RNA–Protein interactions for RNA: ENST00000342192.8

UBE2L3-201, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2L3, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-201ENST00000342192 NECAB1Q8N987 351 aa14.7□□□□□ -0.06
UBE2L3-201ENST00000342192 ALDH8A1Q9H2A2 487 aaPredicted RBP14.69□□□□□ -0.06
UBE2L3-201ENST00000342192 LAMB4A4D0S4 1761 aa14.69□□□□□ -0.06
UBE2L3-201ENST00000342192 SNRPA1P09661 255 aaKnown RBP14.69□□□□□ -0.06
UBE2L3-201ENST00000342192 GLI3P10071 1580 aa14.69□□□□□ -0.06
UBE2L3-201ENST00000342192 RFX5P48382 616 aaPredicted RBP14.69□□□□□ -0.06
UBE2L3-201ENST00000342192 ANKRD1Q15327 319 aa14.69□□□□□ -0.06
UBE2L3-201ENST00000342192 BLOC1S2Q6QNY1 142 aa14.69□□□□□ -0.06
UBE2L3-201ENST00000342192 ANKRD13DQ6ZTN6 518 aa14.69□□□□□ -0.06
UBE2L3-201ENST00000342192 HMG20BQ9P0W2 317 aa14.69□□□□□ -0.06
UBE2L3-201ENST00000342192 R3HCC1Q9Y3T6 440 aaKnown RBP14.69□□□□□ -0.06
UBE2L3-201ENST00000342192 RFX7Q2KHR2 1363 aa14.69□□□□□ -0.06
UBE2L3-201ENST00000342192 VPS37CA5D8V6 355 aaPredicted RBP14.68□□□□□ -0.06
UBE2L3-201ENST00000342192 TERF1P54274 439 aa14.68□□□□□ -0.06
UBE2L3-201ENST00000342192 ZNF589Q86UQ0 364 aaPredicted RBP14.68□□□□□ -0.06
UBE2L3-201ENST00000342192 RPS6KB1P23443 525 aa14.68□□□□□ -0.06
UBE2L3-201ENST00000342192 COL9A3Q14050 684 aaPredicted RBP14.68□□□□□ -0.06
UBE2L3-201ENST00000342192 TTC5Q8N0Z6 440 aa14.68□□□□□ -0.06
UBE2L3-201ENST00000342192 DTNBO60941 627 aa14.68□□□□□ -0.06
UBE2L3-201ENST00000342192 ATP5JP18859 108 aa14.68□□□□□ -0.06
UBE2L3-201ENST00000342192 TSGA10IPQ3SY00 556 aa14.68□□□□□ -0.06
UBE2L3-201ENST00000342192 RABL6Q3YEC7 729 aaPredicted RBP14.68□□□□□ -0.06
UBE2L3-201ENST00000342192 DCAF5Q96JK2 942 aa14.68□□□□□ -0.06
UBE2L3-201ENST00000342192 DBNLQ9UJU6 430 aaKnown RBP14.68□□□□□ -0.06
UBE2L3-201ENST00000342192 USP16Q9Y5T5 823 aa14.68□□□□□ -0.06
UBE2L3-201ENST00000342192 PARP4Q9UKK3 1724 aaKnown RBP14.67□□□□□ -0.06
UBE2L3-201ENST00000342192 PTPN12Q05209 780 aaKnown RBP14.67□□□□□ -0.06
UBE2L3-201ENST00000342192 TNNI3KQ59H18 835 aa14.67□□□□□ -0.06
UBE2L3-201ENST00000342192 SMAP1Q8IYB5 467 aaPredicted RBP14.67□□□□□ -0.06
UBE2L3-201ENST00000342192 TAF6LQ9Y6J9 622 aa14.67□□□□□ -0.06
UBE2L3-201ENST00000342192 FPGT-TNNI3KV9GXZ4 949 aa14.67□□□□□ -0.06
UBE2L3-201ENST00000342192 PTMAP06454 111 aaKnown RBP14.67□□□□□ -0.06
UBE2L3-201ENST00000342192 FMNL2Q96PY5 1086 aa14.67□□□□□ -0.06
UBE2L3-201ENST00000342192 FUCA2Q9BTY2 467 aa14.67□□□□□ -0.06
UBE2L3-201ENST00000342192 TAF5LO75529 589 aa14.66□□□□□ -0.06
UBE2L3-201ENST00000342192 HCLS1P14317 486 aaPredicted RBP14.66□□□□□ -0.06
UBE2L3-201ENST00000342192 LARP1BQ659C4 914 aaKnown RBP14.66□□□□□ -0.06
UBE2L3-201ENST00000342192 PDCP20941 246 aa14.66□□□□□ -0.06
UBE2L3-201ENST00000342192 TOB2Q14106 344 aaPredicted RBP14.66□□□□□ -0.06
UBE2L3-201ENST00000342192 TPRNQ4KMQ1 711 aa14.66□□□□□ -0.06
UBE2L3-201ENST00000342192 USPL1Q5W0Q7 1092 aa14.66□□□□□ -0.06
UBE2L3-201ENST00000342192 EDC3Q96F86 508 aaKnown RBP14.66□□□□□ -0.06
UBE2L3-201ENST00000342192 CYP27B1O15528 508 aa14.66□□□□□ -0.06
UBE2L3-201ENST00000342192 CSB-PGBD3P0DP91 1061 aa14.66□□□□□ -0.06
UBE2L3-201ENST00000342192 TFCP2Q12800 502 aa14.66□□□□□ -0.06
UBE2L3-201ENST00000342192 UBE3BQ7Z3V4 1068 aa14.66□□□□□ -0.06
UBE2L3-201ENST00000342192 USP25Q9UHP3 1055 aa14.66□□□□□ -0.06
UBE2L3-201ENST00000342192 PIP4K2AP48426 406 aaPredicted RBP14.65□□□□□ -0.06
UBE2L3-201ENST00000342192 CDC37L1Q7L3B6 337 aa14.65□□□□□ -0.06
UBE2L3-201ENST00000342192 TCEANC2Q96MN5 208 aa14.65□□□□□ -0.06
UBE2L3-201ENST00000342192 JARID2Q92833 1246 aaPredicted RBP14.65□□□□□ -0.06
UBE2L3-201ENST00000342192 DCCP43146 1447 aa14.64□□□□□ -0.07
UBE2L3-201ENST00000342192 KRT85P78386 507 aa14.64□□□□□ -0.07
UBE2L3-201ENST00000342192 KRT32Q14532 448 aa14.64□□□□□ -0.07
UBE2L3-201ENST00000342192 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.64□□□□□ -0.074e-8■■■□□ 16
UBE2L3-201ENST00000342192 ZNF609O15014 1411 aa14.64□□□□□ -0.07
UBE2L3-201ENST00000342192 GIMAP6Q6P9H5 292 aa14.64□□□□□ -0.07
UBE2L3-201ENST00000342192 ELP1O95163 1332 aa14.64□□□□□ -0.07
UBE2L3-201ENST00000342192 TNS3Q68CZ2 1445 aa14.64□□□□□ -0.07
UBE2L3-201ENST00000342192 CASP7P55210 303 aa14.63□□□□□ -0.07
UBE2L3-201ENST00000342192 A0A087WZG4 1122 aa14.63□□□□□ -0.07
UBE2L3-201ENST00000342192 TTC6Q86TZ1 520 aa14.63□□□□□ -0.07
UBE2L3-201ENST00000342192 PLBD2Q8NHP8 589 aa14.63□□□□□ -0.07
UBE2L3-201ENST00000342192 DDX17Q92841 729 aaKnown RBP14.63□□□□□ -0.07
UBE2L3-201ENST00000342192 ADCY5O95622 1261 aa14.63□□□□□ -0.07
UBE2L3-201ENST00000342192 ATF3P18847 181 aa14.63□□□□□ -0.07
UBE2L3-201ENST00000342192 KIAA2012Q0VF49 1180 aa14.63□□□□□ -0.07
UBE2L3-201ENST00000342192 PPP4R3BQ5MIZ7 849 aa14.63□□□□□ -0.07
UBE2L3-201ENST00000342192 IPO4Q8TEX9 1081 aaKnown RBP14.63□□□□□ -0.07
UBE2L3-201ENST00000342192 ZNF830Q96NB3 372 aaPredicted RBP14.63□□□□□ -0.07
UBE2L3-201ENST00000342192 HAUS7Q99871 368 aa14.63□□□□□ -0.07
UBE2L3-201ENST00000342192 DBNDD2Q9BQY9 259 aa14.63□□□□□ -0.07
UBE2L3-201ENST00000342192 ATP5J2-PTCD1G3V325 749 aa14.62□□□□□ -0.07
UBE2L3-201ENST00000342192 PTCD1O75127 700 aaKnown RBP14.62□□□□□ -0.07
UBE2L3-201ENST00000342192 CABP4P57796 275 aa14.62□□□□□ -0.07
UBE2L3-201ENST00000342192 FERMT3Q86UX7 667 aa14.62□□□□□ -0.07
UBE2L3-201ENST00000342192 U3KPZ7 1027 aaPredicted RBP14.62□□□□□ -0.07
UBE2L3-201ENST00000342192 NUP188Q5SRE5 1749 aa14.61□□□□□ -0.07
UBE2L3-201ENST00000342192 TMEM94Q12767 1356 aa14.61□□□□□ -0.07
UBE2L3-201ENST00000342192 KDM4AO75164 1064 aa14.61□□□□□ -0.07
UBE2L3-201ENST00000342192 CHRNA2Q15822 529 aa14.61□□□□□ -0.07
UBE2L3-201ENST00000342192 CABLES1Q8TDN4 633 aa14.61□□□□□ -0.07
UBE2L3-201ENST00000342192 DNAJC2Q99543 621 aaKnown RBP14.61□□□□□ -0.07
UBE2L3-201ENST00000342192 NEK1Q96PY6 1258 aa14.61□□□□□ -0.07
UBE2L3-201ENST00000342192 NDUFB9Q9Y6M9 179 aa14.61□□□□□ -0.07
UBE2L3-201ENST00000342192 TJP1Q07157 1748 aa14.61□□□□□ -0.07
UBE2L3-201ENST00000342192 ZBTB22O15209 634 aa14.6□□□□□ -0.07
UBE2L3-201ENST00000342192 GTF3C6Q969F1 213 aa14.6□□□□□ -0.07
UBE2L3-201ENST00000342192 CPDO75976 1380 aa14.6□□□□□ -0.07
UBE2L3-201ENST00000342192 UQCRHLA0A096LP55 91 aa14.6□□□□□ -0.07
UBE2L3-201ENST00000342192 UQCRHP07919 91 aa14.6□□□□□ -0.07
UBE2L3-201ENST00000342192 STK3Q13188 491 aa14.6□□□□□ -0.07
UBE2L3-201ENST00000342192 MCMDC2Q4G0Z9 681 aa14.6□□□□□ -0.07
UBE2L3-201ENST00000342192 CCDC129Q6ZRS4 1044 aa14.6□□□□□ -0.07
UBE2L3-201ENST00000342192 STRCP1A6NGW2 1772 aa14.6□□□□□ -0.07
UBE2L3-201ENST00000342192 PALLDQ8WX93 1383 aa14.6□□□□□ -0.07
UBE2L3-201ENST00000342192 SH3TC1Q8TE82 1336 aa14.6□□□□□ -0.07
UBE2L3-201ENST00000342192 FAM173BQ6P4H8 233 aa14.6□□□□□ -0.07
UBE2L3-201ENST00000342192 LMBR1LQ6UX01 489 aa14.6□□□□□ -0.07
UBE2L3-201ENST00000342192 SCAND2PQ9GZW5 306 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms