RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 UBE3BQ7Z3V4 1068 aa16.57■□□□□ 0.24
HLA-DQA1-201ENST00000343139 PSMD1Q99460 953 aa16.57■□□□□ 0.24
HLA-DQA1-201ENST00000343139 API5Q9BZZ5 524 aaKnown RBP16.57■□□□□ 0.24
HLA-DQA1-201ENST00000343139 TAOK3Q9H2K8 898 aa16.57■□□□□ 0.24
HLA-DQA1-201ENST00000343139 SLX4Q8IY92 1834 aa16.57■□□□□ 0.24
HLA-DQA1-201ENST00000343139 DDX60Q8IY21 1712 aaKnown RBP16.57■□□□□ 0.24
HLA-DQA1-201ENST00000343139 LAMB2P55268 1798 aa16.57■□□□□ 0.24
HLA-DQA1-201ENST00000343139 GRM8O00222 908 aa16.56■□□□□ 0.24
HLA-DQA1-201ENST00000343139 CTSWP56202 376 aa16.56■□□□□ 0.24
HLA-DQA1-201ENST00000343139 SLC4A10Q6U841 1118 aa16.56■□□□□ 0.24
HLA-DQA1-201ENST00000343139 SP8Q8IXZ3 490 aa16.56■□□□□ 0.24
HLA-DQA1-201ENST00000343139 TMX4Q9H1E5 349 aaPredicted RBP16.56■□□□□ 0.24
HLA-DQA1-201ENST00000343139 UTYO14607 1347 aa16.56■□□□□ 0.24
HLA-DQA1-201ENST00000343139 IPO8O15397 1037 aaKnown RBP16.55■□□□□ 0.24
HLA-DQA1-201ENST00000343139 FKBP4Q02790 459 aaKnown RBP eCLIP16.55■□□□□ 0.24
HLA-DQA1-201ENST00000343139 C9orf131Q5VYM1 1079 aa16.55■□□□□ 0.24
HLA-DQA1-201ENST00000343139 TTLL11Q8NHH1 800 aa16.55■□□□□ 0.24
HLA-DQA1-201ENST00000343139 ZNF219Q9P2Y4 722 aaPredicted RBP16.55■□□□□ 0.24
HLA-DQA1-201ENST00000343139 NOB1Q9ULX3 412 aaKnown RBP16.55■□□□□ 0.24
HLA-DQA1-201ENST00000343139 CSF1RP07333 972 aa16.55■□□□□ 0.24
HLA-DQA1-201ENST00000343139 CCT4P50991 539 aaKnown RBP16.54■□□□□ 0.24
HLA-DQA1-201ENST00000343139 RPS8P62241 208 aaKnown RBP16.54■□□□□ 0.24
HLA-DQA1-201ENST00000343139 RASSF7Q02833 373 aa16.54■□□□□ 0.24
HLA-DQA1-201ENST00000343139 VPS33BQ9H267 617 aa16.54■□□□□ 0.24
HLA-DQA1-201ENST00000343139 C9orf78Q9NZ63 289 aaPredicted RBP16.54■□□□□ 0.24
HLA-DQA1-201ENST00000343139 RNF181Q9P0P0 153 aa16.54■□□□□ 0.24
HLA-DQA1-201ENST00000343139 PRELPP51888 382 aa16.53■□□□□ 0.24
HLA-DQA1-201ENST00000343139 ZNF784Q8NCA9 323 aaPredicted RBP16.53■□□□□ 0.24
HLA-DQA1-201ENST00000343139 JARID2Q92833 1246 aaPredicted RBP16.53■□□□□ 0.24
HLA-DQA1-201ENST00000343139 CELF1Q92879 486 aaKnown RBP16.53■□□□□ 0.24
HLA-DQA1-201ENST00000343139 FER1L6Q2WGJ9 1857 aa16.53■□□□□ 0.24
HLA-DQA1-201ENST00000343139 CDC5LQ99459 802 aaKnown RBP16.52■□□□□ 0.24
HLA-DQA1-201ENST00000343139 RTFDC1Q9BY42 306 aaPredicted RBP16.52■□□□□ 0.24
HLA-DQA1-201ENST00000343139 OLFM4Q6UX06 510 aa16.51■□□□□ 0.23
HLA-DQA1-201ENST00000343139 BCAR3O75815 825 aa16.51■□□□□ 0.23
HLA-DQA1-201ENST00000343139 FOXO4P98177 505 aa16.51■□□□□ 0.23
HLA-DQA1-201ENST00000343139 SUPT20HQ8NEM7 779 aa16.51■□□□□ 0.23
HLA-DQA1-201ENST00000343139 SEC31BQ9NQW1 1179 aa16.51■□□□□ 0.23
HLA-DQA1-201ENST00000343139 ATF7IPQ6VMQ6 1270 aa16.5■□□□□ 0.23
HLA-DQA1-201ENST00000343139 ANKRD18AQ8IVF6 992 aa16.5■□□□□ 0.23
HLA-DQA1-201ENST00000343139 USP44Q9H0E7 712 aa16.5■□□□□ 0.23
HLA-DQA1-201ENST00000343139 GREM2Q9H772 168 aa16.5■□□□□ 0.23
HLA-DQA1-201ENST00000343139 NBPF7P0C2Y1 421 aaPredicted RBP16.49■□□□□ 0.23
HLA-DQA1-201ENST00000343139 INTS3Q68E01 1043 aaKnown RBP16.49■□□□□ 0.23
HLA-DQA1-201ENST00000343139 MPNDQ8N594 471 aa16.49■□□□□ 0.23
HLA-DQA1-201ENST00000343139 BSDC1Q9NW68 430 aaPredicted RBP16.49■□□□□ 0.23
HLA-DQA1-201ENST00000343139 PODXL2Q9NZ53 605 aa16.49■□□□□ 0.23
HLA-DQA1-201ENST00000343139 TRIM27P14373 513 aa16.48■□□□□ 0.23
HLA-DQA1-201ENST00000343139 IARSP41252 1262 aaKnown RBP16.48■□□□□ 0.23
HLA-DQA1-201ENST00000343139 DPP8Q6V1X1 898 aaPredicted RBP16.48■□□□□ 0.23
HLA-DQA1-201ENST00000343139 HDAC5Q9UQL6 1122 aa16.48■□□□□ 0.23
HLA-DQA1-201ENST00000343139 ITGA6P23229 1130 aa16.47■□□□□ 0.23
HLA-DQA1-201ENST00000343139 RABL6Q3YEC7 729 aaPredicted RBP16.47■□□□□ 0.23
HLA-DQA1-201ENST00000343139 ZKSCAN2Q63HK3 967 aa16.47■□□□□ 0.23
HLA-DQA1-201ENST00000343139 ZNF277Q9NRM2 450 aaPredicted RBP16.47■□□□□ 0.23
HLA-DQA1-201ENST00000343139 LRRC37AA6NMS7 1700 aa16.47■□□□□ 0.23
HLA-DQA1-201ENST00000343139 IFIT5Q13325 482 aaKnown RBP16.47■□□□□ 0.23
HLA-DQA1-201ENST00000343139 KAZALD1Q96I82 304 aa16.47■□□□□ 0.23
HLA-DQA1-201ENST00000343139 CCDC85AQ96PX6 553 aaPredicted RBP16.47■□□□□ 0.23
HLA-DQA1-201ENST00000343139 SBF1O95248 1867 aa16.46■□□□□ 0.23
HLA-DQA1-201ENST00000343139 CACNA1SQ13698 1873 aa16.46■□□□□ 0.23
HLA-DQA1-201ENST00000343139 ANKRD18BA2A2Z9 1011 aa16.46■□□□□ 0.23
HLA-DQA1-201ENST00000343139 IGHMBP2P38935 993 aaKnown RBP16.46■□□□□ 0.23
HLA-DQA1-201ENST00000343139 FAM161AQ3B820 660 aa16.46■□□□□ 0.23
HLA-DQA1-201ENST00000343139 EPHA10Q5JZY3 1008 aa16.46■□□□□ 0.23
HLA-DQA1-201ENST00000343139 LMBR1LQ6UX01 489 aa16.46■□□□□ 0.23
HLA-DQA1-201ENST00000343139 FRAT1Q92837 279 aaPredicted RBP16.46■□□□□ 0.23
HLA-DQA1-201ENST00000343139 SUCLG2Q96I99 432 aa16.46■□□□□ 0.23
HLA-DQA1-201ENST00000343139 KDM2BQ8NHM5 1336 aa16.45■□□□□ 0.22
HLA-DQA1-201ENST00000343139 GLTPD2A6NH11 291 aa16.45■□□□□ 0.22
HLA-DQA1-201ENST00000343139 FZD9O00144 591 aa16.45■□□□□ 0.22
HLA-DQA1-201ENST00000343139 KIAA2012Q0VF49 1180 aa16.45■□□□□ 0.22
HLA-DQA1-201ENST00000343139 DPY19L2Q6NUT2 758 aa16.45■□□□□ 0.22
HLA-DQA1-201ENST00000343139 JDP2Q8WYK2 163 aa16.45■□□□□ 0.22
HLA-DQA1-201ENST00000343139 GPBP1L1Q9HC44 474 aaPredicted RBP16.45■□□□□ 0.22
HLA-DQA1-201ENST00000343139 CCDC57Q2TAC2 916 aa16.44■□□□□ 0.22
HLA-DQA1-201ENST00000343139 SLC51AQ86UW1 340 aa16.44■□□□□ 0.22
HLA-DQA1-201ENST00000343139 NSFL1CQ9UNZ2 370 aaKnown RBP16.44■□□□□ 0.22
HLA-DQA1-201ENST00000343139 COL4A1P02462 1669 aa16.44■□□□□ 0.22
HLA-DQA1-201ENST00000343139 XDHP47989 1333 aa16.44■□□□□ 0.22
HLA-DQA1-201ENST00000343139 MYH3P11055 1940 aa16.43■□□□□ 0.22
HLA-DQA1-201ENST00000343139 GPSM2P81274 684 aa16.43■□□□□ 0.22
HLA-DQA1-201ENST00000343139 EYA3Q99504 573 aa16.43■□□□□ 0.22
HLA-DQA1-201ENST00000343139 MPHOSPH8Q99549 860 aa16.43■□□□□ 0.22
HLA-DQA1-201ENST00000343139 BICC1Q9H694 974 aaKnown RBP16.43■□□□□ 0.22
HLA-DQA1-201ENST00000343139 MINPP1Q9UNW1 487 aa16.43■□□□□ 0.22
HLA-DQA1-201ENST00000343139 PPIP5K2O43314 1243 aa16.43■□□□□ 0.22
HLA-DQA1-201ENST00000343139 GNAI3P08754 354 aa16.43■□□□□ 0.22
HLA-DQA1-201ENST00000343139 UBTFL1P0CB47 393 aaPredicted RBP16.43■□□□□ 0.22
HLA-DQA1-201ENST00000343139 LARGE2Q8N3Y3 721 aa16.43■□□□□ 0.22
HLA-DQA1-201ENST00000343139 ANKRD44Q8N8A2 993 aa16.43■□□□□ 0.22
HLA-DQA1-201ENST00000343139 TBC1D16Q8TBP0 767 aa16.43■□□□□ 0.22
HLA-DQA1-201ENST00000343139 DUOX1Q9NRD9 1551 aa16.42■□□□□ 0.22
HLA-DQA1-201ENST00000343139 MS4A1P11836 297 aa16.42■□□□□ 0.22
HLA-DQA1-201ENST00000343139 ANKRD2Q9GZV1 360 aa16.42■□□□□ 0.22
HLA-DQA1-201ENST00000343139 ANKIB1Q9P2G1 1089 aa16.42■□□□□ 0.22
HLA-DQA1-201ENST00000343139 POLLQ9UGP5 575 aa16.42■□□□□ 0.22
HLA-DQA1-201ENST00000343139 GGA1Q9UJY5 639 aa16.42■□□□□ 0.22
HLA-DQA1-201ENST00000343139 RCAN3Q9UKA8 241 aa16.42■□□□□ 0.22
HLA-DQA1-201ENST00000343139 ATP2B4P23634 1241 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms