RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 IARSP41252 1262 aaKnown RBP17.09■□□□□ 0.33
SIRPB3P-201ENST00000340424 NEXNQ0ZGT2 675 aa17.09■□□□□ 0.33
SIRPB3P-201ENST00000340424 GRAPQ13588 217 aa17.09■□□□□ 0.33
SIRPB3P-201ENST00000340424 SF3B3Q15393 1217 aaKnown RBP17.09■□□□□ 0.33
SIRPB3P-201ENST00000340424 SYNE4Q8N205 404 aa17.09■□□□□ 0.33
SIRPB3P-201ENST00000340424 GRAPLQ8TC17 118 aaPredicted RBP17.09■□□□□ 0.33
SIRPB3P-201ENST00000340424 VPS33BQ9H267 617 aa17.09■□□□□ 0.33
SIRPB3P-201ENST00000340424 RRAGCQ9HB90 399 aa17.09■□□□□ 0.33
SIRPB3P-201ENST00000340424 ZNF277Q9NRM2 450 aaPredicted RBP17.09■□□□□ 0.33
SIRPB3P-201ENST00000340424 CWC25Q9NXE8 425 aaPredicted RBP17.09■□□□□ 0.33
SIRPB3P-201ENST00000340424 ZNF521Q96K83 1311 aa17.08■□□□□ 0.32
SIRPB3P-201ENST00000340424 PCCAP05165 728 aaPredicted RBP17.08■□□□□ 0.32
SIRPB3P-201ENST00000340424 FSTL1Q12841 308 aa17.08■□□□□ 0.32
SIRPB3P-201ENST00000340424 OLFM4Q6UX06 510 aa17.08■□□□□ 0.32
SIRPB3P-201ENST00000340424 MAP3K2Q9Y2U5 619 aa17.08■□□□□ 0.32
SIRPB3P-201ENST00000340424 PI4KAP2A4QPH2 592 aa17.07■□□□□ 0.32
SIRPB3P-201ENST00000340424 IRS4O14654 1257 aaPredicted RBP17.07■□□□□ 0.32
SIRPB3P-201ENST00000340424 VAMP4O75379 141 aa17.07■□□□□ 0.32
SIRPB3P-201ENST00000340424 HSPA6P17066 643 aa17.07■□□□□ 0.32
SIRPB3P-201ENST00000340424 EXOSC9Q06265 439 aaKnown RBP17.07■□□□□ 0.32
SIRPB3P-201ENST00000340424 SP8Q8IXZ3 490 aa17.07■□□□□ 0.32
SIRPB3P-201ENST00000340424 PI4KAP1Q8N8J0 262 aa17.07■□□□□ 0.32
SIRPB3P-201ENST00000340424 SUPT20HQ8NEM7 779 aa17.07■□□□□ 0.32
SIRPB3P-201ENST00000340424 JDP2Q8WYK2 163 aa17.07■□□□□ 0.32
SIRPB3P-201ENST00000340424 FLIIQ13045 1269 aa17.06■□□□□ 0.32
SIRPB3P-201ENST00000340424 CEP350Q5VT06 3117 aa17.05■□□□□ 0.32
SIRPB3P-201ENST00000340424 CDHR2Q9BYE9 1310 aa17.05■□□□□ 0.32
SIRPB3P-201ENST00000340424 IQCA1LA6NCM1 817 aa17.05■□□□□ 0.32
SIRPB3P-201ENST00000340424 L3MBTL3Q96JM7 780 aaPredicted RBP17.05■□□□□ 0.32
SIRPB3P-201ENST00000340424 RTFDC1Q9BY42 306 aaPredicted RBP17.05■□□□□ 0.32
SIRPB3P-201ENST00000340424 FZD9O00144 591 aa17.04■□□□□ 0.32
SIRPB3P-201ENST00000340424 SMC1BQ8NDV3 1235 aa17.04■□□□□ 0.32
SIRPB3P-201ENST00000340424 LRRC37AA6NMS7 1700 aa17.04■□□□□ 0.32
SIRPB3P-201ENST00000340424 SCN4AP35499 1836 aa17.03■□□□□ 0.32
SIRPB3P-201ENST00000340424 E9PSI1 815 aa17.03■□□□□ 0.32
SIRPB3P-201ENST00000340424 TCERG1O14776 1098 aaKnown RBP17.03■□□□□ 0.32
SIRPB3P-201ENST00000340424 PDE8AO60658 829 aa17.03■□□□□ 0.32
SIRPB3P-201ENST00000340424 IGKV5-2P06315 115 aa17.03■□□□□ 0.32
SIRPB3P-201ENST00000340424 FKBP5Q13451 457 aaPredicted RBP17.03■□□□□ 0.32
SIRPB3P-201ENST00000340424 CCDC152Q4G0S7 254 aa17.03■□□□□ 0.32
SIRPB3P-201ENST00000340424 RTL5Q5HYW3 569 aaPredicted RBP17.03■□□□□ 0.32
SIRPB3P-201ENST00000340424 DPP8Q6V1X1 898 aaPredicted RBP17.03■□□□□ 0.32
SIRPB3P-201ENST00000340424 DDNO94850 711 aaPredicted RBP17.02■□□□□ 0.32
SIRPB3P-201ENST00000340424 APLP1P51693 650 aa17.02■□□□□ 0.32
SIRPB3P-201ENST00000340424 EIF6P56537 245 aaKnown RBP17.02■□□□□ 0.32
SIRPB3P-201ENST00000340424 G2E3Q7L622 706 aa17.02■□□□□ 0.32
SIRPB3P-201ENST00000340424 GPC2Q8N158 579 aa17.02■□□□□ 0.32
SIRPB3P-201ENST00000340424 LARGE2Q8N3Y3 721 aa17.02■□□□□ 0.32
SIRPB3P-201ENST00000340424 MPNDQ8N594 471 aa17.02■□□□□ 0.32
SIRPB3P-201ENST00000340424 NEURL1BA8MQ27 555 aa17.01■□□□□ 0.31
SIRPB3P-201ENST00000340424 PPIP5K2O43314 1243 aa17.01■□□□□ 0.31
SIRPB3P-201ENST00000340424 NIM1KQ8IY84 436 aa17.01■□□□□ 0.31
SIRPB3P-201ENST00000340424 DNAAF4Q8WXU2 420 aa17.01■□□□□ 0.31
SIRPB3P-201ENST00000340424 ZNF428Q96B54 188 aa17.01■□□□□ 0.31
SIRPB3P-201ENST00000340424 ZNF541Q9H0D2 1346 aa17■□□□□ 0.31
SIRPB3P-201ENST00000340424 POTECB2RU33 542 aa17■□□□□ 0.31
SIRPB3P-201ENST00000340424 RPS8P62241 208 aaKnown RBP17■□□□□ 0.31
SIRPB3P-201ENST00000340424 LINS1Q8NG48 757 aa17■□□□□ 0.31
SIRPB3P-201ENST00000340424 CELF1Q92879 486 aaKnown RBP17■□□□□ 0.31
SIRPB3P-201ENST00000340424 KIAA2012Q0VF49 1180 aa16.99■□□□□ 0.31
SIRPB3P-201ENST00000340424 CWF19L2Q2TBE0 894 aaKnown RBP16.99■□□□□ 0.31
SIRPB3P-201ENST00000340424 RTL9Q8NET4 1388 aa16.99■□□□□ 0.31
SIRPB3P-201ENST00000340424 CTSWP56202 376 aa16.98■□□□□ 0.31
SIRPB3P-201ENST00000340424 GCKRQ14397 625 aa16.98■□□□□ 0.31
SIRPB3P-201ENST00000340424 MYH3P11055 1940 aa16.98■□□□□ 0.31
SIRPB3P-201ENST00000340424 COL4A5P29400 1685 aa16.97■□□□□ 0.31
SIRPB3P-201ENST00000340424 TAF1P21675 1872 aa16.97■□□□□ 0.31
SIRPB3P-201ENST00000340424 H7C1W4 665 aa16.97■□□□□ 0.31
SIRPB3P-201ENST00000340424 AOC3Q16853 763 aa16.97■□□□□ 0.31
SIRPB3P-201ENST00000340424 CDC5LQ99459 802 aaKnown RBP16.97■□□□□ 0.31
SIRPB3P-201ENST00000340424 PLA2G12BQ9BX93 195 aa16.97■□□□□ 0.31
SIRPB3P-201ENST00000340424 HACL1Q9UJ83 578 aa16.97■□□□□ 0.31
SIRPB3P-201ENST00000340424 ZNRF3Q9ULT6 936 aa16.97■□□□□ 0.31
SIRPB3P-201ENST00000340424 DUOX1Q9NRD9 1551 aa16.97■□□□□ 0.31
SIRPB3P-201ENST00000340424 SLFN5Q08AF3 891 aa16.96■□□□□ 0.31
SIRPB3P-201ENST00000340424 UBE3BQ7Z3V4 1068 aa16.96■□□□□ 0.31
SIRPB3P-201ENST00000340424 SLC51AQ86UW1 340 aa16.96■□□□□ 0.31
SIRPB3P-201ENST00000340424 PNMA8AQ86V59 439 aaPredicted RBP16.96■□□□□ 0.31
SIRPB3P-201ENST00000340424 EYA3Q99504 573 aa16.96■□□□□ 0.31
SIRPB3P-201ENST00000340424 TAF1DQ9H5J8 278 aaPredicted RBP16.96■□□□□ 0.31
SIRPB3P-201ENST00000340424 PODXL2Q9NZ53 605 aa16.96■□□□□ 0.31
SIRPB3P-201ENST00000340424 NSFL1CQ9UNZ2 370 aaKnown RBP16.96■□□□□ 0.31
SIRPB3P-201ENST00000340424 LTBP1Q14766 1721 aa16.96■□□□□ 0.3
SIRPB3P-201ENST00000340424 SPDYE4A6NLX3 237 aa16.95■□□□□ 0.3
SIRPB3P-201ENST00000340424 LMOD1P29536 600 aaPredicted RBP16.95■□□□□ 0.3
SIRPB3P-201ENST00000340424 CHADLQ6NUI6 762 aa16.95■□□□□ 0.3
SIRPB3P-201ENST00000340424 LDHDQ86WU2 507 aa16.95■□□□□ 0.3
SIRPB3P-201ENST00000340424 ANKRD18AQ8IVF6 992 aa16.95■□□□□ 0.3
SIRPB3P-201ENST00000340424 TTLL11Q8NHH1 800 aa16.95■□□□□ 0.3
SIRPB3P-201ENST00000340424 CT47B1P0C2W7 299 aaPredicted RBP16.94■□□□□ 0.3
SIRPB3P-201ENST00000340424 WASHC4Q2M389 1173 aa16.94■□□□□ 0.3
SIRPB3P-201ENST00000340424 SEC31BQ9NQW1 1179 aa16.94■□□□□ 0.3
SIRPB3P-201ENST00000340424 EPHX2P34913 555 aa16.93■□□□□ 0.3
SIRPB3P-201ENST00000340424 CASP7P55210 303 aa16.93■□□□□ 0.3
SIRPB3P-201ENST00000340424 GPSM2P81274 684 aa16.93■□□□□ 0.3
SIRPB3P-201ENST00000340424 TNIP1Q15025 636 aa16.93■□□□□ 0.3
SIRPB3P-201ENST00000340424 BEND3Q5T5X7 828 aa16.93■□□□□ 0.3
SIRPB3P-201ENST00000340424 JARID2Q92833 1246 aaPredicted RBP16.93■□□□□ 0.3
SIRPB3P-201ENST00000340424 GJA3Q9Y6H8 435 aa16.93■□□□□ 0.3
SIRPB3P-201ENST00000340424 COL4A1P02462 1669 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms