RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 FAM177BA6PVY3 158 aa25.97■■□□□ 1.75
VRK2-201ENST00000340157 EYA2O00167 538 aa25.97■■□□□ 1.75
VRK2-201ENST00000340157 PDE8AO60658 829 aa25.97■■□□□ 1.75
VRK2-201ENST00000340157 CCDC57Q2TAC2 916 aa25.97■■□□□ 1.75
VRK2-201ENST00000340157 TNNI3KQ59H18 835 aa25.97■■□□□ 1.75
VRK2-201ENST00000340157 GREM2Q9H772 168 aa25.97■■□□□ 1.75
VRK2-201ENST00000340157 SRP68Q9UHB9 627 aaKnown RBP25.97■■□□□ 1.75
VRK2-201ENST00000340157 FPGT-TNNI3KV9GXZ4 949 aa25.97■■□□□ 1.75
VRK2-201ENST00000340157 RGL2O15211 777 aa25.96■■□□□ 1.75
VRK2-201ENST00000340157 RTCBQ9Y3I0 505 aaKnown RBP25.96■■□□□ 1.75
VRK2-201ENST00000340157 CIAO1O76071 339 aa25.96■■□□□ 1.75
VRK2-201ENST00000340157 RXRBP28702 533 aa25.96■■□□□ 1.75
VRK2-201ENST00000340157 USPL1Q5W0Q7 1092 aa25.96■■□□□ 1.75
VRK2-201ENST00000340157 C22orf23Q9BZE7 217 aa25.96■■□□□ 1.75
VRK2-201ENST00000340157 TRIM6-TRIM34B2RNG4 842 aa25.95■■□□□ 1.74
VRK2-201ENST00000340157 GLRX3O76003 335 aaKnown RBP25.95■■□□□ 1.74
VRK2-201ENST00000340157 MAP4K4O95819 1239 aaPredicted RBP25.95■■□□□ 1.74
VRK2-201ENST00000340157 HCLS1P14317 486 aaPredicted RBP25.94■■□□□ 1.74
VRK2-201ENST00000340157 IL15P40933 162 aaPredicted RBP25.94■■□□□ 1.74
VRK2-201ENST00000340157 ARHGEF1Q92888 912 aaKnown RBP25.94■■□□□ 1.74
VRK2-201ENST00000340157 RILPL2Q969X0 211 aa25.94■■□□□ 1.74
VRK2-201ENST00000340157 DBNLQ9UJU6 430 aaKnown RBP25.94■■□□□ 1.74
VRK2-201ENST00000340157 LRP5O75197 1615 aa25.94■■□□□ 1.74
VRK2-201ENST00000340157 ITGA6P23229 1130 aa25.94■■□□□ 1.74
VRK2-201ENST00000340157 IFIT5Q13325 482 aaKnown RBP25.94■■□□□ 1.74
VRK2-201ENST00000340157 TBC1D9BQ66K14 1250 aa25.94■■□□□ 1.74
VRK2-201ENST00000340157 FBXO41Q8TF61 875 aa25.94■■□□□ 1.74
VRK2-201ENST00000340157 AK7Q96M32 723 aa25.93■■□□□ 1.74
VRK2-201ENST00000340157 GPATCH3Q96I76 525 aa25.92■■□□□ 1.74
VRK2-201ENST00000340157 ERC2O15083 957 aa25.91■■□□□ 1.74
VRK2-201ENST00000340157 SLC27A3Q5K4L6 730 aa25.91■■□□□ 1.74
VRK2-201ENST00000340157 PROM2Q8N271 834 aa25.91■■□□□ 1.74
VRK2-201ENST00000340157 ZNF609O15014 1411 aa25.91■■□□□ 1.74
VRK2-201ENST00000340157 CHMLP26374 656 aa25.91■■□□□ 1.74
VRK2-201ENST00000340157 RBM25P49756 843 aaKnown RBP25.91■■□□□ 1.74
VRK2-201ENST00000340157 POTEAQ6S8J7 498 aa25.91■■□□□ 1.74
VRK2-201ENST00000340157 FBXO3Q9UK99 471 aa25.91■■□□□ 1.74
VRK2-201ENST00000340157 RIC1Q4ADV7 1423 aa25.91■■□□□ 1.74
VRK2-201ENST00000340157 SPEF2Q9C093 1822 aa25.9■■□□□ 1.74
VRK2-201ENST00000340157 DBNDD2Q9BQY9 259 aa25.89■■□□□ 1.74
VRK2-201ENST00000340157 TNS1Q9HBL0 1735 aaKnown RBP25.89■■□□□ 1.74
VRK2-201ENST00000340157 GPR108Q9NPR9 543 aa25.89■■□□□ 1.74
VRK2-201ENST00000340157 PHF14O94880 888 aa25.89■■□□□ 1.73
VRK2-201ENST00000340157 CASC1Q6TDU7 716 aa25.89■■□□□ 1.73
VRK2-201ENST00000340157 COL4A1P02462 1669 aa25.89■■□□□ 1.73
VRK2-201ENST00000340157 ANKRD18BA2A2Z9 1011 aa25.88■■□□□ 1.73
VRK2-201ENST00000340157 ZPR1O75312 459 aa25.88■■□□□ 1.73
VRK2-201ENST00000340157 BICDL1Q6ZP65 573 aa25.88■■□□□ 1.73
VRK2-201ENST00000340157 DDRGK1Q96HY6 314 aa25.88■■□□□ 1.73
VRK2-201ENST00000340157 RIPOR2Q9Y4F9 1068 aa25.88■■□□□ 1.73
VRK2-201ENST00000340157 TAF7LQ5H9L4 462 aa25.87■■□□□ 1.73
VRK2-201ENST00000340157 TXNRD1Q16881 649 aa25.87■■□□□ 1.73
VRK2-201ENST00000340157 ERFEQ4G0M1 354 aa25.87■■□□□ 1.73
VRK2-201ENST00000340157 TRAPPC3LQ5T215 181 aa25.87■■□□□ 1.73
VRK2-201ENST00000340157 CNTROBQ8N137 903 aa25.87■■□□□ 1.73
VRK2-201ENST00000340157 ESYT1Q9BSJ8 1104 aa25.86■■□□□ 1.73
VRK2-201ENST00000340157 TIMM10P62072 90 aa25.85■■□□□ 1.73
VRK2-201ENST00000340157 IL25Q9H293 177 aa25.85■■□□□ 1.73
VRK2-201ENST00000340157 ABCC12Q96J65 1359 aa25.85■■□□□ 1.73
VRK2-201ENST00000340157 TAF1P21675 1872 aa25.85■■□□□ 1.73
VRK2-201ENST00000340157 RFC4P35249 363 aa25.85■■□□□ 1.73
VRK2-201ENST00000340157 USP26Q9BXU7 913 aa25.85■■□□□ 1.73
VRK2-201ENST00000340157 BOLA2Q9H3K6 86 aa25.85■■□□□ 1.73
VRK2-201ENST00000340157 RTL9Q8NET4 1388 aa25.85■■□□□ 1.73
VRK2-201ENST00000340157 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.84■■□□□ 1.73
VRK2-201ENST00000340157 ADRA2BP18089 450 aa25.84■■□□□ 1.73
VRK2-201ENST00000340157 ATP5JP18859 108 aa25.84■■□□□ 1.73
VRK2-201ENST00000340157 LDHAL6AQ6ZMR3 332 aa25.84■■□□□ 1.73
VRK2-201ENST00000340157 C3orf67Q6ZVT6 689 aa25.84■■□□□ 1.73
VRK2-201ENST00000340157 KIF2CQ99661 725 aa25.84■■□□□ 1.73
VRK2-201ENST00000340157 SEC31BQ9NQW1 1179 aa25.84■■□□□ 1.73
VRK2-201ENST00000340157 CEP126Q9P2H0 1117 aa25.84■■□□□ 1.73
VRK2-201ENST00000340157 A0A1B0GUL7 405 aa25.83■■□□□ 1.73
VRK2-201ENST00000340157 VGLL2Q8N8G2 317 aa25.83■■□□□ 1.72
VRK2-201ENST00000340157 SETDB2Q96T68 719 aa25.83■■□□□ 1.72
VRK2-201ENST00000340157 PLSCR1O15162 318 aa25.82■■□□□ 1.72
VRK2-201ENST00000340157 NEUROD6Q96NK8 337 aa25.82■■□□□ 1.72
VRK2-201ENST00000340157 EIF5BO60841 1220 aaKnown RBP25.81■■□□□ 1.72
VRK2-201ENST00000340157 EVI5LQ96CN4 794 aa25.81■■□□□ 1.72
VRK2-201ENST00000340157 HSP90B1P14625 803 aaKnown RBP25.81■■□□□ 1.72
VRK2-201ENST00000340157 CCDC152Q4G0S7 254 aa25.81■■□□□ 1.72
VRK2-201ENST00000340157 SLC10A5Q5PT55 438 aa25.81■■□□□ 1.72
VRK2-201ENST00000340157 REC8O95072 547 aa25.8■■□□□ 1.72
VRK2-201ENST00000340157 APBA3O96018 575 aa25.8■■□□□ 1.72
VRK2-201ENST00000340157 CNNM1Q9NRU3 951 aa25.8■■□□□ 1.72
VRK2-201ENST00000340157 A0A1B0GUL6 1792 aa25.8■■□□□ 1.72
VRK2-201ENST00000340157 RGPD3A6NKT7 1758 aaPredicted RBP25.8■■□□□ 1.72
VRK2-201ENST00000340157 RGPD4Q7Z3J3 1758 aa25.8■■□□□ 1.72
VRK2-201ENST00000340157 TNRC6CQ9HCJ0 1690 aaKnown RBP25.79■■□□□ 1.72
VRK2-201ENST00000340157 METTL24Q5JXM2 366 aa25.79■■□□□ 1.72
VRK2-201ENST00000340157 EDC3Q96F86 508 aaKnown RBP25.79■■□□□ 1.72
VRK2-201ENST00000340157 SSFA2P28290 1259 aa25.79■■□□□ 1.72
VRK2-201ENST00000340157 ADORA1P30542 326 aa25.79■■□□□ 1.72
VRK2-201ENST00000340157 SLC4A3P48751 1232 aa25.79■■□□□ 1.72
VRK2-201ENST00000340157 NDUFB9Q9Y6M9 179 aa25.79■■□□□ 1.72
VRK2-201ENST00000340157 ARAP2Q8WZ64 1704 aa25.78■■□□□ 1.72
VRK2-201ENST00000340157 NFIXQ14938 502 aa25.78■■□□□ 1.72
VRK2-201ENST00000340157 SF3B3Q15393 1217 aaKnown RBP25.78■■□□□ 1.72
VRK2-201ENST00000340157 NBPF5PQ86XG9 351 aaPredicted RBP25.78■■□□□ 1.72
VRK2-201ENST00000340157 NYXQ9GZU5 481 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms