RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 NYXQ9GZU5 481 aa17.11■□□□□ 0.33
HERPUD1-202ENST00000344114 ABT1Q9ULW3 272 aaKnown RBP17.11■□□□□ 0.33
HERPUD1-202ENST00000344114 IBTKQ9P2D0 1353 aaPredicted RBP17.1■□□□□ 0.33
HERPUD1-202ENST00000344114 IPO8O15397 1037 aaKnown RBP17.1■□□□□ 0.33
HERPUD1-202ENST00000344114 GTF2E1P29083 439 aaPredicted RBP17.1■□□□□ 0.33
HERPUD1-202ENST00000344114 SCNN1DP51172 638 aa17.1■□□□□ 0.33
HERPUD1-202ENST00000344114 BABAM1Q9NWV8 329 aa17.1■□□□□ 0.33
HERPUD1-202ENST00000344114 ERVV-1B6SEH8 477 aa17.09■□□□□ 0.33
HERPUD1-202ENST00000344114 SLC34A2O95436 690 aa17.09■□□□□ 0.33
HERPUD1-202ENST00000344114 HOXA10P31260 410 aaPredicted RBP17.09■□□□□ 0.33
HERPUD1-202ENST00000344114 GRIPAP1Q4V328 841 aa17.09■□□□□ 0.33
HERPUD1-202ENST00000344114 NUTM1Q86Y26 1132 aa17.09■□□□□ 0.33
HERPUD1-202ENST00000344114 LMOD1P29536 600 aaPredicted RBP17.08■□□□□ 0.32
HERPUD1-202ENST00000344114 TAF7Q15545 349 aaPredicted RBP17.08■□□□□ 0.32
HERPUD1-202ENST00000344114 DZIP1LQ8IYY4 767 aaKnown RBP17.08■□□□□ 0.32
HERPUD1-202ENST00000344114 PANK1Q8TE04 598 aa17.08■□□□□ 0.32
HERPUD1-202ENST00000344114 GJA3Q9Y6H8 435 aa17.08■□□□□ 0.32
HERPUD1-202ENST00000344114 EPS15P42566 896 aa17.07■□□□□ 0.32
HERPUD1-202ENST00000344114 ECE1P42892 770 aa17.07■□□□□ 0.32
HERPUD1-202ENST00000344114 FMR1Q06787 632 aaKnown RBP eCLIP17.07■□□□□ 0.32
HERPUD1-202ENST00000344114 ATF7IPQ6VMQ6 1270 aa17.07■□□□□ 0.32
HERPUD1-202ENST00000344114 USP50Q70EL3 339 aaPredicted RBP17.07■□□□□ 0.32
HERPUD1-202ENST00000344114 FTSJ3Q8IY81 847 aaKnown RBP17.07■□□□□ 0.32
HERPUD1-202ENST00000344114 TSPYL6Q8N831 410 aa17.07■□□□□ 0.32
HERPUD1-202ENST00000344114 CAPNS2Q96L46 248 aa17.07■□□□□ 0.32
HERPUD1-202ENST00000344114 TSPYL4Q9UJ04 414 aa17.07■□□□□ 0.32
HERPUD1-202ENST00000344114 MAP3K15Q6ZN16 1313 aa17.07■□□□□ 0.32
HERPUD1-202ENST00000344114 FAM161AQ3B820 660 aa17.06■□□□□ 0.32
HERPUD1-202ENST00000344114 CST9Q5W186 159 aa17.06■□□□□ 0.32
HERPUD1-202ENST00000344114 LARGE2Q8N3Y3 721 aa17.06■□□□□ 0.32
HERPUD1-202ENST00000344114 C8orf58Q8NAV2 365 aa17.06■□□□□ 0.32
HERPUD1-202ENST00000344114 COG6Q9Y2V7 657 aa17.06■□□□□ 0.32
HERPUD1-202ENST00000344114 UBN2Q6ZU65 1347 aa17.06■□□□□ 0.32
HERPUD1-202ENST00000344114 TRIM27P14373 513 aa17.05■□□□□ 0.32
HERPUD1-202ENST00000344114 MVPQ14764 893 aaKnown RBP17.05■□□□□ 0.32
HERPUD1-202ENST00000344114 CYP4F22Q6NT55 531 aa17.05■□□□□ 0.32
HERPUD1-202ENST00000344114 MRPL50Q8N5N7 158 aaKnown RBP17.05■□□□□ 0.32
HERPUD1-202ENST00000344114 ARHGAP45Q92619 1136 aa17.05■□□□□ 0.32
HERPUD1-202ENST00000344114 RPGRQ92834 1020 aaKnown RBP17.05■□□□□ 0.32
HERPUD1-202ENST00000344114 CRAMP1Q96RY5 1269 aa17.05■□□□□ 0.32
HERPUD1-202ENST00000344114 TLL2Q9Y6L7 1015 aa17.05■□□□□ 0.32
HERPUD1-202ENST00000344114 RLBP1P12271 317 aa17.04■□□□□ 0.32
HERPUD1-202ENST00000344114 SLC51AQ86UW1 340 aa17.04■□□□□ 0.32
HERPUD1-202ENST00000344114 CLUAP1Q96AJ1 413 aa17.04■□□□□ 0.32
HERPUD1-202ENST00000344114 GPR101Q96P66 508 aaPredicted RBP17.04■□□□□ 0.32
HERPUD1-202ENST00000344114 MIS18AQ9NYP9 233 aa17.04■□□□□ 0.32
HERPUD1-202ENST00000344114 NOB1Q9ULX3 412 aaKnown RBP17.04■□□□□ 0.32
HERPUD1-202ENST00000344114 PPEF1O14829 653 aaPredicted RBP17.03■□□□□ 0.32
HERPUD1-202ENST00000344114 RGS19P49795 217 aa17.03■□□□□ 0.32
HERPUD1-202ENST00000344114 SUSD4Q5VX71 490 aa17.03■□□□□ 0.32
HERPUD1-202ENST00000344114 TTLL7Q6ZT98 887 aa17.03■□□□□ 0.32
HERPUD1-202ENST00000344114 CENPQQ7L2Z9 268 aaPredicted RBP17.03■□□□□ 0.32
HERPUD1-202ENST00000344114 RBM17Q96I25 401 aaKnown RBP17.03■□□□□ 0.32
HERPUD1-202ENST00000344114 TRAF5O00463 557 aa17.02■□□□□ 0.32
HERPUD1-202ENST00000344114 NTSR2O95665 410 aa17.02■□□□□ 0.32
HERPUD1-202ENST00000344114 LAMB2P55268 1798 aa17.02■□□□□ 0.32
HERPUD1-202ENST00000344114 KIF6Q6ZMV9 814 aa17.02■□□□□ 0.32
HERPUD1-202ENST00000344114 NIM1KQ8IY84 436 aa17.02■□□□□ 0.32
HERPUD1-202ENST00000344114 ZNF34Q8IZ26 560 aa17.02■□□□□ 0.32
HERPUD1-202ENST00000344114 BEGAINQ9BUH8 593 aa17.02■□□□□ 0.32
HERPUD1-202ENST00000344114 VPS33BQ9H267 617 aa17.02■□□□□ 0.32
HERPUD1-202ENST00000344114 TNNQ9UQP3 1299 aa17.02■□□□□ 0.32
HERPUD1-202ENST00000344114 ANKRD36CQ5JPF3 1778 aa17.02■□□□□ 0.31
HERPUD1-202ENST00000344114 GPTP24298 496 aa17.02■□□□□ 0.31
HERPUD1-202ENST00000344114 MAP2K2P36507 400 aa17.02■□□□□ 0.31
HERPUD1-202ENST00000344114 PAXIP1Q6ZW49 1069 aaPredicted RBP17.02■□□□□ 0.31
HERPUD1-202ENST00000344114 ADARB2Q9NS39 739 aaKnown RBP17.02■□□□□ 0.31
HERPUD1-202ENST00000344114 GPRC5DQ9NZD1 345 aa17.02■□□□□ 0.31
HERPUD1-202ENST00000344114 DDX19BQ9UMR2 479 aa17.02■□□□□ 0.31
HERPUD1-202ENST00000344114 ELL2O00472 640 aaPredicted RBP17.01■□□□□ 0.31
HERPUD1-202ENST00000344114 EIF4A1P60842 406 aaKnown RBP17.01■□□□□ 0.31
HERPUD1-202ENST00000344114 GIGYF2Q6Y7W6 1299 aaKnown RBP17.01■□□□□ 0.31
HERPUD1-202ENST00000344114 C3orf67Q6ZVT6 689 aa17.01■□□□□ 0.31
HERPUD1-202ENST00000344114 ZBTB3Q9H5J0 574 aa17.01■□□□□ 0.31
HERPUD1-202ENST00000344114 PPIP5K2O43314 1243 aa17■□□□□ 0.31
HERPUD1-202ENST00000344114 GRM1Q13255 1194 aa17■□□□□ 0.31
HERPUD1-202ENST00000344114 AOC3Q16853 763 aa17■□□□□ 0.31
HERPUD1-202ENST00000344114 SAPCD2Q86UD0 394 aa17■□□□□ 0.31
HERPUD1-202ENST00000344114 HHIPL1Q96JK4 782 aa17■□□□□ 0.31
HERPUD1-202ENST00000344114 API5Q9BZZ5 524 aaKnown RBP17■□□□□ 0.31
HERPUD1-202ENST00000344114 ABCC4O15439 1325 aa16.99■□□□□ 0.31
HERPUD1-202ENST00000344114 ERBB4Q15303 1308 aa16.99■□□□□ 0.31
HERPUD1-202ENST00000344114 CCDC85CA6NKD9 419 aa16.99■□□□□ 0.31
HERPUD1-202ENST00000344114 AOC2O75106 756 aa16.99■□□□□ 0.31
HERPUD1-202ENST00000344114 MYL6BP14649 208 aa16.99■□□□□ 0.31
HERPUD1-202ENST00000344114 MLLT1Q03111 559 aaPredicted RBP16.99■□□□□ 0.31
HERPUD1-202ENST00000344114 PPP1R42Q7Z4L9 355 aa16.99■□□□□ 0.31
HERPUD1-202ENST00000344114 RTFDC1Q9BY42 306 aaPredicted RBP16.99■□□□□ 0.31
HERPUD1-202ENST00000344114 CHMP4BQ9H444 224 aaKnown RBP16.99■□□□□ 0.31
HERPUD1-202ENST00000344114 TSHZ2Q9NRE2 1034 aa16.99■□□□□ 0.31
HERPUD1-202ENST00000344114 PGAP2Q9UHJ9 254 aa16.99■□□□□ 0.31
HERPUD1-202ENST00000344114 ATP6V0A2Q9Y487 856 aa16.99■□□□□ 0.31
HERPUD1-202ENST00000344114 CDHR2Q9BYE9 1310 aa16.98■□□□□ 0.31
HERPUD1-202ENST00000344114 TCERG1O14776 1098 aaKnown RBP16.98■□□□□ 0.31
HERPUD1-202ENST00000344114 CXCL9Q07325 125 aa16.98■□□□□ 0.31
HERPUD1-202ENST00000344114 KRT24Q2M2I5 525 aa16.98■□□□□ 0.31
HERPUD1-202ENST00000344114 PARP10Q53GL7 1025 aa16.98■□□□□ 0.31
HERPUD1-202ENST00000344114 ZNRF3Q9ULT6 936 aa16.98■□□□□ 0.31
HERPUD1-202ENST00000344114 CASP8AP2Q9UKL3 1982 aa16.98■□□□□ 0.31
HERPUD1-202ENST00000344114 PTPRCP08575 1304 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms