RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 NLRP10Q86W26 655 aa22.5■■□□□ 1.19
HOXA9-201ENST00000343483 UPF1Q92900 1129 aaKnown RBP eCLIP22.5■■□□□ 1.19
HOXA9-201ENST00000343483 TNPO1Q92973 898 aaKnown RBP22.5■■□□□ 1.19
HOXA9-201ENST00000343483 DBNDD2Q9BQY9 259 aa22.5■■□□□ 1.19
HOXA9-201ENST00000343483 FSD1Q9BTV5 496 aa22.5■■□□□ 1.19
HOXA9-201ENST00000343483 LOC102724428A0A0B4J2F2 783 aa22.49■■□□□ 1.19
HOXA9-201ENST00000343483 IL15P40933 162 aaPredicted RBP22.49■■□□□ 1.19
HOXA9-201ENST00000343483 SIK1P57059 783 aa22.49■■□□□ 1.19
HOXA9-201ENST00000343483 LRRC24Q50LG9 513 aa22.49■■□□□ 1.19
HOXA9-201ENST00000343483 CCDC85AQ96PX6 553 aaPredicted RBP22.49■■□□□ 1.19
HOXA9-201ENST00000343483 EYA2O00167 538 aa22.48■■□□□ 1.19
HOXA9-201ENST00000343483 ATP5JP18859 108 aa22.48■■□□□ 1.19
HOXA9-201ENST00000343483 HIP1O00291 1037 aa22.48■■□□□ 1.19
HOXA9-201ENST00000343483 SYNE4Q8N205 404 aa22.48■■□□□ 1.19
HOXA9-201ENST00000343483 NEUROD6Q96NK8 337 aa22.47■■□□□ 1.19
HOXA9-201ENST00000343483 CCDC87Q9NVE4 849 aa22.47■■□□□ 1.19
HOXA9-201ENST00000343483 PALLDQ8WX93 1383 aa22.47■■□□□ 1.19
HOXA9-201ENST00000343483 KCNQ2O43526 872 aa22.46■■□□□ 1.19
HOXA9-201ENST00000343483 TRAK2O60296 914 aa22.46■■□□□ 1.19
HOXA9-201ENST00000343483 CRKLP46109 303 aaKnown RBP22.46■■□□□ 1.19
HOXA9-201ENST00000343483 EDC3Q96F86 508 aaKnown RBP22.46■■□□□ 1.19
HOXA9-201ENST00000343483 FAM227BQ96M60 508 aa22.46■■□□□ 1.19
HOXA9-201ENST00000343483 ERVV-1B6SEH8 477 aa22.46■■□□□ 1.19
HOXA9-201ENST00000343483 NMIQ13287 307 aaPredicted RBP22.46■■□□□ 1.19
HOXA9-201ENST00000343483 INTS5Q6P9B9 1019 aaKnown RBP22.46■■□□□ 1.19
HOXA9-201ENST00000343483 GBP4Q96PP9 640 aa22.46■■□□□ 1.19
HOXA9-201ENST00000343483 PLA2G12BQ9BX93 195 aa22.46■■□□□ 1.19
HOXA9-201ENST00000343483 PUS3Q9BZE2 481 aaKnown RBP22.46■■□□□ 1.19
HOXA9-201ENST00000343483 CIAO1O76071 339 aa22.45■■□□□ 1.18
HOXA9-201ENST00000343483 UPF3BQ9BZI7 483 aaKnown RBP22.45■■□□□ 1.18
HOXA9-201ENST00000343483 ITPK1Q13572 414 aa22.45■■□□□ 1.18
HOXA9-201ENST00000343483 TAF7LQ5H9L4 462 aa22.45■■□□□ 1.18
HOXA9-201ENST00000343483 IL17RAQ96F46 866 aa22.45■■□□□ 1.18
HOXA9-201ENST00000343483 DNAJC2Q99543 621 aaKnown RBP22.45■■□□□ 1.18
HOXA9-201ENST00000343483 TRMT112Q9UI30 125 aaKnown RBP22.45■■□□□ 1.18
HOXA9-201ENST00000343483 NDUFB9Q9Y6M9 179 aa22.45■■□□□ 1.18
HOXA9-201ENST00000343483 EIF5P55010 431 aaKnown RBP22.44■■□□□ 1.18
HOXA9-201ENST00000343483 TIMM10P62072 90 aa22.44■■□□□ 1.18
HOXA9-201ENST00000343483 PTF1AQ7RTS3 328 aa22.44■■□□□ 1.18
HOXA9-201ENST00000343483 CDHR2Q9BYE9 1310 aa22.44■■□□□ 1.18
HOXA9-201ENST00000343483 PTH1RQ03431 593 aa22.43■■□□□ 1.18
HOXA9-201ENST00000343483 IFIT5Q13325 482 aaKnown RBP22.43■■□□□ 1.18
HOXA9-201ENST00000343483 GPR108Q9NPR9 543 aa22.43■■□□□ 1.18
HOXA9-201ENST00000343483 BRPF3Q9ULD4 1205 aa22.43■■□□□ 1.18
HOXA9-201ENST00000343483 CSF1RP07333 972 aa22.43■■□□□ 1.18
HOXA9-201ENST00000343483 SNX14Q9Y5W7 946 aa22.43■■□□□ 1.18
HOXA9-201ENST00000343483 A0A0D9SFI3 127 aa22.42■■□□□ 1.18
HOXA9-201ENST00000343483 MCM2P49736 904 aa22.42■■□□□ 1.18
HOXA9-201ENST00000343483 SMARCC1Q92922 1105 aaPredicted RBP22.42■■□□□ 1.18
HOXA9-201ENST00000343483 IRS4O14654 1257 aaPredicted RBP22.42■■□□□ 1.18
HOXA9-201ENST00000343483 TRIM37O94972 964 aa22.42■■□□□ 1.18
HOXA9-201ENST00000343483 NOL8Q76FK4 1167 aaKnown RBP22.42■■□□□ 1.18
HOXA9-201ENST00000343483 HAUS7Q99871 368 aa22.42■■□□□ 1.18
HOXA9-201ENST00000343483 GZF1Q9H116 711 aaPredicted RBP22.42■■□□□ 1.18
HOXA9-201ENST00000343483 CEP126Q9P2H0 1117 aa22.42■■□□□ 1.18
HOXA9-201ENST00000343483 UBN2Q6ZU65 1347 aa22.42■■□□□ 1.18
HOXA9-201ENST00000343483 RASEFQ8IZ41 740 aa22.41■■□□□ 1.18
HOXA9-201ENST00000343483 IL27Q8NEV9 243 aa22.41■■□□□ 1.18
HOXA9-201ENST00000343483 CCDC171Q6TFL3 1326 aa22.41■■□□□ 1.18
HOXA9-201ENST00000343483 ZNF609O15014 1411 aa22.41■■□□□ 1.18
HOXA9-201ENST00000343483 A0A1B0GUL7 405 aa22.4■■□□□ 1.18
HOXA9-201ENST00000343483 CTSWP56202 376 aa22.4■■□□□ 1.18
HOXA9-201ENST00000343483 SSFA2P28290 1259 aa22.4■■□□□ 1.18
HOXA9-201ENST00000343483 ZNF34Q8IZ26 560 aa22.4■■□□□ 1.18
HOXA9-201ENST00000343483 TTLL11Q8NHH1 800 aa22.4■■□□□ 1.18
HOXA9-201ENST00000343483 TMX3Q96JJ7 454 aa22.4■■□□□ 1.18
HOXA9-201ENST00000343483 GREM2Q9H772 168 aa22.4■■□□□ 1.18
HOXA9-201ENST00000343483 PRPF40BQ6NWY9 871 aaKnown RBP22.39■■□□□ 1.17
HOXA9-201ENST00000343483 DDX46Q7L014 1031 aaKnown RBP22.39■■□□□ 1.17
HOXA9-201ENST00000343483 FBXO3Q9UK99 471 aa22.39■■□□□ 1.17
HOXA9-201ENST00000343483 ITGA6P23229 1130 aa22.38■■□□□ 1.17
HOXA9-201ENST00000343483 KCNJ4P48050 445 aa22.38■■□□□ 1.17
HOXA9-201ENST00000343483 L1TD1Q5T7N2 865 aaKnown RBP22.38■■□□□ 1.17
HOXA9-201ENST00000343483 ZGPATQ8N5A5 531 aaKnown RBP22.38■■□□□ 1.17
HOXA9-201ENST00000343483 ANKRD36CQ5JPF3 1778 aa22.38■■□□□ 1.17
HOXA9-201ENST00000343483 FAM196AQ6ZSG2 479 aa22.38■■□□□ 1.17
HOXA9-201ENST00000343483 DEFB132Q7Z7B7 95 aa22.37■■□□□ 1.17
HOXA9-201ENST00000343483 SNRKQ9NRH2 765 aa22.37■■□□□ 1.17
HOXA9-201ENST00000343483 FAM177BA6PVY3 158 aa22.37■■□□□ 1.17
HOXA9-201ENST00000343483 PTMSP20962 102 aa22.37■■□□□ 1.17
HOXA9-201ENST00000343483 CWC22Q9HCG8 908 aaKnown RBP22.37■■□□□ 1.17
HOXA9-201ENST00000343483 AKAP2Q9Y2D5 859 aa22.37■■□□□ 1.17
HOXA9-201ENST00000343483 RBM8AQ9Y5S9 174 aaKnown RBP22.37■■□□□ 1.17
HOXA9-201ENST00000343483 MED23Q9ULK4 1368 aa22.36■■□□□ 1.17
HOXA9-201ENST00000343483 NUP98P52948 1817 aa22.36■■□□□ 1.17
HOXA9-201ENST00000343483 ANKRD18BA2A2Z9 1011 aa22.36■■□□□ 1.17
HOXA9-201ENST00000343483 PDE8AO60658 829 aa22.36■■□□□ 1.17
HOXA9-201ENST00000343483 ZNF589Q86UQ0 364 aaPredicted RBP22.36■■□□□ 1.17
HOXA9-201ENST00000343483 SBF2Q86WG5 1849 aa22.36■■□□□ 1.17
HOXA9-201ENST00000343483 GOLIM4O00461 696 aa22.35■■□□□ 1.17
HOXA9-201ENST00000343483 CAMTA2O94983 1202 aa22.35■■□□□ 1.17
HOXA9-201ENST00000343483 LDHAL6AQ6ZMR3 332 aa22.35■■□□□ 1.17
HOXA9-201ENST00000343483 MAP4K1Q92918 833 aa22.35■■□□□ 1.17
HOXA9-201ENST00000343483 PAG1Q9NWQ8 432 aa22.35■■□□□ 1.17
HOXA9-201ENST00000343483 NUCB2P80303 420 aa22.35■■□□□ 1.17
HOXA9-201ENST00000343483 GORABQ5T7V8 394 aa22.35■■□□□ 1.17
HOXA9-201ENST00000343483 SUSD4Q5VX71 490 aa22.35■■□□□ 1.17
HOXA9-201ENST00000343483 RFX7Q2KHR2 1363 aa22.35■■□□□ 1.17
HOXA9-201ENST00000343483 GOLGA6L3A6NEY3 463 aa22.34■■□□□ 1.17
HOXA9-201ENST00000343483 ZKSCAN1P17029 563 aaPredicted RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms