RNA–Protein interactions for RNA: ENST00000344893.4

AC008543.1-201, humanhuman

TSL 2 BASIC

Gene AC008543.1, Length 3,383 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008543.1-201ENST00000344893 USP27XA6NNY8 438 aa10.63□□□□□ -0.71
AC008543.1-201ENST00000344893 ERC2O15083 957 aa10.63□□□□□ -0.71
AC008543.1-201ENST00000344893 SLU7O95391 586 aaKnown RBP10.63□□□□□ -0.71
AC008543.1-201ENST00000344893 PNMA6AP0CW24 399 aaPredicted RBP10.63□□□□□ -0.71
AC008543.1-201ENST00000344893 ST5P78524 1137 aa10.63□□□□□ -0.71
AC008543.1-201ENST00000344893 PTPN14Q15678 1187 aa10.63□□□□□ -0.71
AC008543.1-201ENST00000344893 ZSCAN26Q16670 478 aa10.63□□□□□ -0.71
AC008543.1-201ENST00000344893 AKAP4Q5JQC9 854 aa10.63□□□□□ -0.71
AC008543.1-201ENST00000344893 CERKQ8TCT0 537 aa10.63□□□□□ -0.71
AC008543.1-201ENST00000344893 CACTINQ8WUQ7 758 aaKnown RBP10.63□□□□□ -0.71
AC008543.1-201ENST00000344893 CHL1O00533 1208 aa10.63□□□□□ -0.71
AC008543.1-201ENST00000344893 GUCY2CP25092 1073 aa10.63□□□□□ -0.71
AC008543.1-201ENST00000344893 FAM200AQ8TCP9 573 aa10.63□□□□□ -0.71
AC008543.1-201ENST00000344893 TRIM5Q9C035 493 aa10.63□□□□□ -0.71
AC008543.1-201ENST00000344893 H2AFXP16104 143 aaPredicted RBP10.62□□□□□ -0.71
AC008543.1-201ENST00000344893 CLCN6P51797 869 aa10.62□□□□□ -0.71
AC008543.1-201ENST00000344893 BRPF1P55201 1214 aaPredicted RBP10.62□□□□□ -0.71
AC008543.1-201ENST00000344893 ERCC6LQ2NKX8 1250 aa10.62□□□□□ -0.71
AC008543.1-201ENST00000344893 SMARCE1Q969G3 411 aa10.62□□□□□ -0.71
AC008543.1-201ENST00000344893 ZNF622Q969S3 477 aaKnown RBP eCLIP10.62□□□□□ -0.715e-7■■□□□ 13.7
AC008543.1-201ENST00000344893 TPM4P67936 248 aa10.62□□□□□ -0.71
AC008543.1-201ENST00000344893 AMOTQ4VCS5 1084 aa10.62□□□□□ -0.71
AC008543.1-201ENST00000344893 SMIM5Q71RC9 77 aa10.62□□□□□ -0.71
AC008543.1-201ENST00000344893 AKAP12Q02952 1782 aa10.62□□□□□ -0.71
AC008543.1-201ENST00000344893 PROSER3Q2NL68 480 aa10.62□□□□□ -0.71
AC008543.1-201ENST00000344893 NCBP3Q53F19 620 aaKnown RBP10.62□□□□□ -0.71
AC008543.1-201ENST00000344893 ZNF496Q96IT1 587 aaPredicted RBP10.62□□□□□ -0.71
AC008543.1-201ENST00000344893 BRMS1Q9HCU9 246 aa10.62□□□□□ -0.71
AC008543.1-201ENST00000344893 EXOC6BQ9Y2D4 811 aa10.62□□□□□ -0.71
AC008543.1-201ENST00000344893 EXOC5O00471 708 aa10.61□□□□□ -0.71
AC008543.1-201ENST00000344893 PHKG2P15735 406 aa10.61□□□□□ -0.71
AC008543.1-201ENST00000344893 CT47A1Q5JQC4 288 aaPredicted RBP10.61□□□□□ -0.71
AC008543.1-201ENST00000344893 RNF20Q5VTR2 975 aa10.61□□□□□ -0.71
AC008543.1-201ENST00000344893 CNPY4Q8N129 248 aa10.61□□□□□ -0.71
AC008543.1-201ENST00000344893 BANK1Q8NDB2 785 aa10.61□□□□□ -0.71
AC008543.1-201ENST00000344893 DRC1Q96MC2 740 aa10.61□□□□□ -0.71
AC008543.1-201ENST00000344893 ATG3Q9NT62 314 aa10.61□□□□□ -0.71
AC008543.1-201ENST00000344893 JRKLQ9Y4A0 524 aa10.61□□□□□ -0.71
AC008543.1-201ENST00000344893 RPAP1Q9BWH6 1393 aaPredicted RBP10.61□□□□□ -0.71
AC008543.1-201ENST00000344893 ALDH1L2Q3SY69 923 aa10.61□□□□□ -0.71
AC008543.1-201ENST00000344893 GOLGA6L1Q8N7Z2 621 aa10.61□□□□□ -0.71
AC008543.1-201ENST00000344893 CWC15Q9P013 229 aaKnown RBP10.61□□□□□ -0.71
AC008543.1-201ENST00000344893 CCDC171Q6TFL3 1326 aa10.61□□□□□ -0.71
AC008543.1-201ENST00000344893 WDR17Q8IZU2 1322 aa10.61□□□□□ -0.71
AC008543.1-201ENST00000344893 GPS2Q13227 327 aa10.6□□□□□ -0.71
AC008543.1-201ENST00000344893 SRLQ86TD4 932 aa10.6□□□□□ -0.71
AC008543.1-201ENST00000344893 MRPL50Q8N5N7 158 aaKnown RBP10.6□□□□□ -0.71
AC008543.1-201ENST00000344893 CCDC85AQ96PX6 553 aaPredicted RBP10.6□□□□□ -0.71
AC008543.1-201ENST00000344893 TRMT1Q9NXH9 659 aaKnown RBP10.6□□□□□ -0.71
AC008543.1-201ENST00000344893 ZNF75DP51815 510 aa10.6□□□□□ -0.71
AC008543.1-201ENST00000344893 CLIP2Q9UDT6 1046 aa10.6□□□□□ -0.71
AC008543.1-201ENST00000344893 RRP15Q9Y3B9 282 aaKnown RBP10.6□□□□□ -0.71
AC008543.1-201ENST00000344893 USP16Q9Y5T5 823 aa10.6□□□□□ -0.71
AC008543.1-201ENST00000344893 CCDC144BQ3MJ40 725 aa10.6□□□□□ -0.71
AC008543.1-201ENST00000344893 NYAP1Q6ZVC0 841 aa10.6□□□□□ -0.71
AC008543.1-201ENST00000344893 CCDC144CPQ8IYA2 1237 aa10.6□□□□□ -0.71
AC008543.1-201ENST00000344893 UPF3BQ9BZI7 483 aaKnown RBP10.6□□□□□ -0.71
AC008543.1-201ENST00000344893 PXDNQ92626 1479 aa10.59□□□□□ -0.71
AC008543.1-201ENST00000344893 ZCCHC17Q9NP64 241 aaKnown RBP10.59□□□□□ -0.71
AC008543.1-201ENST00000344893 TMOD3Q9NYL9 352 aa10.59□□□□□ -0.71
AC008543.1-201ENST00000344893 PALD1Q9ULE6 856 aa10.59□□□□□ -0.71
AC008543.1-201ENST00000344893 ASAP1Q9ULH1 1129 aa10.59□□□□□ -0.71
AC008543.1-201ENST00000344893 ATP5J2-PTCD1G3V325 749 aa10.59□□□□□ -0.71
AC008543.1-201ENST00000344893 ZSCAN22P10073 491 aaPredicted RBP10.59□□□□□ -0.71
AC008543.1-201ENST00000344893 FLIIQ13045 1269 aa10.59□□□□□ -0.71
AC008543.1-201ENST00000344893 SART3Q15020 963 aaKnown RBP10.59□□□□□ -0.71
AC008543.1-201ENST00000344893 DDB1Q16531 1140 aa10.59□□□□□ -0.71
AC008543.1-201ENST00000344893 CCDC30Q5VVM6 783 aa10.59□□□□□ -0.71
AC008543.1-201ENST00000344893 DCTPP1Q9H773 170 aa10.59□□□□□ -0.71
AC008543.1-201ENST00000344893 CHMP3Q9Y3E7 222 aa10.59□□□□□ -0.71
AC008543.1-201ENST00000344893 MRVI1Q9Y6F6 885 aa10.59□□□□□ -0.71
AC008543.1-201ENST00000344893 TOPAZ1Q8N9V7 1692 aa10.59□□□□□ -0.71
AC008543.1-201ENST00000344893 EP400Q96L91 3159 aa10.59□□□□□ -0.71
AC008543.1-201ENST00000344893 PI4KAP2A4QPH2 592 aa10.59□□□□□ -0.71
AC008543.1-201ENST00000344893 PLA2G4DQ86XP0 818 aa10.59□□□□□ -0.71
AC008543.1-201ENST00000344893 PI4KAP1Q8N8J0 262 aa10.59□□□□□ -0.71
AC008543.1-201ENST00000344893 MEIS3Q99687 375 aa10.59□□□□□ -0.71
AC008543.1-201ENST00000344893 CBX8Q9HC52 389 aa10.59□□□□□ -0.71
AC008543.1-201ENST00000344893 BCCIPQ9P287 314 aaKnown RBP eCLIP10.59□□□□□ -0.71
AC008543.1-201ENST00000344893 USP21Q9UK80 565 aa10.59□□□□□ -0.71
AC008543.1-201ENST00000344893 A0A1B0GUL7 405 aa10.58□□□□□ -0.72
AC008543.1-201ENST00000344893 A1BGP04217 495 aa10.58□□□□□ -0.72
AC008543.1-201ENST00000344893 ZNF853P0CG23 659 aa10.58□□□□□ -0.72
AC008543.1-201ENST00000344893 TYRO3Q06418 890 aa10.58□□□□□ -0.72
AC008543.1-201ENST00000344893 ARID5BQ14865 1188 aa10.58□□□□□ -0.72
AC008543.1-201ENST00000344893 CAMK4Q16566 473 aa10.58□□□□□ -0.72
AC008543.1-201ENST00000344893 ARHGAP29Q52LW3 1261 aa10.58□□□□□ -0.72
AC008543.1-201ENST00000344893 ZBTB3Q9H5J0 574 aa10.58□□□□□ -0.72
AC008543.1-201ENST00000344893 ZNF790Q6PG37 636 aa10.58□□□□□ -0.72
AC008543.1-201ENST00000344893 TMCO3Q6UWJ1 677 aa10.58□□□□□ -0.72
AC008543.1-201ENST00000344893 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.58□□□□□ -0.72
AC008543.1-201ENST00000344893 LRRC8AQ8IWT6 810 aa10.58□□□□□ -0.72
AC008543.1-201ENST00000344893 LRRN4CLQ8ND94 238 aa10.58□□□□□ -0.72
AC008543.1-201ENST00000344893 CEP83Q9Y592 693 aa10.58□□□□□ -0.72
AC008543.1-201ENST00000344893 IL16Q14005 1332 aa10.57□□□□□ -0.72
AC008543.1-201ENST00000344893 MEGF6O75095 1541 aa10.57□□□□□ -0.72
AC008543.1-201ENST00000344893 KCNQ2O43526 872 aa10.57□□□□□ -0.72
AC008543.1-201ENST00000344893 TTC31Q49AM3 519 aaPredicted RBP10.57□□□□□ -0.72
AC008543.1-201ENST00000344893 RIC3Q7Z5B4 369 aa10.57□□□□□ -0.72
AC008543.1-201ENST00000344893 FBXO18Q8NFZ0 1043 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms