RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 LINC00116Q8NCU8 138 aa30.69■■■□□ 2.5
TRADD-201ENST00000345057 UBN2Q6ZU65 1347 aa30.68■■■□□ 2.5
TRADD-201ENST00000345057 MAP4K4O95819 1239 aaPredicted RBP30.68■■■□□ 2.5
TRADD-201ENST00000345057 CTSWP56202 376 aa30.68■■■□□ 2.5
TRADD-201ENST00000345057 QTRT2Q9H974 415 aaKnown RBP30.68■■■□□ 2.5
TRADD-201ENST00000345057 ATP5JP18859 108 aa30.67■■■□□ 2.5
TRADD-201ENST00000345057 TLR7Q9NYK1 1049 aaKnown RBP30.67■■■□□ 2.5
TRADD-201ENST00000345057 MYH3P11055 1940 aa30.66■■■□□ 2.5
TRADD-201ENST00000345057 UTP14AQ9BVJ6 771 aaKnown RBP30.66■■■□□ 2.5
TRADD-201ENST00000345057 DIAPH3Q9NSV4 1193 aa30.66■■■□□ 2.5
TRADD-201ENST00000345057 DBNLQ9UJU6 430 aaKnown RBP30.66■■■□□ 2.5
TRADD-201ENST00000345057 SH3TC1Q8TE82 1336 aa30.66■■■□□ 2.5
TRADD-201ENST00000345057 TTLL11Q8NHH1 800 aa30.65■■■□□ 2.5
TRADD-201ENST00000345057 BCORQ6W2J9 1755 aa30.65■■■□□ 2.5
TRADD-201ENST00000345057 CEP126Q9P2H0 1117 aa30.65■■■□□ 2.5
TRADD-201ENST00000345057 AKAP2Q9Y2D5 859 aa30.65■■■□□ 2.5
TRADD-201ENST00000345057 ANKRD18BA2A2Z9 1011 aa30.64■■■□□ 2.5
TRADD-201ENST00000345057 ANO2Q9NQ90 1003 aa30.64■■■□□ 2.5
TRADD-201ENST00000345057 SBF2Q86WG5 1849 aa30.63■■■□□ 2.49
TRADD-201ENST00000345057 SGSM2O43147 1006 aa30.63■■■□□ 2.49
TRADD-201ENST00000345057 IL27Q8NEV9 243 aa30.63■■■□□ 2.49
TRADD-201ENST00000345057 ZNF594Q96JF6 807 aaPredicted RBP30.63■■■□□ 2.49
TRADD-201ENST00000345057 CCNL1Q9UK58 526 aaPredicted RBP30.63■■■□□ 2.49
TRADD-201ENST00000345057 ANAPC15P60006 121 aa30.62■■■□□ 2.49
TRADD-201ENST00000345057 LRRC24Q50LG9 513 aa30.62■■■□□ 2.49
TRADD-201ENST00000345057 BOLA2Q9H3K6 86 aa30.61■■■□□ 2.49
TRADD-201ENST00000345057 NIP7Q9Y221 180 aaKnown RBP eCLIP30.61■■■□□ 2.49
TRADD-201ENST00000345057 ZNF609O15014 1411 aa30.61■■■□□ 2.49
TRADD-201ENST00000345057 LY75O60449 1722 aa30.61■■■□□ 2.49
TRADD-201ENST00000345057 RPS6KA4O75676 772 aa30.61■■■□□ 2.49
TRADD-201ENST00000345057 ITGA6P23229 1130 aa30.61■■■□□ 2.49
TRADD-201ENST00000345057 SUSD4Q5VX71 490 aa30.61■■■□□ 2.49
TRADD-201ENST00000345057 KIAA1211Q6ZU35 1233 aa30.61■■■□□ 2.49
TRADD-201ENST00000345057 BCL11BQ9C0K0 894 aaPredicted RBP30.61■■■□□ 2.49
TRADD-201ENST00000345057 TICAM2Q86XR7 235 aa30.6■■■□□ 2.49
TRADD-201ENST00000345057 DBNDD2Q9BQY9 259 aa30.6■■■□□ 2.49
TRADD-201ENST00000345057 RFX7Q2KHR2 1363 aa30.59■■■□□ 2.49
TRADD-201ENST00000345057 PTF1AQ7RTS3 328 aa30.59■■■□□ 2.49
TRADD-201ENST00000345057 SYNE4Q8N205 404 aa30.59■■■□□ 2.49
TRADD-201ENST00000345057 NEUROD6Q96NK8 337 aa30.59■■■□□ 2.49
TRADD-201ENST00000345057 GREM2Q9H772 168 aa30.59■■■□□ 2.49
TRADD-201ENST00000345057 RAD50Q92878 1312 aa30.58■■■□□ 2.49
TRADD-201ENST00000345057 FAM182BQ5T319 152 aa30.58■■■□□ 2.49
TRADD-201ENST00000345057 CWC27Q6UX04 472 aaKnown RBP30.57■■■□□ 2.48
TRADD-201ENST00000345057 LDHAL6AQ6ZMR3 332 aa30.57■■■□□ 2.48
TRADD-201ENST00000345057 FSD1Q9BTV5 496 aa30.57■■■□□ 2.48
TRADD-201ENST00000345057 PUS3Q9BZE2 481 aaKnown RBP30.57■■■□□ 2.48
TRADD-201ENST00000345057 SCN7AQ01118 1682 aa30.56■■■□□ 2.48
TRADD-201ENST00000345057 A0A1B0GUL7 405 aa30.56■■■□□ 2.48
TRADD-201ENST00000345057 ST18O60284 1047 aa30.56■■■□□ 2.48
TRADD-201ENST00000345057 FAM196AQ6ZSG2 479 aa30.56■■■□□ 2.48
TRADD-201ENST00000345057 CCDC85AQ96PX6 553 aaPredicted RBP30.56■■■□□ 2.48
TRADD-201ENST00000345057 HAUS7Q99871 368 aa30.56■■■□□ 2.48
TRADD-201ENST00000345057 NTSR2O95665 410 aa30.55■■■□□ 2.48
TRADD-201ENST00000345057 HMGB2P26583 209 aaKnown RBP30.55■■■□□ 2.48
TRADD-201ENST00000345057 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.55■■■□□ 2.48
TRADD-201ENST00000345057 RTCBQ9Y3I0 505 aaKnown RBP30.55■■■□□ 2.48
TRADD-201ENST00000345057 LAMB2P55268 1798 aa30.55■■■□□ 2.48
TRADD-201ENST00000345057 IL17RAQ96F46 866 aa30.55■■■□□ 2.48
TRADD-201ENST00000345057 NARFQ9UHQ1 456 aa30.55■■■□□ 2.48
TRADD-201ENST00000345057 CNNM1Q9NRU3 951 aa30.54■■■□□ 2.48
TRADD-201ENST00000345057 K7ELQ4 463 aaPredicted RBP30.53■■■□□ 2.48
TRADD-201ENST00000345057 RXRBP28702 533 aa30.53■■■□□ 2.48
TRADD-201ENST00000345057 CCDC152Q4G0S7 254 aa30.53■■■□□ 2.48
TRADD-201ENST00000345057 RIPOR2Q9Y4F9 1068 aa30.53■■■□□ 2.48
TRADD-201ENST00000345057 RTL9Q8NET4 1388 aa30.53■■■□□ 2.48
TRADD-201ENST00000345057 GNPATO15228 680 aa30.53■■■□□ 2.48
TRADD-201ENST00000345057 TIMM10P62072 90 aa30.52■■■□□ 2.48
TRADD-201ENST00000345057 METTL24Q5JXM2 366 aa30.52■■■□□ 2.48
TRADD-201ENST00000345057 CCDC158Q5M9N0 1113 aa30.52■■■□□ 2.48
TRADD-201ENST00000345057 KRT27Q7Z3Y8 459 aa30.52■■■□□ 2.48
TRADD-201ENST00000345057 KCNQ4P56696 695 aa30.51■■■□□ 2.47
TRADD-201ENST00000345057 RBM6P78332 1123 aaKnown RBP30.51■■■□□ 2.47
TRADD-201ENST00000345057 TAF1LQ8IZX4 1826 aa30.51■■■□□ 2.47
TRADD-201ENST00000345057 ABCC12Q96J65 1359 aa30.51■■■□□ 2.47
TRADD-201ENST00000345057 ZPR1O75312 459 aa30.5■■■□□ 2.47
TRADD-201ENST00000345057 HSPA4P34932 840 aa30.5■■■□□ 2.47
TRADD-201ENST00000345057 SNRKQ9NRH2 765 aa30.5■■■□□ 2.47
TRADD-201ENST00000345057 LRP5O75197 1615 aa30.5■■■□□ 2.47
TRADD-201ENST00000345057 LSG1Q9H089 658 aaKnown RBP30.5■■■□□ 2.47
TRADD-201ENST00000345057 MROH5Q6ZUA9 1318 aa30.49■■■□□ 2.47
TRADD-201ENST00000345057 FAM177BA6PVY3 158 aa30.49■■■□□ 2.47
TRADD-201ENST00000345057 GORABQ5T7V8 394 aa30.49■■■□□ 2.47
TRADD-201ENST00000345057 IL25Q9H293 177 aa30.49■■■□□ 2.47
TRADD-201ENST00000345057 SPEF2Q9C093 1822 aa30.49■■■□□ 2.47
TRADD-201ENST00000345057 RIC1Q4ADV7 1423 aa30.49■■■□□ 2.47
TRADD-201ENST00000345057 HCLS1P14317 486 aaPredicted RBP30.48■■■□□ 2.47
TRADD-201ENST00000345057 DNAJC2Q99543 621 aaKnown RBP30.48■■■□□ 2.47
TRADD-201ENST00000345057 NYXQ9GZU5 481 aa30.48■■■□□ 2.47
TRADD-201ENST00000345057 DDX60Q8IY21 1712 aaKnown RBP30.48■■■□□ 2.47
TRADD-201ENST00000345057 ILDR2Q71H61 639 aa30.48■■■□□ 2.47
TRADD-201ENST00000345057 SLKQ9H2G2 1235 aaPredicted RBP30.48■■■□□ 2.47
TRADD-201ENST00000345057 C4BP0C0L5 1744 aa30.47■■■□□ 2.47
TRADD-201ENST00000345057 ANTXR1Q9H6X2 564 aa30.47■■■□□ 2.47
TRADD-201ENST00000345057 IFIT1P09914 478 aaKnown RBP30.46■■■□□ 2.47
TRADD-201ENST00000345057 MCM2P49736 904 aa30.46■■■□□ 2.47
TRADD-201ENST00000345057 NMIQ13287 307 aaPredicted RBP30.46■■■□□ 2.47
TRADD-201ENST00000345057 ATP2B3Q16720 1220 aa30.46■■■□□ 2.47
TRADD-201ENST00000345057 SLC27A3Q5K4L6 730 aa30.46■■■□□ 2.47
TRADD-201ENST00000345057 KBTBD3Q8NAB2 608 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms