RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 SRCIN1Q9C0H9 1055 aa19.34■□□□□ 0.69
UBE3B-201ENST00000340074 ALDH1L1O75891 902 aa19.33■□□□□ 0.68
UBE3B-201ENST00000340074 CCDC93Q567U6 631 aa19.33■□□□□ 0.68
UBE3B-201ENST00000340074 KIF16BQ96L93 1317 aa19.32■□□□□ 0.68
UBE3B-201ENST00000340074 LRRC37AA6NMS7 1700 aa19.32■□□□□ 0.68
UBE3B-201ENST00000340074 CTSWP56202 376 aa19.32■□□□□ 0.68
UBE3B-201ENST00000340074 GRAPQ13588 217 aa19.32■□□□□ 0.68
UBE3B-201ENST00000340074 SLC51AQ86UW1 340 aa19.32■□□□□ 0.68
UBE3B-201ENST00000340074 TIAM2Q8IVF5 1701 aa19.32■□□□□ 0.68
UBE3B-201ENST00000340074 GRAPLQ8TC17 118 aaPredicted RBP19.32■□□□□ 0.68
UBE3B-201ENST00000340074 CCDC85AQ96PX6 553 aaPredicted RBP19.32■□□□□ 0.68
UBE3B-201ENST00000340074 GRM8O00222 908 aa19.31■□□□□ 0.68
UBE3B-201ENST00000340074 PRELPP51888 382 aa19.31■□□□□ 0.68
UBE3B-201ENST00000340074 CCDC152Q4G0S7 254 aa19.31■□□□□ 0.68
UBE3B-201ENST00000340074 C9orf78Q9NZ63 289 aaPredicted RBP19.31■□□□□ 0.68
UBE3B-201ENST00000340074 BBOX1O75936 387 aa19.3■□□□□ 0.68
UBE3B-201ENST00000340074 C9orf131Q5VYM1 1079 aa19.3■□□□□ 0.68
UBE3B-201ENST00000340074 CELF1Q92879 486 aaKnown RBP19.3■□□□□ 0.68
UBE3B-201ENST00000340074 PLA2G12BQ9BX93 195 aa19.3■□□□□ 0.68
UBE3B-201ENST00000340074 TAOK3Q9H2K8 898 aa19.3■□□□□ 0.68
UBE3B-201ENST00000340074 SEC31BQ9NQW1 1179 aa19.3■□□□□ 0.68
UBE3B-201ENST00000340074 SNED1Q8TER0 1413 aa19.29■□□□□ 0.68
UBE3B-201ENST00000340074 LMNB1P20700 586 aa19.29■□□□□ 0.68
UBE3B-201ENST00000340074 RTKN2Q8IZC4 609 aa19.29■□□□□ 0.68
UBE3B-201ENST00000340074 TTLL11Q8NHH1 800 aa19.29■□□□□ 0.68
UBE3B-201ENST00000340074 API5Q9BZZ5 524 aaKnown RBP19.29■□□□□ 0.68
UBE3B-201ENST00000340074 RNF181Q9P0P0 153 aa19.29■□□□□ 0.68
UBE3B-201ENST00000340074 ATP6V0A2Q9Y487 856 aa19.29■□□□□ 0.68
UBE3B-201ENST00000340074 LTBP3Q9NS15 1303 aa19.29■□□□□ 0.68
UBE3B-201ENST00000340074 CC2D2BQ6DHV5 1058 aa19.28■□□□□ 0.68
UBE3B-201ENST00000340074 ARHGAP45Q92619 1136 aa19.28■□□□□ 0.68
UBE3B-201ENST00000340074 FRAT1Q92837 279 aaPredicted RBP19.28■□□□□ 0.68
UBE3B-201ENST00000340074 YTHDC1Q96MU7 727 aaKnown RBP19.28■□□□□ 0.68
UBE3B-201ENST00000340074 FKBP4Q02790 459 aaKnown RBP eCLIP19.27■□□□□ 0.68
UBE3B-201ENST00000340074 SP8Q8IXZ3 490 aa19.27■□□□□ 0.68
UBE3B-201ENST00000340074 GREM2Q9H772 168 aa19.27■□□□□ 0.68
UBE3B-201ENST00000340074 IPO8O15397 1037 aaKnown RBP19.26■□□□□ 0.67
UBE3B-201ENST00000340074 NBPF7P0C2Y1 421 aaPredicted RBP19.26■□□□□ 0.67
UBE3B-201ENST00000340074 TMX4Q9H1E5 349 aaPredicted RBP19.26■□□□□ 0.67
UBE3B-201ENST00000340074 CCT4P50991 539 aaKnown RBP19.25■□□□□ 0.67
UBE3B-201ENST00000340074 RPS8P62241 208 aaKnown RBP19.25■□□□□ 0.67
UBE3B-201ENST00000340074 FOXO4P98177 505 aa19.25■□□□□ 0.67
UBE3B-201ENST00000340074 TMC4Q7Z404 712 aa19.25■□□□□ 0.67
UBE3B-201ENST00000340074 UTYO14607 1347 aa19.25■□□□□ 0.67
UBE3B-201ENST00000340074 RTL9Q8NET4 1388 aa19.25■□□□□ 0.67
UBE3B-201ENST00000340074 CSF1RP07333 972 aa19.25■□□□□ 0.67
UBE3B-201ENST00000340074 TRIM27P14373 513 aa19.25■□□□□ 0.67
UBE3B-201ENST00000340074 GRIPAP1Q4V328 841 aa19.25■□□□□ 0.67
UBE3B-201ENST00000340074 EPHA10Q5JZY3 1008 aa19.25■□□□□ 0.67
UBE3B-201ENST00000340074 ATF7IPQ6VMQ6 1270 aa19.25■□□□□ 0.67
UBE3B-201ENST00000340074 PSMD1Q99460 953 aa19.25■□□□□ 0.67
UBE3B-201ENST00000340074 USP44Q9H0E7 712 aa19.25■□□□□ 0.67
UBE3B-201ENST00000340074 ZNF277Q9NRM2 450 aaPredicted RBP19.25■□□□□ 0.67
UBE3B-201ENST00000340074 TNNQ9UQP3 1299 aa19.25■□□□□ 0.67
UBE3B-201ENST00000340074 LTBP1Q14766 1721 aa19.24■□□□□ 0.67
UBE3B-201ENST00000340074 FAM161AQ3B820 660 aa19.24■□□□□ 0.67
UBE3B-201ENST00000340074 ZNF784Q8NCA9 323 aaPredicted RBP19.24■□□□□ 0.67
UBE3B-201ENST00000340074 SUCLG2Q96I99 432 aa19.24■□□□□ 0.67
UBE3B-201ENST00000340074 ZKSCAN2Q63HK3 967 aa19.23■□□□□ 0.67
UBE3B-201ENST00000340074 ANKRD18AQ8IVF6 992 aa19.23■□□□□ 0.67
UBE3B-201ENST00000340074 CDC5LQ99459 802 aaKnown RBP19.23■□□□□ 0.67
UBE3B-201ENST00000340074 DUOX1Q9NRD9 1551 aa19.22■□□□□ 0.67
UBE3B-201ENST00000340074 ITGA6P23229 1130 aa19.22■□□□□ 0.67
UBE3B-201ENST00000340074 MPNDQ8N594 471 aa19.22■□□□□ 0.67
UBE3B-201ENST00000340074 CLUAP1Q96AJ1 413 aa19.22■□□□□ 0.67
UBE3B-201ENST00000340074 KAZALD1Q96I82 304 aa19.22■□□□□ 0.67
UBE3B-201ENST00000340074 CHMP3Q9Y3E7 222 aa19.22■□□□□ 0.67
UBE3B-201ENST00000340074 A0A1B0GUL6 1792 aa19.21■□□□□ 0.67
UBE3B-201ENST00000340074 INTS3Q68E01 1043 aaKnown RBP19.21■□□□□ 0.67
UBE3B-201ENST00000340074 LMBR1LQ6UX01 489 aa19.21■□□□□ 0.67
UBE3B-201ENST00000340074 DPP8Q6V1X1 898 aaPredicted RBP19.21■□□□□ 0.67
UBE3B-201ENST00000340074 IARSP41252 1262 aaKnown RBP19.2■□□□□ 0.66
UBE3B-201ENST00000340074 ZNF526Q8TF50 670 aaPredicted RBP19.2■□□□□ 0.66
UBE3B-201ENST00000340074 NSFL1CQ9UNZ2 370 aaKnown RBP19.2■□□□□ 0.66
UBE3B-201ENST00000340074 COL4A5P29400 1685 aa19.19■□□□□ 0.66
UBE3B-201ENST00000340074 ANKRD18BA2A2Z9 1011 aa19.19■□□□□ 0.66
UBE3B-201ENST00000340074 GPSM2P81274 684 aa19.19■□□□□ 0.66
UBE3B-201ENST00000340074 RTFDC1Q9BY42 306 aaPredicted RBP19.19■□□□□ 0.66
UBE3B-201ENST00000340074 BICC1Q9H694 974 aaKnown RBP19.19■□□□□ 0.66
UBE3B-201ENST00000340074 RCAN3Q9UKA8 241 aa19.19■□□□□ 0.66
UBE3B-201ENST00000340074 ZC3H4Q9UPT8 1303 aaKnown RBP19.19■□□□□ 0.66
UBE3B-201ENST00000340074 IFIT5Q13325 482 aaKnown RBP19.18■□□□□ 0.66
UBE3B-201ENST00000340074 BSDC1Q9NW68 430 aaPredicted RBP19.18■□□□□ 0.66
UBE3B-201ENST00000340074 IGHMBP2P38935 993 aaKnown RBP19.17■□□□□ 0.66
UBE3B-201ENST00000340074 SUPT20HQ8NEM7 779 aa19.17■□□□□ 0.66
UBE3B-201ENST00000340074 UBTFL1P0CB47 393 aaPredicted RBP19.17■□□□□ 0.66
UBE3B-201ENST00000340074 CCDC57Q2TAC2 916 aa19.17■□□□□ 0.66
UBE3B-201ENST00000340074 RABL6Q3YEC7 729 aaPredicted RBP19.17■□□□□ 0.66
UBE3B-201ENST00000340074 TMEM57Q8N5G2 664 aa19.17■□□□□ 0.66
UBE3B-201ENST00000340074 ANKRD44Q8N8A2 993 aa19.17■□□□□ 0.66
UBE3B-201ENST00000340074 MPHOSPH8Q99549 860 aa19.17■□□□□ 0.66
UBE3B-201ENST00000340074 MEIS3Q99687 375 aa19.17■□□□□ 0.66
UBE3B-201ENST00000340074 ANKIB1Q9P2G1 1089 aa19.17■□□□□ 0.66
UBE3B-201ENST00000340074 PPIP5K2O43314 1243 aa19.16■□□□□ 0.66
UBE3B-201ENST00000340074 AOC3Q16853 763 aa19.16■□□□□ 0.66
UBE3B-201ENST00000340074 FTSJ3Q8IY81 847 aaKnown RBP19.16■□□□□ 0.66
UBE3B-201ENST00000340074 DZIP1LQ8IYY4 767 aaKnown RBP19.16■□□□□ 0.66
UBE3B-201ENST00000340074 LARGE2Q8N3Y3 721 aa19.16■□□□□ 0.66
UBE3B-201ENST00000340074 PODXL2Q9NZ53 605 aa19.16■□□□□ 0.66
UBE3B-201ENST00000340074 POLLQ9UGP5 575 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms