RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 GOLGA6L9A6NEM1 432 aa17.14■□□□□ 0.34
RRP1B-201ENST00000340648 SGSM2O43147 1006 aa17.14■□□□□ 0.34
RRP1B-201ENST00000340648 MARCKSP29966 332 aaPredicted RBP17.14■□□□□ 0.34
RRP1B-201ENST00000340648 CWF19L2Q2TBE0 894 aaKnown RBP17.14■□□□□ 0.34
RRP1B-201ENST00000340648 LRP2BPQ9P2M1 347 aa17.14■□□□□ 0.34
RRP1B-201ENST00000340648 CHL1O00533 1208 aa17.14■□□□□ 0.33
RRP1B-201ENST00000340648 KCNG4Q8TDN1 519 aa17.14■□□□□ 0.33
RRP1B-201ENST00000340648 IARSP41252 1262 aaKnown RBP17.14■□□□□ 0.33
RRP1B-201ENST00000340648 PHF8Q9UPP1 1060 aa17.14■□□□□ 0.33
RRP1B-201ENST00000340648 RTL1A6NKG5 1358 aa17.14■□□□□ 0.33
RRP1B-201ENST00000340648 SSRP1Q08945 709 aaKnown RBP17.14■□□□□ 0.33
RRP1B-201ENST00000340648 MCMDC2Q4G0Z9 681 aa17.14■□□□□ 0.33
RRP1B-201ENST00000340648 IFIT3O14879 490 aaKnown RBP17.13■□□□□ 0.33
RRP1B-201ENST00000340648 CHST3Q7LGC8 479 aa17.13■□□□□ 0.33
RRP1B-201ENST00000340648 CBX8Q9HC52 389 aa17.13■□□□□ 0.33
RRP1B-201ENST00000340648 IFNKQ9P0W0 207 aa17.13■□□□□ 0.33
RRP1B-201ENST00000340648 RAD50Q92878 1312 aa17.13■□□□□ 0.33
RRP1B-201ENST00000340648 GNL3LQ9NVN8 582 aaKnown RBP17.13■□□□□ 0.33
RRP1B-201ENST00000340648 ALDH1L1O75891 902 aa17.13■□□□□ 0.33
RRP1B-201ENST00000340648 APOBRQ0VD83 1088 aa17.13■□□□□ 0.33
RRP1B-201ENST00000340648 MINDY4BA8MYZ0 360 aa17.13■□□□□ 0.33
RRP1B-201ENST00000340648 METAP2P50579 478 aaKnown RBP eCLIP17.13■□□□□ 0.33
RRP1B-201ENST00000340648 PLEKHF1Q96S99 279 aa17.13■□□□□ 0.33
RRP1B-201ENST00000340648 BCL2L12Q9HB09 334 aa17.13■□□□□ 0.33
RRP1B-201ENST00000340648 KSR2Q6VAB6 950 aa17.12■□□□□ 0.33
RRP1B-201ENST00000340648 ZBTB9Q96C00 473 aa17.12■□□□□ 0.33
RRP1B-201ENST00000340648 PBRM1Q86U86 1689 aa17.12■□□□□ 0.33
RRP1B-201ENST00000340648 SYNMO15061 1565 aa17.12■□□□□ 0.33
RRP1B-201ENST00000340648 EYA1Q99502 592 aa17.12■□□□□ 0.33
RRP1B-201ENST00000340648 ZBTB3Q9H5J0 574 aa17.12■□□□□ 0.33
RRP1B-201ENST00000340648 PTPDC1A2A3K4 754 aa17.12■□□□□ 0.33
RRP1B-201ENST00000340648 NCOA7Q8NI08 942 aa17.12■□□□□ 0.33
RRP1B-201ENST00000340648 ARFGAP3Q9NP61 516 aa17.12■□□□□ 0.33
RRP1B-201ENST00000340648 YTHDC2Q9H6S0 1430 aaKnown RBP17.12■□□□□ 0.33
RRP1B-201ENST00000340648 ERVK-7P63135 1459 aa17.12■□□□□ 0.33
RRP1B-201ENST00000340648 ABCF2Q9UG63 623 aa17.12■□□□□ 0.33
RRP1B-201ENST00000340648 LIG1P18858 919 aa17.11■□□□□ 0.33
RRP1B-201ENST00000340648 HSPA4P34932 840 aa17.11■□□□□ 0.33
RRP1B-201ENST00000340648 MAP9Q49MG5 647 aa17.11■□□□□ 0.33
RRP1B-201ENST00000340648 ERBB4Q15303 1308 aa17.11■□□□□ 0.33
RRP1B-201ENST00000340648 ZNF75DP51815 510 aa17.11■□□□□ 0.33
RRP1B-201ENST00000340648 LUC7LQ9NQ29 371 aaKnown RBP17.11■□□□□ 0.33
RRP1B-201ENST00000340648 KRT18P05783 430 aaKnown RBP17.11■□□□□ 0.33
RRP1B-201ENST00000340648 GTF3C6Q969F1 213 aa17.11■□□□□ 0.33
RRP1B-201ENST00000340648 SPTLC2O15270 562 aa17.1■□□□□ 0.33
RRP1B-201ENST00000340648 SLC26A6Q9BXS9 759 aa17.1■□□□□ 0.33
RRP1B-201ENST00000340648 IFIT5Q13325 482 aaKnown RBP17.1■□□□□ 0.33
RRP1B-201ENST00000340648 CT47A1Q5JQC4 288 aaPredicted RBP17.1■□□□□ 0.33
RRP1B-201ENST00000340648 XAGE3Q8WTP9 111 aa17.1■□□□□ 0.33
RRP1B-201ENST00000340648 RNF216Q9NWF9 866 aaPredicted RBP17.1■□□□□ 0.33
RRP1B-201ENST00000340648 KDM5DQ9BY66 1539 aa17.1■□□□□ 0.33
RRP1B-201ENST00000340648 CCDC196A0A1B0GTZ2 297 aa17.1■□□□□ 0.33
RRP1B-201ENST00000340648 MCM6Q14566 821 aa17.1■□□□□ 0.33
RRP1B-201ENST00000340648 TMEM67Q5HYA8 995 aa17.1■□□□□ 0.33
RRP1B-201ENST00000340648 CDC37L1Q7L3B6 337 aa17.1■□□□□ 0.33
RRP1B-201ENST00000340648 ZNF518AQ6AHZ1 1483 aa17.1■□□□□ 0.33
RRP1B-201ENST00000340648 ANKRD13DQ6ZTN6 518 aa17.1■□□□□ 0.33
RRP1B-201ENST00000340648 CLSTN2Q9H4D0 955 aa17.1■□□□□ 0.33
RRP1B-201ENST00000340648 ZHX3Q9H4I2 956 aa17.1■□□□□ 0.33
RRP1B-201ENST00000340648 POTEB2H3BUK9 544 aa17.09■□□□□ 0.33
RRP1B-201ENST00000340648 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.09■□□□□ 0.33
RRP1B-201ENST00000340648 ALG1Q9BT22 464 aa17.09■□□□□ 0.33
RRP1B-201ENST00000340648 ODF2Q5BJF6 829 aa17.09■□□□□ 0.33
RRP1B-201ENST00000340648 TXLNBQ8N3L3 684 aa17.09■□□□□ 0.33
RRP1B-201ENST00000340648 COPS6Q7L5N1 327 aa17.09■□□□□ 0.33
RRP1B-201ENST00000340648 FAM227BQ96M60 508 aa17.09■□□□□ 0.33
RRP1B-201ENST00000340648 EIF4G3O43432 1585 aaKnown RBP17.09■□□□□ 0.33
RRP1B-201ENST00000340648 FLT4P35916 1363 aa17.09■□□□□ 0.33
RRP1B-201ENST00000340648 A0A1B0GVL5 298 aa17.09■□□□□ 0.33
RRP1B-201ENST00000340648 SLC27A2O14975 620 aa17.09■□□□□ 0.33
RRP1B-201ENST00000340648 RPS6KB1P23443 525 aa17.09■□□□□ 0.33
RRP1B-201ENST00000340648 SMARCC1Q92922 1105 aaPredicted RBP17.09■□□□□ 0.33
RRP1B-201ENST00000340648 TTC21AQ8NDW8 1320 aa17.08■□□□□ 0.33
RRP1B-201ENST00000340648 SHTN1A0MZ66 631 aa17.08■□□□□ 0.33
RRP1B-201ENST00000340648 YEATS4O95619 227 aa17.08■□□□□ 0.33
RRP1B-201ENST00000340648 SPA17Q15506 151 aa17.08■□□□□ 0.33
RRP1B-201ENST00000340648 MYO6Q9UM54 1294 aa17.08■□□□□ 0.33
RRP1B-201ENST00000340648 DHX37Q8IY37 1157 aaKnown RBP17.08■□□□□ 0.32
RRP1B-201ENST00000340648 PRDM15P57071 1507 aaPredicted RBP17.08■□□□□ 0.32
RRP1B-201ENST00000340648 SAMD1Q6SPF0 538 aaPredicted RBP17.08■□□□□ 0.32
RRP1B-201ENST00000340648 LEO1Q8WVC0 666 aaPredicted RBP17.08■□□□□ 0.32
RRP1B-201ENST00000340648 ERO1AQ96HE7 468 aa17.08■□□□□ 0.32
RRP1B-201ENST00000340648 CEP170Q5SW79 1584 aa17.08■□□□□ 0.32
RRP1B-201ENST00000340648 USP8P40818 1118 aa17.08■□□□□ 0.32
RRP1B-201ENST00000340648 SLC39A6Q13433 755 aa17.08■□□□□ 0.32
RRP1B-201ENST00000340648 HSP90AB3PQ58FF7 597 aa17.08■□□□□ 0.32
RRP1B-201ENST00000340648 BBXQ8WY36 941 aaPredicted RBP17.08■□□□□ 0.32
RRP1B-201ENST00000340648 AOX1Q06278 1338 aa17.07■□□□□ 0.32
RRP1B-201ENST00000340648 SSBP05455 408 aaKnown RBP eCLIP17.07■□□□□ 0.32
RRP1B-201ENST00000340648 LINS1Q8NG48 757 aa17.07■□□□□ 0.32
RRP1B-201ENST00000340648 MAP3K19Q56UN5 1328 aa17.07■□□□□ 0.32
RRP1B-201ENST00000340648 DNA2P51530 1060 aa17.07■□□□□ 0.32
RRP1B-201ENST00000340648 ELF2Q15723 593 aa17.07■□□□□ 0.32
RRP1B-201ENST00000340648 TCEAL9Q9UHQ7 104 aa17.07■□□□□ 0.32
RRP1B-201ENST00000340648 MAP3K5Q99683 1374 aa17.07■□□□□ 0.32
RRP1B-201ENST00000340648 KIF24Q5T7B8 1368 aa17.06■□□□□ 0.32
RRP1B-201ENST00000340648 LMBR1LQ6UX01 489 aa17.06■□□□□ 0.32
RRP1B-201ENST00000340648 CCDC191Q8NCU4 936 aa17.06■□□□□ 0.32
RRP1B-201ENST00000340648 SRRTQ9BXP5 876 aaKnown RBP17.06■□□□□ 0.32
RRP1B-201ENST00000340648 PRDM11Q9NQV5 511 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms