RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 CARMIL3Q8ND23 1372 aa20.2■□□□□ 0.82
CEACAM1-202ENST00000344391 PNPLA7Q6ZV29 1317 aa20.2■□□□□ 0.82
CEACAM1-202ENST00000344391 FAM161AQ3B820 660 aa20.2■□□□□ 0.82
CEACAM1-202ENST00000344391 ERFEQ4G0M1 354 aa20.2■□□□□ 0.82
CEACAM1-202ENST00000344391 NBPF5PQ86XG9 351 aaPredicted RBP20.2■□□□□ 0.82
CEACAM1-202ENST00000344391 C16orf71Q8IYS4 520 aaPredicted RBP20.2■□□□□ 0.82
CEACAM1-202ENST00000344391 SIL1Q9H173 461 aa20.2■□□□□ 0.82
CEACAM1-202ENST00000344391 TM4SF1P30408 202 aa20.19■□□□□ 0.82
CEACAM1-202ENST00000344391 SLC15A2Q16348 729 aa20.19■□□□□ 0.82
CEACAM1-202ENST00000344391 CCDC57Q2TAC2 916 aa20.19■□□□□ 0.82
CEACAM1-202ENST00000344391 SLC10A5Q5PT55 438 aa20.19■□□□□ 0.82
CEACAM1-202ENST00000344391 TPTE2Q6XPS3 522 aa20.19■□□□□ 0.82
CEACAM1-202ENST00000344391 CASZ1Q86V15 1759 aa20.19■□□□□ 0.82
CEACAM1-202ENST00000344391 SASH1O94885 1247 aa20.18■□□□□ 0.82
CEACAM1-202ENST00000344391 CCDC85AQ96PX6 553 aaPredicted RBP20.18■□□□□ 0.82
CEACAM1-202ENST00000344391 GREM2Q9H772 168 aa20.18■□□□□ 0.82
CEACAM1-202ENST00000344391 STK32BQ9NY57 414 aa20.18■□□□□ 0.82
CEACAM1-202ENST00000344391 GTF2E1P29083 439 aaPredicted RBP20.17■□□□□ 0.82
CEACAM1-202ENST00000344391 IFIT5Q13325 482 aaKnown RBP20.17■□□□□ 0.82
CEACAM1-202ENST00000344391 PLEKHM2Q8IWE5 1019 aa20.17■□□□□ 0.82
CEACAM1-202ENST00000344391 IL1RAPL2Q9NP60 686 aa20.17■□□□□ 0.82
CEACAM1-202ENST00000344391 OTUD7AQ8TE49 926 aaPredicted RBP20.16■□□□□ 0.82
CEACAM1-202ENST00000344391 ZNF594Q96JF6 807 aaPredicted RBP20.16■□□□□ 0.82
CEACAM1-202ENST00000344391 BCL11AQ9H165 835 aa20.16■□□□□ 0.82
CEACAM1-202ENST00000344391 ABCC12Q96J65 1359 aa20.16■□□□□ 0.82
CEACAM1-202ENST00000344391 MSH5O43196 834 aa20.16■□□□□ 0.82
CEACAM1-202ENST00000344391 ITGA6P23229 1130 aa20.16■□□□□ 0.82
CEACAM1-202ENST00000344391 SALL3Q9BXA9 1300 aa20.15■□□□□ 0.82
CEACAM1-202ENST00000344391 ANKRD18BA2A2Z9 1011 aa20.15■□□□□ 0.82
CEACAM1-202ENST00000344391 ATG9AQ7Z3C6 839 aa20.15■□□□□ 0.82
CEACAM1-202ENST00000344391 NLGN1Q8N2Q7 840 aa20.15■□□□□ 0.82
CEACAM1-202ENST00000344391 FBXO3Q9UK99 471 aa20.15■□□□□ 0.82
CEACAM1-202ENST00000344391 RTL9Q8NET4 1388 aa20.15■□□□□ 0.82
CEACAM1-202ENST00000344391 EYA2O00167 538 aa20.14■□□□□ 0.81
CEACAM1-202ENST00000344391 CIAO1O76071 339 aa20.14■□□□□ 0.81
CEACAM1-202ENST00000344391 SF3B3Q15393 1217 aaKnown RBP20.14■□□□□ 0.81
CEACAM1-202ENST00000344391 CCDC152Q4G0S7 254 aa20.14■□□□□ 0.81
CEACAM1-202ENST00000344391 IL15P40933 162 aaPredicted RBP20.13■□□□□ 0.81
CEACAM1-202ENST00000344391 CLASRPQ8N2M8 674 aaKnown RBP20.13■□□□□ 0.81
CEACAM1-202ENST00000344391 SERPINB2P05120 415 aa20.13■□□□□ 0.81
CEACAM1-202ENST00000344391 DDR1Q08345 913 aa20.13■□□□□ 0.81
CEACAM1-202ENST00000344391 LRRC24Q50LG9 513 aa20.13■□□□□ 0.81
CEACAM1-202ENST00000344391 TAF7LQ5H9L4 462 aa20.13■□□□□ 0.81
CEACAM1-202ENST00000344391 C3orf67Q6ZVT6 689 aa20.13■□□□□ 0.81
CEACAM1-202ENST00000344391 PUS3Q9BZE2 481 aaKnown RBP20.13■□□□□ 0.81
CEACAM1-202ENST00000344391 OSBPL3Q9H4L5 887 aa20.13■□□□□ 0.81
CEACAM1-202ENST00000344391 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.13■□□□□ 0.81
CEACAM1-202ENST00000344391 POLRMTO00411 1230 aaKnown RBP20.12■□□□□ 0.81
CEACAM1-202ENST00000344391 PRR5LQ6MZQ0 368 aa20.12■□□□□ 0.81
CEACAM1-202ENST00000344391 CNBD1Q8NA66 436 aa20.12■□□□□ 0.81
CEACAM1-202ENST00000344391 PDE1AP54750 535 aa20.11■□□□□ 0.81
CEACAM1-202ENST00000344391 TFCP2Q12800 502 aa20.11■□□□□ 0.81
CEACAM1-202ENST00000344391 CCDC24Q8N4L8 307 aa20.11■□□□□ 0.81
CEACAM1-202ENST00000344391 NLRP3Q96P20 1036 aa20.11■□□□□ 0.81
CEACAM1-202ENST00000344391 RIC1Q4ADV7 1423 aa20.11■□□□□ 0.81
CEACAM1-202ENST00000344391 TNRC6CQ9HCJ0 1690 aaKnown RBP20.1■□□□□ 0.81
CEACAM1-202ENST00000344391 NPHP1O15259 732 aa20.1■□□□□ 0.81
CEACAM1-202ENST00000344391 MX1P20591 662 aa20.1■□□□□ 0.81
CEACAM1-202ENST00000344391 SEC31BQ9NQW1 1179 aa20.1■□□□□ 0.81
CEACAM1-202ENST00000344391 STAP2Q9UGK3 403 aa20.1■□□□□ 0.81
CEACAM1-202ENST00000344391 LRP5O75197 1615 aa20.1■□□□□ 0.81
CEACAM1-202ENST00000344391 NRXN2Q9P2S2 1712 aa20.09■□□□□ 0.81
CEACAM1-202ENST00000344391 LDHAL6AQ6ZMR3 332 aa20.09■□□□□ 0.81
CEACAM1-202ENST00000344391 EAF2Q96CJ1 260 aaPredicted RBP20.09■□□□□ 0.81
CEACAM1-202ENST00000344391 BMP2KLQ5H9B9 411 aa20.09■□□□□ 0.81
CEACAM1-202ENST00000344391 AACSQ86V21 672 aa20.09■□□□□ 0.81
CEACAM1-202ENST00000344391 RIPOR2Q9Y4F9 1068 aa20.09■□□□□ 0.81
CEACAM1-202ENST00000344391 SPEF2Q9C093 1822 aa20.08■□□□□ 0.8
CEACAM1-202ENST00000344391 TTC22Q5TAA0 569 aa20.08■□□□□ 0.8
CEACAM1-202ENST00000344391 GPR108Q9NPR9 543 aa20.08■□□□□ 0.8
CEACAM1-202ENST00000344391 TAF1P21675 1872 aa20.08■□□□□ 0.8
CEACAM1-202ENST00000344391 IFIT2P09913 472 aaKnown RBP20.07■□□□□ 0.8
CEACAM1-202ENST00000344391 ST5P78524 1137 aa20.07■□□□□ 0.8
CEACAM1-202ENST00000344391 TNNI3KQ59H18 835 aa20.07■□□□□ 0.8
CEACAM1-202ENST00000344391 UPF1Q92900 1129 aaKnown RBP eCLIP20.07■□□□□ 0.8
CEACAM1-202ENST00000344391 FPGT-TNNI3KV9GXZ4 949 aa20.07■□□□□ 0.8
CEACAM1-202ENST00000344391 AOX1Q06278 1338 aa20.07■□□□□ 0.8
CEACAM1-202ENST00000344391 GSPT1P15170 499 aaKnown RBP20.06■□□□□ 0.8
CEACAM1-202ENST00000344391 CNNM1Q9NRU3 951 aa20.06■□□□□ 0.8
CEACAM1-202ENST00000344391 CEP126Q9P2H0 1117 aa20.06■□□□□ 0.8
CEACAM1-202ENST00000344391 COL4A1P02462 1669 aa20.06■□□□□ 0.8
CEACAM1-202ENST00000344391 MMP10P09238 476 aa20.05■□□□□ 0.8
CEACAM1-202ENST00000344391 C8orf34Q49A92 452 aa20.05■□□□□ 0.8
CEACAM1-202ENST00000344391 MSL1Q68DK7 614 aa20.05■□□□□ 0.8
CEACAM1-202ENST00000344391 CDC5LQ99459 802 aaKnown RBP20.05■□□□□ 0.8
CEACAM1-202ENST00000344391 BACH2Q9BYV9 841 aa20.05■□□□□ 0.8
CEACAM1-202ENST00000344391 CCDC8Q9H0W5 538 aaPredicted RBP20.05■□□□□ 0.8
CEACAM1-202ENST00000344391 IGHMBP2P38935 993 aaKnown RBP20.05■□□□□ 0.8
CEACAM1-202ENST00000344391 TSHZ3Q63HK5 1081 aa20.05■□□□□ 0.8
CEACAM1-202ENST00000344391 MPHOSPH8Q99549 860 aa20.05■□□□□ 0.8
CEACAM1-202ENST00000344391 TTC41PQ6P2S7 1318 aa20.05■□□□□ 0.8
CEACAM1-202ENST00000344391 TLR7Q9NYK1 1049 aaKnown RBP20.04■□□□□ 0.8
CEACAM1-202ENST00000344391 PARP3Q9Y6F1 533 aa20.04■□□□□ 0.8
CEACAM1-202ENST00000344391 ANKRD31Q8N7Z5 1873 aa20.03■□□□□ 0.8
CEACAM1-202ENST00000344391 METTL24Q5JXM2 366 aa20.03■□□□□ 0.8
CEACAM1-202ENST00000344391 PI4K2BQ8TCG2 481 aa20.03■□□□□ 0.8
CEACAM1-202ENST00000344391 ECHDC1Q9NTX5 307 aa20.03■□□□□ 0.8
CEACAM1-202ENST00000344391 MROH5Q6ZUA9 1318 aa20.03■□□□□ 0.8
CEACAM1-202ENST00000344391 ZNF609O15014 1411 aa20.03■□□□□ 0.8
CEACAM1-202ENST00000344391 ANKRD18AQ8IVF6 992 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms