RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 TTLL11Q8NHH1 800 aa17.24■□□□□ 0.35
PMS1-201ENST00000342075 CTSWP56202 376 aa17.23■□□□□ 0.35
PMS1-201ENST00000342075 DDR1Q08345 913 aa17.23■□□□□ 0.35
PMS1-201ENST00000342075 PUS3Q9BZE2 481 aaKnown RBP17.23■□□□□ 0.35
PMS1-201ENST00000342075 CDHR2Q9BYE9 1310 aa17.23■□□□□ 0.35
PMS1-201ENST00000342075 OS9Q13438 667 aaPredicted RBP17.23■□□□□ 0.35
PMS1-201ENST00000342075 SLC51AQ86UW1 340 aa17.23■□□□□ 0.35
PMS1-201ENST00000342075 SEC31BQ9NQW1 1179 aa17.23■□□□□ 0.35
PMS1-201ENST00000342075 GTF2E1P29083 439 aaPredicted RBP17.22■□□□□ 0.35
PMS1-201ENST00000342075 LRRC24Q50LG9 513 aa17.22■□□□□ 0.35
PMS1-201ENST00000342075 TNRC6CQ9HCJ0 1690 aaKnown RBP17.22■□□□□ 0.35
PMS1-201ENST00000342075 CARMIL3Q8ND23 1372 aa17.22■□□□□ 0.35
PMS1-201ENST00000342075 PDE8AO60658 829 aa17.21■□□□□ 0.35
PMS1-201ENST00000342075 SASH1O94885 1247 aa17.21■□□□□ 0.35
PMS1-201ENST00000342075 LAMB2P55268 1798 aa17.21■□□□□ 0.35
PMS1-201ENST00000342075 SPEF2Q9C093 1822 aa17.21■□□□□ 0.35
PMS1-201ENST00000342075 NPHP1O15259 732 aa17.21■□□□□ 0.34
PMS1-201ENST00000342075 CSF1RP07333 972 aa17.21■□□□□ 0.34
PMS1-201ENST00000342075 ITGA6P23229 1130 aa17.21■□□□□ 0.34
PMS1-201ENST00000342075 RHPN1Q8TCX5 695 aa17.21■□□□□ 0.34
PMS1-201ENST00000342075 PLA2G12BQ9BX93 195 aa17.21■□□□□ 0.34
PMS1-201ENST00000342075 LRRCC1Q9C099 1032 aa17.21■□□□□ 0.34
PMS1-201ENST00000342075 STK32BQ9NY57 414 aa17.21■□□□□ 0.34
PMS1-201ENST00000342075 UPF1Q92900 1129 aaKnown RBP eCLIP17.2■□□□□ 0.34
PMS1-201ENST00000342075 ILDR2Q71H61 639 aa17.2■□□□□ 0.34
PMS1-201ENST00000342075 HDAC5Q9UQL6 1122 aa17.2■□□□□ 0.34
PMS1-201ENST00000342075 NOP58Q9Y2X3 529 aaKnown RBP17.19■□□□□ 0.34
PMS1-201ENST00000342075 TM4SF1P30408 202 aa17.19■□□□□ 0.34
PMS1-201ENST00000342075 CCDC57Q2TAC2 916 aa17.19■□□□□ 0.34
PMS1-201ENST00000342075 POLRMTO00411 1230 aaKnown RBP17.18■□□□□ 0.34
PMS1-201ENST00000342075 PRR5LQ6MZQ0 368 aa17.18■□□□□ 0.34
PMS1-201ENST00000342075 SERPINB2P05120 415 aa17.18■□□□□ 0.34
PMS1-201ENST00000342075 ATG9AQ7Z3C6 839 aa17.18■□□□□ 0.34
PMS1-201ENST00000342075 COPRSQ9NQ92 184 aa17.18■□□□□ 0.34
PMS1-201ENST00000342075 CNBD1Q8NA66 436 aa17.18■□□□□ 0.34
PMS1-201ENST00000342075 TLR7Q9NYK1 1049 aaKnown RBP17.18■□□□□ 0.34
PMS1-201ENST00000342075 TFCP2Q12800 502 aa17.17■□□□□ 0.34
PMS1-201ENST00000342075 G3BP1Q13283 466 aaKnown RBP eCLIP17.17■□□□□ 0.34
PMS1-201ENST00000342075 IFIT5Q13325 482 aaKnown RBP17.17■□□□□ 0.34
PMS1-201ENST00000342075 MMP10P09238 476 aa17.17■□□□□ 0.34
PMS1-201ENST00000342075 TPTE2Q6XPS3 522 aa17.17■□□□□ 0.34
PMS1-201ENST00000342075 PLEKHM2Q8IWE5 1019 aa17.17■□□□□ 0.34
PMS1-201ENST00000342075 TAF7LQ5H9L4 462 aa17.15■□□□□ 0.34
PMS1-201ENST00000342075 SNAP23O00161 211 aa17.15■□□□□ 0.34
PMS1-201ENST00000342075 KIF1BPQ96EK5 621 aa17.15■□□□□ 0.34
PMS1-201ENST00000342075 CCDC8Q9H0W5 538 aaPredicted RBP17.15■□□□□ 0.34
PMS1-201ENST00000342075 ZBTB47Q9UFB7 747 aaPredicted RBP17.15■□□□□ 0.34
PMS1-201ENST00000342075 EAF2Q96CJ1 260 aaPredicted RBP17.15■□□□□ 0.34
PMS1-201ENST00000342075 NYXQ9GZU5 481 aa17.15■□□□□ 0.34
PMS1-201ENST00000342075 RGL2O15211 777 aa17.14■□□□□ 0.33
PMS1-201ENST00000342075 HELBQ8NG08 1087 aaPredicted RBP17.14■□□□□ 0.33
PMS1-201ENST00000342075 ANKRD18BA2A2Z9 1011 aa17.14■□□□□ 0.33
PMS1-201ENST00000342075 WTIPA6NIX2 430 aaPredicted RBP17.14■□□□□ 0.33
PMS1-201ENST00000342075 RAB11FIP3O75154 756 aa17.13■□□□□ 0.33
PMS1-201ENST00000342075 AACSQ86V21 672 aa17.13■□□□□ 0.33
PMS1-201ENST00000342075 CELF1Q92879 486 aaKnown RBP17.13■□□□□ 0.33
PMS1-201ENST00000342075 EYA2O00167 538 aa17.13■□□□□ 0.33
PMS1-201ENST00000342075 LDHAL6AQ6ZMR3 332 aa17.13■□□□□ 0.33
PMS1-201ENST00000342075 SALL3Q9BXA9 1300 aa17.13■□□□□ 0.33
PMS1-201ENST00000342075 PSDA5PKW4 1024 aaPredicted RBP17.13■□□□□ 0.33
PMS1-201ENST00000342075 GSPT1P15170 499 aaKnown RBP17.13■□□□□ 0.33
PMS1-201ENST00000342075 CCDC152Q4G0S7 254 aa17.13■□□□□ 0.33
PMS1-201ENST00000342075 CCDC125Q86Z20 511 aa17.13■□□□□ 0.33
PMS1-201ENST00000342075 NLGN1Q8N2Q7 840 aa17.13■□□□□ 0.33
PMS1-201ENST00000342075 ANKRD31Q8N7Z5 1873 aa17.13■□□□□ 0.33
PMS1-201ENST00000342075 FLAD1Q8NFF5 587 aa17.13■□□□□ 0.33
PMS1-201ENST00000342075 RIC1Q4ADV7 1423 aa17.12■□□□□ 0.33
PMS1-201ENST00000342075 SLC10A5Q5PT55 438 aa17.12■□□□□ 0.33
PMS1-201ENST00000342075 R3HDM1Q15032 1099 aaKnown RBP17.12■□□□□ 0.33
PMS1-201ENST00000342075 QSER1Q2KHR3 1735 aa17.11■□□□□ 0.33
PMS1-201ENST00000342075 ZBTB7AO95365 584 aa17.11■□□□□ 0.33
PMS1-201ENST00000342075 MAP4K4O95819 1239 aaPredicted RBP17.11■□□□□ 0.33
PMS1-201ENST00000342075 NLRP3Q96P20 1036 aa17.11■□□□□ 0.33
PMS1-201ENST00000342075 PDE1AP54750 535 aa17.11■□□□□ 0.33
PMS1-201ENST00000342075 TIMM10P62072 90 aa17.11■□□□□ 0.33
PMS1-201ENST00000342075 HSP90AB4PQ58FF6 505 aa17.11■□□□□ 0.33
PMS1-201ENST00000342075 CNNM1Q9NRU3 951 aa17.11■□□□□ 0.33
PMS1-201ENST00000342075 TAF5LO75529 589 aa17.1■□□□□ 0.33
PMS1-201ENST00000342075 MX1P20591 662 aa17.1■□□□□ 0.33
PMS1-201ENST00000342075 RIPOR2Q9Y4F9 1068 aa17.1■□□□□ 0.33
PMS1-201ENST00000342075 NDUFB9Q9Y6M9 179 aa17.1■□□□□ 0.33
PMS1-201ENST00000342075 SF3B3Q15393 1217 aaKnown RBP17.1■□□□□ 0.33
PMS1-201ENST00000342075 TNNI3KQ59H18 835 aa17.1■□□□□ 0.33
PMS1-201ENST00000342075 CLASRPQ8N2M8 674 aaKnown RBP17.1■□□□□ 0.33
PMS1-201ENST00000342075 FPGT-TNNI3KV9GXZ4 949 aa17.1■□□□□ 0.33
PMS1-201ENST00000342075 LRP5O75197 1615 aa17.09■□□□□ 0.33
PMS1-201ENST00000342075 ERC1Q8IUD2 1116 aa17.09■□□□□ 0.33
PMS1-201ENST00000342075 DBNDD2Q9BQY9 259 aa17.09■□□□□ 0.33
PMS1-201ENST00000342075 DBNLQ9UJU6 430 aaKnown RBP17.09■□□□□ 0.33
PMS1-201ENST00000342075 ST5P78524 1137 aa17.08■□□□□ 0.33
PMS1-201ENST00000342075 PARP3Q9Y6F1 533 aa17.08■□□□□ 0.33
PMS1-201ENST00000342075 NRXN2Q9P2S2 1712 aa17.08■□□□□ 0.33
PMS1-201ENST00000342075 ADORA1P30542 326 aa17.08■□□□□ 0.32
PMS1-201ENST00000342075 IL15P40933 162 aaPredicted RBP17.08■□□□□ 0.32
PMS1-201ENST00000342075 C8orf34Q49A92 452 aa17.08■□□□□ 0.32
PMS1-201ENST00000342075 METTL24Q5JXM2 366 aa17.08■□□□□ 0.32
PMS1-201ENST00000342075 NEUROD6Q96NK8 337 aa17.08■□□□□ 0.32
PMS1-201ENST00000342075 MPHOSPH8Q99549 860 aa17.08■□□□□ 0.32
PMS1-201ENST00000342075 ATF5Q9Y2D1 282 aaPredicted RBP17.07■□□□□ 0.32
PMS1-201ENST00000342075 IFIT2P09913 472 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms