RNA–Protein interactions for RNA: ENST00000343131.6

SYCE1-202, Transcript of synaptonemal complex central element protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYCE1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1-202ENST00000343131 DPP8Q6V1X1 898 aaPredicted RBP20.56■□□□□ 0.88
SYCE1-202ENST00000343131 GRAPLQ8TC17 118 aaPredicted RBP20.56■□□□□ 0.88
SYCE1-202ENST00000343131 MYH3P11055 1940 aa20.56■□□□□ 0.88
SYCE1-202ENST00000343131 CNTNAP1P78357 1384 aa20.56■□□□□ 0.88
SYCE1-202ENST00000343131 LMOD1P29536 600 aaPredicted RBP20.55■□□□□ 0.88
SYCE1-202ENST00000343131 COL13A1Q5TAT6 717 aaPredicted RBP20.55■□□□□ 0.88
SYCE1-202ENST00000343131 PNMA8AQ86V59 439 aaPredicted RBP20.55■□□□□ 0.88
SYCE1-202ENST00000343131 PHAXQ9H814 394 aaKnown RBP20.55■□□□□ 0.88
SYCE1-202ENST00000343131 EPS15P42566 896 aa20.54■□□□□ 0.88
SYCE1-202ENST00000343131 CALD1Q05682 793 aaKnown RBP20.54■□□□□ 0.88
SYCE1-202ENST00000343131 SP8Q8IXZ3 490 aa20.54■□□□□ 0.88
SYCE1-202ENST00000343131 C8orf58Q8NAV2 365 aa20.54■□□□□ 0.88
SYCE1-202ENST00000343131 RTFDC1Q9BY42 306 aaPredicted RBP20.54■□□□□ 0.88
SYCE1-202ENST00000343131 BBOX1O75936 387 aa20.53■□□□□ 0.88
SYCE1-202ENST00000343131 GOLGA2Q08379 1002 aa20.53■□□□□ 0.88
SYCE1-202ENST00000343131 MPNDQ8N594 471 aa20.53■□□□□ 0.88
SYCE1-202ENST00000343131 RIC3Q7Z5B4 369 aa20.52■□□□□ 0.88
SYCE1-202ENST00000343131 CNTROBQ8N137 903 aa20.52■□□□□ 0.88
SYCE1-202ENST00000343131 SUPT20HQ8NEM7 779 aa20.52■□□□□ 0.88
SYCE1-202ENST00000343131 CELF1Q92879 486 aaKnown RBP20.52■□□□□ 0.88
SYCE1-202ENST00000343131 TSR2Q969E8 191 aaKnown RBP20.52■□□□□ 0.88
SYCE1-202ENST00000343131 THSD7BQ9C0I4 1608 aa20.52■□□□□ 0.88
SYCE1-202ENST00000343131 SCN9AQ15858 1988 aa20.52■□□□□ 0.87
SYCE1-202ENST00000343131 TMEM88BA6NKF7 163 aa20.51■□□□□ 0.87
SYCE1-202ENST00000343131 CXCL9Q07325 125 aa20.51■□□□□ 0.87
SYCE1-202ENST00000343131 KIAA2012Q0VF49 1180 aa20.51■□□□□ 0.87
SYCE1-202ENST00000343131 ZNRF3Q9ULT6 936 aa20.51■□□□□ 0.87
SYCE1-202ENST00000343131 IRS4O14654 1257 aaPredicted RBP20.5■□□□□ 0.87
SYCE1-202ENST00000343131 FMR1Q06787 632 aaKnown RBP eCLIP20.5■□□□□ 0.87
SYCE1-202ENST00000343131 TSPYL6Q8N831 410 aa20.5■□□□□ 0.87
SYCE1-202ENST00000343131 MYD88Q99836 296 aa20.5■□□□□ 0.87
SYCE1-202ENST00000343131 PSME4Q14997 1843 aa20.49■□□□□ 0.87
SYCE1-202ENST00000343131 RAD17O75943 681 aa20.49■□□□□ 0.87
SYCE1-202ENST00000343131 GMPSP49915 693 aaPredicted RBP20.49■□□□□ 0.87
SYCE1-202ENST00000343131 GPRC5DQ9NZD1 345 aa20.49■□□□□ 0.87
SYCE1-202ENST00000343131 YDJCA8MPS7 323 aa20.48■□□□□ 0.87
SYCE1-202ENST00000343131 SF3B3Q15393 1217 aaKnown RBP20.48■□□□□ 0.87
SYCE1-202ENST00000343131 VPS33BQ9H267 617 aa20.48■□□□□ 0.87
SYCE1-202ENST00000343131 TRIM28Q13263 835 aaKnown RBP20.47■□□□□ 0.87
SYCE1-202ENST00000343131 CIAPIN1Q6FI81 312 aa20.47■□□□□ 0.87
SYCE1-202ENST00000343131 TMC4Q7Z404 712 aa20.47■□□□□ 0.87
SYCE1-202ENST00000343131 JARID2Q92833 1246 aaPredicted RBP20.47■□□□□ 0.87
SYCE1-202ENST00000343131 GPR101Q96P66 508 aaPredicted RBP20.47■□□□□ 0.87
SYCE1-202ENST00000343131 TRAF5O00463 557 aa20.46■□□□□ 0.87
SYCE1-202ENST00000343131 VEGFBP49765 207 aa20.46■□□□□ 0.87
SYCE1-202ENST00000343131 GPSM2P81274 684 aa20.46■□□□□ 0.87
SYCE1-202ENST00000343131 USP50Q70EL3 339 aaPredicted RBP20.46■□□□□ 0.87
SYCE1-202ENST00000343131 ZBTB38Q8NAP3 1195 aaPredicted RBP20.46■□□□□ 0.87
SYCE1-202ENST00000343131 SHTN1A0MZ66 631 aa20.45■□□□□ 0.86
SYCE1-202ENST00000343131 CCDC30Q5VVM6 783 aa20.45■□□□□ 0.86
SYCE1-202ENST00000343131 SEC31BQ9NQW1 1179 aa20.45■□□□□ 0.86
SYCE1-202ENST00000343131 ADARB2Q9NS39 739 aaKnown RBP20.45■□□□□ 0.86
SYCE1-202ENST00000343131 ABT1Q9ULW3 272 aaKnown RBP20.45■□□□□ 0.86
SYCE1-202ENST00000343131 NSFL1CQ9UNZ2 370 aaKnown RBP20.45■□□□□ 0.86
SYCE1-202ENST00000343131 CCDC85AQ96PX6 553 aaPredicted RBP20.44■□□□□ 0.86
SYCE1-202ENST00000343131 DBNDD1Q9H9R9 158 aa20.44■□□□□ 0.86
SYCE1-202ENST00000343131 CWC25Q9NXE8 425 aaPredicted RBP20.44■□□□□ 0.86
SYCE1-202ENST00000343131 CACNA1FO60840 1977 aa20.44■□□□□ 0.86
SYCE1-202ENST00000343131 CDHR2Q9BYE9 1310 aa20.44■□□□□ 0.86
SYCE1-202ENST00000343131 RASSF10A6NK89 507 aa20.43■□□□□ 0.86
SYCE1-202ENST00000343131 C6orf229H3BNL8 230 aa20.43■□□□□ 0.86
SYCE1-202ENST00000343131 RIMBP2O15034 1052 aa20.43■□□□□ 0.86
SYCE1-202ENST00000343131 WWC1Q8IX03 1113 aa20.43■□□□□ 0.86
SYCE1-202ENST00000343131 TNS4Q8IZW8 715 aa20.43■□□□□ 0.86
SYCE1-202ENST00000343131 CCDC191Q8NCU4 936 aa20.43■□□□□ 0.86
SYCE1-202ENST00000343131 TRPM4Q8TD43 1214 aa20.43■□□□□ 0.86
SYCE1-202ENST00000343131 METTL22Q9BUU2 404 aaPredicted RBP20.43■□□□□ 0.86
SYCE1-202ENST00000343131 BCL2L13Q9BXK5 485 aa20.43■□□□□ 0.86
SYCE1-202ENST00000343131 MRS2Q9HD23 443 aa20.43■□□□□ 0.86
SYCE1-202ENST00000343131 POLLQ9UGP5 575 aa20.43■□□□□ 0.86
SYCE1-202ENST00000343131 MAP3K2Q9Y2U5 619 aa20.43■□□□□ 0.86
SYCE1-202ENST00000343131 ZNF646O15015 1829 aaPredicted RBP20.43■□□□□ 0.86
SYCE1-202ENST00000343131 FOXN1O15353 648 aa20.42■□□□□ 0.86
SYCE1-202ENST00000343131 DDX58O95786 925 aaKnown RBP20.42■□□□□ 0.86
SYCE1-202ENST00000343131 PCCAP05165 728 aaPredicted RBP20.42■□□□□ 0.86
SYCE1-202ENST00000343131 WASHC4Q2M389 1173 aa20.42■□□□□ 0.86
SYCE1-202ENST00000343131 CAPN15O75808 1086 aa20.41■□□□□ 0.86
SYCE1-202ENST00000343131 TNIP1Q15025 636 aa20.41■□□□□ 0.86
SYCE1-202ENST00000343131 CCDC27Q2M243 656 aa20.41■□□□□ 0.86
SYCE1-202ENST00000343131 ZBTB12Q9Y330 459 aaPredicted RBP20.41■□□□□ 0.86
SYCE1-202ENST00000343131 RTL9Q8NET4 1388 aa20.41■□□□□ 0.86
SYCE1-202ENST00000343131 A0A1B0GUL6 1792 aa20.41■□□□□ 0.86
SYCE1-202ENST00000343131 POLR2AP24928 1970 aaKnown RBP20.41■□□□□ 0.86
SYCE1-202ENST00000343131 PI4KAP2A4QPH2 592 aa20.4■□□□□ 0.86
SYCE1-202ENST00000343131 PSMD14O00487 310 aa20.4■□□□□ 0.86
SYCE1-202ENST00000343131 ECE2O60344 883 aa20.4■□□□□ 0.86
SYCE1-202ENST00000343131 RPS8P62241 208 aaKnown RBP20.4■□□□□ 0.86
SYCE1-202ENST00000343131 DOK7Q18PE1 504 aa20.4■□□□□ 0.86
SYCE1-202ENST00000343131 TWISTNBQ3B726 338 aaPredicted RBP20.4■□□□□ 0.86
SYCE1-202ENST00000343131 G2E3Q7L622 706 aa20.4■□□□□ 0.86
SYCE1-202ENST00000343131 PI4KAP1Q8N8J0 262 aa20.4■□□□□ 0.86
SYCE1-202ENST00000343131 TBC1D16Q8TBP0 767 aa20.4■□□□□ 0.86
SYCE1-202ENST00000343131 GLIS2Q9BZE0 524 aaPredicted RBP20.4■□□□□ 0.86
SYCE1-202ENST00000343131 FANCIQ9NVI1 1328 aa20.39■□□□□ 0.85
SYCE1-202ENST00000343131 PDE8AO60658 829 aa20.39■□□□□ 0.85
SYCE1-202ENST00000343131 UFL1O94874 794 aa20.39■□□□□ 0.85
SYCE1-202ENST00000343131 IGKV5-2P06315 115 aa20.39■□□□□ 0.85
SYCE1-202ENST00000343131 HIRAP54198 1017 aaPredicted RBP20.39■□□□□ 0.85
SYCE1-202ENST00000343131 DEFB115Q30KQ5 88 aa20.39■□□□□ 0.85
SYCE1-202ENST00000343131 CCDC152Q4G0S7 254 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms