RNA–Protein interactions for RNA: ENST00000340650.5

NHLRC1-201, Transcript of NHL repeat containing E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 BASIC

Gene NHLRC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1-201ENST00000340650 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.52■■□□□ 1.36
NHLRC1-201ENST00000340650 MTX1Q13505 466 aa23.51■■□□□ 1.35
NHLRC1-201ENST00000340650 PTMAP06454 111 aaKnown RBP23.51■■□□□ 1.35
NHLRC1-201ENST00000340650 HDAC5Q9UQL6 1122 aa23.51■■□□□ 1.35
NHLRC1-201ENST00000340650 GADD45BO75293 160 aaPredicted RBP23.5■■□□□ 1.35
NHLRC1-201ENST00000340650 MEX3CQ5U5Q3 659 aaKnown RBP23.5■■□□□ 1.35
NHLRC1-201ENST00000340650 UBE3BQ7Z3V4 1068 aa23.5■■□□□ 1.35
NHLRC1-201ENST00000340650 USP48Q86UV5 1035 aa23.5■■□□□ 1.35
NHLRC1-201ENST00000340650 RILPL2Q969X0 211 aa23.49■■□□□ 1.35
NHLRC1-201ENST00000340650 PA2G4Q9UQ80 394 aaKnown RBP23.49■■□□□ 1.35
NHLRC1-201ENST00000340650 A0A087WZG4 1122 aa23.49■■□□□ 1.35
NHLRC1-201ENST00000340650 EPHA10Q5JZY3 1008 aa23.49■■□□□ 1.35
NHLRC1-201ENST00000340650 TRIM6-TRIM34B2RNG4 842 aa23.48■■□□□ 1.35
NHLRC1-201ENST00000340650 NOL8Q76FK4 1167 aaKnown RBP23.48■■□□□ 1.35
NHLRC1-201ENST00000340650 KCNQ2O43526 872 aa23.48■■□□□ 1.35
NHLRC1-201ENST00000340650 CYP19A1P11511 503 aaPredicted RBP23.48■■□□□ 1.35
NHLRC1-201ENST00000340650 RPAP1Q9BWH6 1393 aaPredicted RBP23.48■■□□□ 1.35
NHLRC1-201ENST00000340650 HSPA4P34932 840 aa23.47■■□□□ 1.35
NHLRC1-201ENST00000340650 OS9Q13438 667 aaPredicted RBP23.47■■□□□ 1.35
NHLRC1-201ENST00000340650 RHPN1Q8TCX5 695 aa23.47■■□□□ 1.35
NHLRC1-201ENST00000340650 AFDNP55196 1824 aaKnown RBP23.47■■□□□ 1.35
NHLRC1-201ENST00000340650 RAB11FIP3O75154 756 aa23.47■■□□□ 1.35
NHLRC1-201ENST00000340650 UPF3BQ9BZI7 483 aaKnown RBP23.47■■□□□ 1.35
NHLRC1-201ENST00000340650 ZBTB1Q9Y2K1 713 aa23.46■■□□□ 1.35
NHLRC1-201ENST00000340650 CCDC183Q5T5S1 534 aa23.45■■□□□ 1.35
NHLRC1-201ENST00000340650 GDPD2Q9HCC8 539 aa23.45■■□□□ 1.35
NHLRC1-201ENST00000340650 NUTM1Q86Y26 1132 aa23.45■■□□□ 1.34
NHLRC1-201ENST00000340650 NUP188Q5SRE5 1749 aa23.45■■□□□ 1.34
NHLRC1-201ENST00000340650 KLHL34Q8N239 644 aa23.44■■□□□ 1.34
NHLRC1-201ENST00000340650 MYRIPQ8NFW9 859 aa23.44■■□□□ 1.34
NHLRC1-201ENST00000340650 KIF1BPQ96EK5 621 aa23.44■■□□□ 1.34
NHLRC1-201ENST00000340650 LETM1O95202 739 aaPredicted RBP23.44■■□□□ 1.34
NHLRC1-201ENST00000340650 KIF6Q6ZMV9 814 aa23.44■■□□□ 1.34
NHLRC1-201ENST00000340650 KLHDC4Q8TBB5 520 aa23.44■■□□□ 1.34
NHLRC1-201ENST00000340650 PIBF1Q8WXW3 757 aa23.44■■□□□ 1.34
NHLRC1-201ENST00000340650 CWC25Q9NXE8 425 aaPredicted RBP23.44■■□□□ 1.34
NHLRC1-201ENST00000340650 HSP90AB4PQ58FF6 505 aa23.43■■□□□ 1.34
NHLRC1-201ENST00000340650 SIL1Q9H173 461 aa23.43■■□□□ 1.34
NHLRC1-201ENST00000340650 ATP6V1AP38606 617 aa23.42■■□□□ 1.34
NHLRC1-201ENST00000340650 CASP7P55210 303 aa23.42■■□□□ 1.34
NHLRC1-201ENST00000340650 PRIMPOLQ96LW4 560 aa23.42■■□□□ 1.34
NHLRC1-201ENST00000340650 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.42■■□□□ 1.34
NHLRC1-201ENST00000340650 IL25Q9H293 177 aa23.41■■□□□ 1.34
NHLRC1-201ENST00000340650 LOC102724428A0A0B4J2F2 783 aa23.41■■□□□ 1.34
NHLRC1-201ENST00000340650 SIK1P57059 783 aa23.41■■□□□ 1.34
NHLRC1-201ENST00000340650 FOXD4L6Q3SYB3 417 aaPredicted RBP23.41■■□□□ 1.34
NHLRC1-201ENST00000340650 FAM182BQ5T319 152 aa23.41■■□□□ 1.34
NHLRC1-201ENST00000340650 FOXD4L3Q6VB84 417 aaPredicted RBP23.41■■□□□ 1.34
NHLRC1-201ENST00000340650 AFF2P51816 1311 aa23.41■■□□□ 1.34
NHLRC1-201ENST00000340650 TCHHQ07283 1943 aa23.4■■□□□ 1.34
NHLRC1-201ENST00000340650 ZSCAN22P10073 491 aaPredicted RBP23.4■■□□□ 1.34
NHLRC1-201ENST00000340650 CCDC191Q8NCU4 936 aa23.4■■□□□ 1.34
NHLRC1-201ENST00000340650 TTC14Q96N46 770 aa23.4■■□□□ 1.34
NHLRC1-201ENST00000340650 USP25Q9UHP3 1055 aa23.4■■□□□ 1.34
NHLRC1-201ENST00000340650 TJP1Q07157 1748 aa23.4■■□□□ 1.34
NHLRC1-201ENST00000340650 RAD50Q92878 1312 aa23.4■■□□□ 1.34
NHLRC1-201ENST00000340650 PALLDQ8WX93 1383 aa23.4■■□□□ 1.34
NHLRC1-201ENST00000340650 H7C1W4 665 aa23.39■■□□□ 1.34
NHLRC1-201ENST00000340650 TCIRG1Q13488 830 aa23.39■■□□□ 1.34
NHLRC1-201ENST00000340650 HLFQ16534 295 aa23.39■■□□□ 1.34
NHLRC1-201ENST00000340650 UBE2HP62256 183 aa23.39■■□□□ 1.33
NHLRC1-201ENST00000340650 PTF1AQ7RTS3 328 aa23.39■■□□□ 1.33
NHLRC1-201ENST00000340650 SMAP1Q8IYB5 467 aaPredicted RBP23.39■■□□□ 1.33
NHLRC1-201ENST00000340650 CNPY2Q9Y2B0 182 aa23.39■■□□□ 1.33
NHLRC1-201ENST00000340650 ADCY5O95622 1261 aa23.38■■□□□ 1.33
NHLRC1-201ENST00000340650 GTF2F1P35269 517 aaKnown RBP eCLIP23.38■■□□□ 1.33
NHLRC1-201ENST00000340650 HMGN5P82970 282 aaKnown RBP23.38■■□□□ 1.33
NHLRC1-201ENST00000340650 ITPK1Q13572 414 aa23.38■■□□□ 1.33
NHLRC1-201ENST00000340650 NOLC1Q14978 699 aaKnown RBP eCLIP23.38■■□□□ 1.33
NHLRC1-201ENST00000340650 MAP3K15Q6ZN16 1313 aa23.38■■□□□ 1.33
NHLRC1-201ENST00000340650 PRDM4Q9UKN5 801 aa23.38■■□□□ 1.33
NHLRC1-201ENST00000340650 SGSM2O43147 1006 aa23.37■■□□□ 1.33
NHLRC1-201ENST00000340650 G3BP1Q13283 466 aaKnown RBP eCLIP23.37■■□□□ 1.33
NHLRC1-201ENST00000340650 ISCA1Q9BUE6 129 aa23.37■■□□□ 1.33
NHLRC1-201ENST00000340650 SNX14Q9Y5W7 946 aa23.37■■□□□ 1.33
NHLRC1-201ENST00000340650 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.37■■□□□ 1.33
NHLRC1-201ENST00000340650 LMBR1LQ6UX01 489 aa23.37■■□□□ 1.33
NHLRC1-201ENST00000340650 GJD4Q96KN9 370 aaPredicted RBP23.37■■□□□ 1.33
NHLRC1-201ENST00000340650 SPTLC3Q9NUV7 552 aa23.37■■□□□ 1.33
NHLRC1-201ENST00000340650 TBC1D2BQ9UPU7 963 aa23.37■■□□□ 1.33
NHLRC1-201ENST00000340650 CHMP3Q9Y3E7 222 aa23.37■■□□□ 1.33
NHLRC1-201ENST00000340650 RABL6Q3YEC7 729 aaPredicted RBP23.36■■□□□ 1.33
NHLRC1-201ENST00000340650 SASH1O94885 1247 aa23.36■■□□□ 1.33
NHLRC1-201ENST00000340650 GPTP24298 496 aa23.36■■□□□ 1.33
NHLRC1-201ENST00000340650 CRKLP46109 303 aaKnown RBP23.36■■□□□ 1.33
NHLRC1-201ENST00000340650 DNTTIP2Q5QJE6 756 aaKnown RBP23.36■■□□□ 1.33
NHLRC1-201ENST00000340650 ERC1Q8IUD2 1116 aa23.36■■□□□ 1.33
NHLRC1-201ENST00000340650 STX6O43752 255 aa23.35■■□□□ 1.33
NHLRC1-201ENST00000340650 FOXO4P98177 505 aa23.35■■□□□ 1.33
NHLRC1-201ENST00000340650 INTS5Q6P9B9 1019 aaKnown RBP23.35■■□□□ 1.33
NHLRC1-201ENST00000340650 CLASRPQ8N2M8 674 aaKnown RBP23.35■■□□□ 1.33
NHLRC1-201ENST00000340650 PI4K2BQ8TCG2 481 aa23.35■■□□□ 1.33
NHLRC1-201ENST00000340650 LSG1Q9H089 658 aaKnown RBP23.35■■□□□ 1.33
NHLRC1-201ENST00000340650 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.35■■□□□ 1.33
NHLRC1-201ENST00000340650 HCLS1P14317 486 aaPredicted RBP23.35■■□□□ 1.33
NHLRC1-201ENST00000340650 IL6STP40189 918 aaPredicted RBP23.35■■□□□ 1.33
NHLRC1-201ENST00000340650 GIGYF2Q6Y7W6 1299 aaKnown RBP23.35■■□□□ 1.33
NHLRC1-201ENST00000340650 ZNF830Q96NB3 372 aaPredicted RBP23.35■■□□□ 1.33
NHLRC1-201ENST00000340650 FUCA2Q9BTY2 467 aa23.35■■□□□ 1.33
NHLRC1-201ENST00000340650 LIMCH1Q9UPQ0 1083 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms