RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 EPHA10Q5JZY3 1008 aa16.66■□□□□ 0.26
TUBD1-202ENST00000340993 STYK1Q6J9G0 422 aa16.66■□□□□ 0.26
TUBD1-202ENST00000340993 ARHGAP27Q6ZUM4 889 aa16.66■□□□□ 0.26
TUBD1-202ENST00000340993 DDX46Q7L014 1031 aaKnown RBP16.66■□□□□ 0.26
TUBD1-202ENST00000340993 ITPRIPQ8IWB1 547 aa16.66■□□□□ 0.26
TUBD1-202ENST00000340993 CCT4P50991 539 aaKnown RBP16.66■□□□□ 0.26
TUBD1-202ENST00000340993 CASP7P55210 303 aa16.66■□□□□ 0.26
TUBD1-202ENST00000340993 CTSWP56202 376 aa16.66■□□□□ 0.26
TUBD1-202ENST00000340993 CNKSR1Q969H4 720 aa16.66■□□□□ 0.26
TUBD1-202ENST00000340993 MEIS3Q99687 375 aa16.66■□□□□ 0.26
TUBD1-202ENST00000340993 GREM2Q9H772 168 aa16.66■□□□□ 0.26
TUBD1-202ENST00000340993 CDHR2Q9BYE9 1310 aa16.65■□□□□ 0.26
TUBD1-202ENST00000340993 KLRG2A4D1S0 409 aaPredicted RBP16.65■□□□□ 0.26
TUBD1-202ENST00000340993 RASSF7Q02833 373 aa16.65■□□□□ 0.26
TUBD1-202ENST00000340993 FAM161AQ3B820 660 aa16.65■□□□□ 0.26
TUBD1-202ENST00000340993 C20orf194Q5TEA3 1177 aa16.65■□□□□ 0.26
TUBD1-202ENST00000340993 DZIP1LQ8IYY4 767 aaKnown RBP16.65■□□□□ 0.26
TUBD1-202ENST00000340993 ARHGAP45Q92619 1136 aa16.65■□□□□ 0.26
TUBD1-202ENST00000340993 CELF1Q92879 486 aaKnown RBP16.65■□□□□ 0.26
TUBD1-202ENST00000340993 USP44Q9H0E7 712 aa16.64■□□□□ 0.25
TUBD1-202ENST00000340993 CCDC88AQ3V6T2 1871 aa16.64■□□□□ 0.25
TUBD1-202ENST00000340993 RIC1Q4ADV7 1423 aa16.64■□□□□ 0.25
TUBD1-202ENST00000340993 PPEF1O14829 653 aaPredicted RBP16.64■□□□□ 0.25
TUBD1-202ENST00000340993 CCDC152Q4G0S7 254 aa16.64■□□□□ 0.25
TUBD1-202ENST00000340993 C1orf115Q9H7X2 142 aa16.64■□□□□ 0.25
TUBD1-202ENST00000340993 LMBR1LQ6UX01 489 aa16.63■□□□□ 0.25
TUBD1-202ENST00000340993 TTLL11Q8NHH1 800 aa16.63■□□□□ 0.25
TUBD1-202ENST00000340993 BICC1Q9H694 974 aaKnown RBP16.63■□□□□ 0.25
TUBD1-202ENST00000340993 UBTFL1P0CB47 393 aaPredicted RBP16.62■□□□□ 0.25
TUBD1-202ENST00000340993 ALDH1B1P30837 517 aa16.62■□□□□ 0.25
TUBD1-202ENST00000340993 PDZRN3Q9UPQ7 1066 aa16.62■□□□□ 0.25
TUBD1-202ENST00000340993 COG6Q9Y2V7 657 aa16.62■□□□□ 0.25
TUBD1-202ENST00000340993 FOXO4P98177 505 aa16.61■□□□□ 0.25
TUBD1-202ENST00000340993 GRAPQ13588 217 aa16.61■□□□□ 0.25
TUBD1-202ENST00000340993 SF3B3Q15393 1217 aaKnown RBP16.61■□□□□ 0.25
TUBD1-202ENST00000340993 GRAPLQ8TC17 118 aaPredicted RBP16.61■□□□□ 0.25
TUBD1-202ENST00000340993 KAZALD1Q96I82 304 aa16.61■□□□□ 0.25
TUBD1-202ENST00000340993 LRRFIP2Q9Y608 721 aaKnown RBP16.61■□□□□ 0.25
TUBD1-202ENST00000340993 ITGA6P23229 1130 aa16.61■□□□□ 0.25
TUBD1-202ENST00000340993 INTS3Q68E01 1043 aaKnown RBP16.61■□□□□ 0.25
TUBD1-202ENST00000340993 ZNF594Q96JF6 807 aaPredicted RBP16.61■□□□□ 0.25
TUBD1-202ENST00000340993 HSP90B1P14625 803 aaKnown RBP16.6■□□□□ 0.25
TUBD1-202ENST00000340993 HOXA10P31260 410 aaPredicted RBP16.6■□□□□ 0.25
TUBD1-202ENST00000340993 CRAMP1Q96RY5 1269 aa16.6■□□□□ 0.25
TUBD1-202ENST00000340993 GRIN3BO60391 1043 aa16.59■□□□□ 0.25
TUBD1-202ENST00000340993 CHD4Q14839 1912 aa16.59■□□□□ 0.25
TUBD1-202ENST00000340993 TAF7LQ5H9L4 462 aa16.59■□□□□ 0.25
TUBD1-202ENST00000340993 ANKRD18AQ8IVF6 992 aa16.59■□□□□ 0.25
TUBD1-202ENST00000340993 KLHDC4Q8TBB5 520 aa16.59■□□□□ 0.25
TUBD1-202ENST00000340993 FER1L6Q2WGJ9 1857 aa16.58■□□□□ 0.25
TUBD1-202ENST00000340993 RRP1P56182 461 aaKnown RBP16.58■□□□□ 0.24
TUBD1-202ENST00000340993 ANKRD44Q8N8A2 993 aa16.58■□□□□ 0.24
TUBD1-202ENST00000340993 GPR101Q96P66 508 aaPredicted RBP16.58■□□□□ 0.24
TUBD1-202ENST00000340993 PLA2G12BQ9BX93 195 aa16.58■□□□□ 0.24
TUBD1-202ENST00000340993 UTYO14607 1347 aa16.58■□□□□ 0.24
TUBD1-202ENST00000340993 SBF1O95248 1867 aa16.57■□□□□ 0.24
TUBD1-202ENST00000340993 NFKBIEO00221 500 aa16.57■□□□□ 0.24
TUBD1-202ENST00000340993 RPS8P62241 208 aaKnown RBP16.57■□□□□ 0.24
TUBD1-202ENST00000340993 CCDC93Q567U6 631 aa16.57■□□□□ 0.24
TUBD1-202ENST00000340993 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.57■□□□□ 0.24
TUBD1-202ENST00000340993 C7orf43Q8WVR3 580 aa16.57■□□□□ 0.24
TUBD1-202ENST00000340993 ZNF277Q9NRM2 450 aaPredicted RBP16.57■□□□□ 0.24
TUBD1-202ENST00000340993 ANKRD18BA2A2Z9 1011 aa16.56■□□□□ 0.24
TUBD1-202ENST00000340993 IFIT5Q13325 482 aaKnown RBP16.56■□□□□ 0.24
TUBD1-202ENST00000340993 CCDC57Q2TAC2 916 aa16.56■□□□□ 0.24
TUBD1-202ENST00000340993 TMX4Q9H1E5 349 aaPredicted RBP16.56■□□□□ 0.24
TUBD1-202ENST00000340993 SUPT16HQ9Y5B9 1047 aaKnown RBP16.56■□□□□ 0.24
TUBD1-202ENST00000340993 CSF1RP07333 972 aa16.56■□□□□ 0.24
TUBD1-202ENST00000340993 PRELPP51888 382 aa16.56■□□□□ 0.24
TUBD1-202ENST00000340993 IRX6P78412 446 aaPredicted RBP16.56■□□□□ 0.24
TUBD1-202ENST00000340993 CDC5LQ99459 802 aaKnown RBP16.56■□□□□ 0.24
TUBD1-202ENST00000340993 IGHMBP2P38935 993 aaKnown RBP16.55■□□□□ 0.24
TUBD1-202ENST00000340993 MPHOSPH8Q99549 860 aa16.55■□□□□ 0.24
TUBD1-202ENST00000340993 TAOK3Q9H2K8 898 aa16.55■□□□□ 0.24
TUBD1-202ENST00000340993 RNF181Q9P0P0 153 aa16.55■□□□□ 0.24
TUBD1-202ENST00000340993 NSFL1CQ9UNZ2 370 aaKnown RBP16.55■□□□□ 0.24
TUBD1-202ENST00000340993 ATP6V0A2Q9Y487 856 aa16.55■□□□□ 0.24
TUBD1-202ENST00000340993 WTIPA6NIX2 430 aaPredicted RBP16.54■□□□□ 0.24
TUBD1-202ENST00000340993 BBOX1O75936 387 aa16.54■□□□□ 0.24
TUBD1-202ENST00000340993 GNAI3P08754 354 aa16.54■□□□□ 0.24
TUBD1-202ENST00000340993 GPSM2P81274 684 aa16.54■□□□□ 0.24
TUBD1-202ENST00000340993 MVPQ14764 893 aaKnown RBP16.54■□□□□ 0.24
TUBD1-202ENST00000340993 HELBQ8NG08 1087 aaPredicted RBP16.54■□□□□ 0.24
TUBD1-202ENST00000340993 SIL1Q9H173 461 aa16.54■□□□□ 0.24
TUBD1-202ENST00000340993 ANKIB1Q9P2G1 1089 aa16.54■□□□□ 0.24
TUBD1-202ENST00000340993 C9orf131Q5VYM1 1079 aa16.54■□□□□ 0.24
TUBD1-202ENST00000340993 DPP8Q6V1X1 898 aaPredicted RBP16.54■□□□□ 0.24
TUBD1-202ENST00000340993 PUS3Q9BZE2 481 aaKnown RBP16.54■□□□□ 0.24
TUBD1-202ENST00000340993 GNAI2P04899 355 aa16.53■□□□□ 0.24
TUBD1-202ENST00000340993 ZNF526Q8TF50 670 aaPredicted RBP16.53■□□□□ 0.24
TUBD1-202ENST00000340993 PA2G4Q9UQ80 394 aaKnown RBP16.53■□□□□ 0.24
TUBD1-202ENST00000340993 LRRC37AA6NMS7 1700 aa16.52■□□□□ 0.24
TUBD1-202ENST00000340993 C6orf229H3BNL8 230 aa16.52■□□□□ 0.24
TUBD1-202ENST00000340993 SNAP23O00161 211 aa16.52■□□□□ 0.24
TUBD1-202ENST00000340993 SP8Q8IXZ3 490 aa16.52■□□□□ 0.24
TUBD1-202ENST00000340993 MPNDQ8N594 471 aa16.52■□□□□ 0.24
TUBD1-202ENST00000340993 CNNM1Q9NRU3 951 aa16.52■□□□□ 0.24
TUBD1-202ENST00000340993 RIMBP2O15034 1052 aa16.51■□□□□ 0.23
TUBD1-202ENST00000340993 ZBTB7BO15156 539 aaPredicted RBP16.51■□□□□ 0.23
TUBD1-202ENST00000340993 TAF5LO75529 589 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms