20.46■□□□□ 0.87
RAB5C-201ENST00000346213 DPY19L2Q6NUT2 758 aa20.45■□□□□ 0.86
RAB5C-201ENST00000346213 KCNQ5Q9NR82 932 aa20.45■□□□□ 0.86
RAB5C-201ENST00000346213 MYH3P11055 1940 aa20.45■□□□□ 0.86
RAB5C-201ENST00000346213 RTL9Q8NET4 1388 aa20.45■□□□□ 0.86
RAB5C-201ENST00000346213 CSF1RP07333 972 aa20.45■□□□□ 0.86
RAB5C-201ENST00000346213 SCNN1DP51172 638 aa20.45■□□□□ 0.86
RAB5C-201ENST00000346213 TBC1D16Q8TBP0 767 aa20.45■□□□□ 0.86
RAB5C-201ENST00000346213 NSFL1CQ9UNZ2 370 aaKnown RBP20.45■□□□□ 0.86
RAB5C-201ENST00000346213 TAF1DQ9H5J8 278 aaPredicted RBP20.44■□□□□ 0.86
RAB5C-201ENST00000346213 SHTN1A0MZ66 631 aa20.43■□□□□ 0.86
RAB5C-201ENST00000346213 CXCL9Q07325 125 aa20.43■□□□□ 0.86
RAB5C-201ENST00000346213 SLC4A10Q6U841 1118 aa20.43■□□□□ 0.86
RAB5C-201ENST00000346213 GRIPAP1Q4V328 841 aa20.42■□□□□ 0.86
RAB5C-201ENST00000346213 TMC4Q7Z404 712 aa20.42■□□□□ 0.86
RAB5C-201ENST00000346213 NIM1KQ8IY84 436 aa20.42■□□□□ 0.86
RAB5C-201ENST00000346213 JDP2Q8WYK2 163 aa20.42■□□□□ 0.86
RAB5C-201ENST00000346213 GJA3Q9Y6H8 435 aa20.42■□□□□ 0.86
RAB5C-201ENST00000346213 RIMBP2O15034 1052 aa20.42■□□□□ 0.86
RAB5C-201ENST00000346213 NBPF7P0C2Y1 421 aaPredicted RBP20.42■□□□□ 0.86
RAB5C-201ENST00000346213 EPS15P42566 896 aa20.42■□□□□ 0.86
RAB5C-201ENST00000346213 GPC2Q8N158 579 aa20.42■□□□□ 0.86
RAB5C-201ENST00000346213 SUCLG2Q96I99 432 aa20.42■□□□□ 0.86
RAB5C-201ENST00000346213 DBNDD1Q9H9R9 158 aa20.42■□□□□ 0.86
RAB5C-201ENST00000346213 PODXL2Q9NZ53 605 aa20.42■□□□□ 0.86
RAB5C-201ENST00000346213 TNNQ9UQP3 1299 aa20.42■□□□□ 0.86
RAB5C-201ENST00000346213 GRM8O00222 908 aa20.41■□□□□ 0.86
RAB5C-201ENST00000346213 RAD17O75943 681 aa20.41■□□□□ 0.86
RAB5C-201ENST00000346213 ITGA6P23229 1130 aa20.41■□□□□ 0.86
RAB5C-201ENST00000346213 SCN9AQ15858 1988 aa20.4■□□□□ 0.86
RAB5C-201ENST00000346213 SNAP23O00161 211 aa20.4■□□□□ 0.86
RAB5C-201ENST00000346213 KLRK1P26718 216 aa20.4■□□□□ 0.86
RAB5C-201ENST00000346213 DOK7Q18PE1 504 aa20.4■□□□□ 0.86
RAB5C-201ENST00000346213 ANKRD18AQ8IVF6 992 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms