RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 RBM25P49756 843 aaKnown RBP17.17■□□□□ 0.34
RET-201ENST00000340058 RAB3GAP1Q15042 981 aa17.17■□□□□ 0.34
RET-201ENST00000340058 ZSCAN30Q86W11 494 aa17.17■□□□□ 0.34
RET-201ENST00000340058 F8W031 263 aaPredicted RBP17.16■□□□□ 0.34
RET-201ENST00000340058 HMGB1P09429 215 aaKnown RBP17.16■□□□□ 0.34
RET-201ENST00000340058 RFC4P35249 363 aa17.16■□□□□ 0.34
RET-201ENST00000340058 TXLNAP40222 546 aa17.16■□□□□ 0.34
RET-201ENST00000340058 IARSP41252 1262 aaKnown RBP17.16■□□□□ 0.34
RET-201ENST00000340058 PKP1Q13835 747 aa17.16■□□□□ 0.34
RET-201ENST00000340058 SOGA3Q5TF21 947 aa17.16■□□□□ 0.34
RET-201ENST00000340058 HMGN5P82970 282 aaKnown RBP17.15■□□□□ 0.34
RET-201ENST00000340058 CFAP100Q494V2 611 aa17.15■□□□□ 0.34
RET-201ENST00000340058 AK7Q96M32 723 aa17.15■□□□□ 0.34
RET-201ENST00000340058 TAF5LO75529 589 aa17.15■□□□□ 0.34
RET-201ENST00000340058 IQCA1Q86XH1 822 aa17.15■□□□□ 0.34
RET-201ENST00000340058 NCOA7Q8NI08 942 aa17.15■□□□□ 0.34
RET-201ENST00000340058 EAF2Q96CJ1 260 aaPredicted RBP17.15■□□□□ 0.34
RET-201ENST00000340058 KDM5AP29375 1690 aaKnown RBP17.15■□□□□ 0.34
RET-201ENST00000340058 SYT1P21579 422 aa17.15■□□□□ 0.34
RET-201ENST00000340058 METAP2P50579 478 aaKnown RBP eCLIP17.15■□□□□ 0.34
RET-201ENST00000340058 RPGRQ92834 1020 aaKnown RBP17.15■□□□□ 0.34
RET-201ENST00000340058 STX8Q9UNK0 236 aa17.15■□□□□ 0.34
RET-201ENST00000340058 CCDC171Q6TFL3 1326 aa17.15■□□□□ 0.34
RET-201ENST00000340058 ANAPC15P60006 121 aa17.15■□□□□ 0.34
RET-201ENST00000340058 ZKSCAN3Q9BRR0 538 aa17.15■□□□□ 0.34
RET-201ENST00000340058 NCOA5Q9HCD5 579 aaKnown RBP17.15■□□□□ 0.34
RET-201ENST00000340058 DACT1Q9NYF0 836 aa17.15■□□□□ 0.34
RET-201ENST00000340058 TTC41PQ6P2S7 1318 aa17.14■□□□□ 0.33
RET-201ENST00000340058 MARCKSP29966 332 aaPredicted RBP17.14■□□□□ 0.33
RET-201ENST00000340058 MFSD6Q6ZSS7 791 aa17.14■□□□□ 0.33
RET-201ENST00000340058 CTCFLQ8NI51 663 aaPredicted RBP17.14■□□□□ 0.33
RET-201ENST00000340058 CD2BP2O95400 341 aaKnown RBP17.14■□□□□ 0.33
RET-201ENST00000340058 KRT18P05783 430 aaKnown RBP17.14■□□□□ 0.33
RET-201ENST00000340058 TNNI3KQ59H18 835 aa17.14■□□□□ 0.33
RET-201ENST00000340058 FPGT-TNNI3KV9GXZ4 949 aa17.14■□□□□ 0.33
RET-201ENST00000340058 A0A0U1RQG5 324 aaPredicted RBP17.14■□□□□ 0.33
RET-201ENST00000340058 MCM5P33992 734 aa17.14■□□□□ 0.33
RET-201ENST00000340058 CCDC152Q4G0S7 254 aa17.14■□□□□ 0.33
RET-201ENST00000340058 TRMT1LQ7Z2T5 733 aaKnown RBP17.14■□□□□ 0.33
RET-201ENST00000340058 SEC62Q99442 399 aaKnown RBP17.14■□□□□ 0.33
RET-201ENST00000340058 SLC4A4Q9Y6R1 1079 aa17.14■□□□□ 0.33
RET-201ENST00000340058 SGSM2O43147 1006 aa17.13■□□□□ 0.33
RET-201ENST00000340058 ZNF165P49910 485 aa17.13■□□□□ 0.33
RET-201ENST00000340058 ANKRD18AQ8IVF6 992 aa17.13■□□□□ 0.33
RET-201ENST00000340058 PLBD2Q8NHP8 589 aa17.13■□□□□ 0.33
RET-201ENST00000340058 HMG20BQ9P0W2 317 aa17.13■□□□□ 0.33
RET-201ENST00000340058 TSPY2A6NKD2 308 aa17.13■□□□□ 0.33
RET-201ENST00000340058 OTUD7BQ6GQQ9 843 aa17.13■□□□□ 0.33
RET-201ENST00000340058 NOL7Q9UMY1 257 aaKnown RBP17.13■□□□□ 0.33
RET-201ENST00000340058 SNX14Q9Y5W7 946 aa17.13■□□□□ 0.33
RET-201ENST00000340058 EYA2O00167 538 aa17.12■□□□□ 0.33
RET-201ENST00000340058 PRC1O43663 620 aa17.12■□□□□ 0.33
RET-201ENST00000340058 ADCY5O95622 1261 aa17.12■□□□□ 0.33
RET-201ENST00000340058 KCNQ4P56696 695 aa17.12■□□□□ 0.33
RET-201ENST00000340058 UBE2HP62256 183 aa17.12■□□□□ 0.33
RET-201ENST00000340058 CCAR1Q8IX12 1150 aaKnown RBP17.12■□□□□ 0.33
RET-201ENST00000340058 SETDB2Q96T68 719 aa17.12■□□□□ 0.33
RET-201ENST00000340058 TRMT1Q9NXH9 659 aaKnown RBP17.12■□□□□ 0.33
RET-201ENST00000340058 MYOM2P54296 1465 aa17.12■□□□□ 0.33
RET-201ENST00000340058 PCDH11XQ9BZA7 1347 aa17.12■□□□□ 0.33
RET-201ENST00000340058 PCDH11YQ9BZA8 1340 aa17.12■□□□□ 0.33
RET-201ENST00000340058 OFD1O75665 1012 aa17.12■□□□□ 0.33
RET-201ENST00000340058 F13A1P00488 732 aa17.12■□□□□ 0.33
RET-201ENST00000340058 PRKCSHP14314 528 aaPredicted RBP17.12■□□□□ 0.33
RET-201ENST00000340058 ARHGEF25Q86VW2 580 aa17.12■□□□□ 0.33
RET-201ENST00000340058 TMEM94Q12767 1356 aa17.12■□□□□ 0.33
RET-201ENST00000340058 PHKG2P15735 406 aa17.12■□□□□ 0.33
RET-201ENST00000340058 ZNF444Q8N0Y2 327 aaPredicted RBP17.12■□□□□ 0.33
RET-201ENST00000340058 EFCAB6Q5THR3 1501 aa17.12■□□□□ 0.33
RET-201ENST00000340058 ITGA6P23229 1130 aa17.11■□□□□ 0.33
RET-201ENST00000340058 CEP89Q96ST8 783 aa17.11■□□□□ 0.33
RET-201ENST00000340058 BEND3Q5T5X7 828 aa17.11■□□□□ 0.33
RET-201ENST00000340058 MAGEB6Q8N7X4 407 aa17.11■□□□□ 0.33
RET-201ENST00000340058 NSFL1CQ9UNZ2 370 aaKnown RBP17.11■□□□□ 0.33
RET-201ENST00000340058 ABCC3O15438 1527 aa17.11■□□□□ 0.33
RET-201ENST00000340058 NEURL1BA8MQ27 555 aa17.11■□□□□ 0.33
RET-201ENST00000340058 FAM98CQ17RN3 349 aaKnown RBP17.11■□□□□ 0.33
RET-201ENST00000340058 NLRP3Q96P20 1036 aa17.11■□□□□ 0.33
RET-201ENST00000340058 UTP14AQ9BVJ6 771 aaKnown RBP17.11■□□□□ 0.33
RET-201ENST00000340058 SSRP1Q08945 709 aaKnown RBP17.11■□□□□ 0.33
RET-201ENST00000340058 RNF113AO15541 343 aaKnown RBP17.1■□□□□ 0.33
RET-201ENST00000340058 CLTCL1P53675 1640 aa17.1■□□□□ 0.33
RET-201ENST00000340058 ARHGEF10O15013 1369 aa17.1■□□□□ 0.33
RET-201ENST00000340058 IGSF1Q8N6C5 1336 aa17.1■□□□□ 0.33
RET-201ENST00000340058 ZNF853P0CG23 659 aa17.1■□□□□ 0.33
RET-201ENST00000340058 FILIP1LQ4L180 1135 aa17.1■□□□□ 0.33
RET-201ENST00000340058 PTH1RQ03431 593 aa17.1■□□□□ 0.33
RET-201ENST00000340058 TTF1Q15361 905 aaPredicted RBP17.1■□□□□ 0.33
RET-201ENST00000340058 FAM182BQ5T319 152 aa17.1■□□□□ 0.33
RET-201ENST00000340058 SSH3Q8TE77 659 aa17.1■□□□□ 0.33
RET-201ENST00000340058 ALG1Q9BT22 464 aa17.1■□□□□ 0.33
RET-201ENST00000340058 USP6P35125 1406 aa17.09■□□□□ 0.33
RET-201ENST00000340058 ZBTB43O43298 467 aa17.09■□□□□ 0.33
RET-201ENST00000340058 TOM1O60784 492 aa17.09■□□□□ 0.33
RET-201ENST00000340058 NLRP5P59047 1200 aa17.09■□□□□ 0.33
RET-201ENST00000340058 CPLX3Q8WVH0 158 aa17.09■□□□□ 0.33
RET-201ENST00000340058 ZNF622Q969S3 477 aaKnown RBP eCLIP17.09■□□□□ 0.33
RET-201ENST00000340058 KIAA0232Q92628 1395 aa17.09■□□□□ 0.33
RET-201ENST00000340058 CRACR2BQ8N4Y2 399 aaPredicted RBP17.09■□□□□ 0.33
RET-201ENST00000340058 UQCRHLA0A096LP55 91 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms