RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 ZBTB47Q9UFB7 747 aaPredicted RBP18.03■□□□□ 0.48
NIPAL3-202ENST00000339255 CHMP3Q9Y3E7 222 aa18.03■□□□□ 0.48
NIPAL3-202ENST00000339255 RAB11FIP3O75154 756 aa18.02■□□□□ 0.47
NIPAL3-202ENST00000339255 DDR1Q08345 913 aa18.02■□□□□ 0.47
NIPAL3-202ENST00000339255 IFIT5Q13325 482 aaKnown RBP18.02■□□□□ 0.47
NIPAL3-202ENST00000339255 ERC1Q8IUD2 1116 aa18.02■□□□□ 0.47
NIPAL3-202ENST00000339255 SURF6O75683 361 aaKnown RBP18.01■□□□□ 0.47
NIPAL3-202ENST00000339255 NUCB1Q02818 461 aa18.01■□□□□ 0.47
NIPAL3-202ENST00000339255 FBXO3Q9UK99 471 aa18.01■□□□□ 0.47
NIPAL3-202ENST00000339255 PARP3Q9Y6F1 533 aa18.01■□□□□ 0.47
NIPAL3-202ENST00000339255 TNRC6CQ9HCJ0 1690 aaKnown RBP18.01■□□□□ 0.47
NIPAL3-202ENST00000339255 LRP5O75197 1615 aa18.01■□□□□ 0.47
NIPAL3-202ENST00000339255 MMP10P09238 476 aa18■□□□□ 0.47
NIPAL3-202ENST00000339255 RFX5P48382 616 aaPredicted RBP18■□□□□ 0.47
NIPAL3-202ENST00000339255 SF3B3Q15393 1217 aaKnown RBP18■□□□□ 0.47
NIPAL3-202ENST00000339255 FAM161AQ3B820 660 aa18■□□□□ 0.47
NIPAL3-202ENST00000339255 PRR5LQ6MZQ0 368 aa18■□□□□ 0.47
NIPAL3-202ENST00000339255 NLRP3Q96P20 1036 aa18■□□□□ 0.47
NIPAL3-202ENST00000339255 EXOC6BQ9Y2D4 811 aa17.99■□□□□ 0.47
NIPAL3-202ENST00000339255 ANKRD31Q8N7Z5 1873 aa17.99■□□□□ 0.47
NIPAL3-202ENST00000339255 ANKRD18BA2A2Z9 1011 aa17.99■□□□□ 0.47
NIPAL3-202ENST00000339255 ITGA6P23229 1130 aa17.99■□□□□ 0.47
NIPAL3-202ENST00000339255 PTPN12Q05209 780 aaKnown RBP17.99■□□□□ 0.47
NIPAL3-202ENST00000339255 OS9Q13438 667 aaPredicted RBP17.99■□□□□ 0.47
NIPAL3-202ENST00000339255 ILDR2Q71H61 639 aa17.99■□□□□ 0.47
NIPAL3-202ENST00000339255 LRRCC1Q9C099 1032 aa17.99■□□□□ 0.47
NIPAL3-202ENST00000339255 GREM2Q9H772 168 aa17.99■□□□□ 0.47
NIPAL3-202ENST00000339255 SPEF2Q9C093 1822 aa17.98■□□□□ 0.47
NIPAL3-202ENST00000339255 G3BP1Q13283 466 aaKnown RBP eCLIP17.98■□□□□ 0.47
NIPAL3-202ENST00000339255 TAF7LQ5H9L4 462 aa17.98■□□□□ 0.47
NIPAL3-202ENST00000339255 CHD1LQ86WJ1 897 aa17.98■□□□□ 0.47
NIPAL3-202ENST00000339255 KIF1BPQ96EK5 621 aa17.98■□□□□ 0.47
NIPAL3-202ENST00000339255 CIAO1O76071 339 aa17.97■□□□□ 0.47
NIPAL3-202ENST00000339255 ANKRD45Q5TZF3 282 aa17.97■□□□□ 0.47
NIPAL3-202ENST00000339255 MSL1Q68DK7 614 aa17.97■□□□□ 0.47
NIPAL3-202ENST00000339255 PDZRN3Q9UPQ7 1066 aa17.97■□□□□ 0.47
NIPAL3-202ENST00000339255 CDC5LQ99459 802 aaKnown RBP17.96■□□□□ 0.47
NIPAL3-202ENST00000339255 PA2G4Q9UQ80 394 aaKnown RBP17.96■□□□□ 0.47
NIPAL3-202ENST00000339255 BRIP1Q9BX63 1249 aa17.96■□□□□ 0.47
NIPAL3-202ENST00000339255 CRY2Q49AN0 593 aa17.95■□□□□ 0.46
NIPAL3-202ENST00000339255 KLHDC4Q8TBB5 520 aa17.95■□□□□ 0.46
NIPAL3-202ENST00000339255 RHPN1Q8TCX5 695 aa17.95■□□□□ 0.46
NIPAL3-202ENST00000339255 CCDC85AQ96PX6 553 aaPredicted RBP17.95■□□□□ 0.46
NIPAL3-202ENST00000339255 SIL1Q9H173 461 aa17.95■□□□□ 0.46
NIPAL3-202ENST00000339255 EYA2O00167 538 aa17.94■□□□□ 0.46
NIPAL3-202ENST00000339255 IL15P40933 162 aaPredicted RBP17.94■□□□□ 0.46
NIPAL3-202ENST00000339255 LNPKQ9C0E8 428 aa17.94■□□□□ 0.46
NIPAL3-202ENST00000339255 PDGFDQ9GZP0 370 aaPredicted RBP17.94■□□□□ 0.46
NIPAL3-202ENST00000339255 MTFR1LQ9H019 292 aa17.94■□□□□ 0.46
NIPAL3-202ENST00000339255 TAF1P21675 1872 aa17.94■□□□□ 0.46
NIPAL3-202ENST00000339255 KLRG2A4D1S0 409 aaPredicted RBP17.93■□□□□ 0.46
NIPAL3-202ENST00000339255 APBB1O00213 710 aa17.93■□□□□ 0.46
NIPAL3-202ENST00000339255 R3HDM1Q15032 1099 aaKnown RBP17.93■□□□□ 0.46
NIPAL3-202ENST00000339255 C3orf67Q6ZVT6 689 aa17.93■□□□□ 0.46
NIPAL3-202ENST00000339255 KIF13BQ9NQT8 1826 aa17.93■□□□□ 0.46
NIPAL3-202ENST00000339255 PDE6BP35913 854 aa17.93■□□□□ 0.46
NIPAL3-202ENST00000339255 LDHAL6AQ6ZMR3 332 aa17.93■□□□□ 0.46
NIPAL3-202ENST00000339255 PELP1Q8IZL8 1130 aaKnown RBP17.93■□□□□ 0.46
NIPAL3-202ENST00000339255 IGHMBP2P38935 993 aaKnown RBP17.92■□□□□ 0.46
NIPAL3-202ENST00000339255 DDX46Q7L014 1031 aaKnown RBP17.92■□□□□ 0.46
NIPAL3-202ENST00000339255 CCDC24Q8N4L8 307 aa17.92■□□□□ 0.46
NIPAL3-202ENST00000339255 RPGRQ92834 1020 aaKnown RBP17.92■□□□□ 0.46
NIPAL3-202ENST00000339255 ZNF594Q96JF6 807 aaPredicted RBP17.92■□□□□ 0.46
NIPAL3-202ENST00000339255 MPHOSPH8Q99549 860 aa17.92■□□□□ 0.46
NIPAL3-202ENST00000339255 A0A1B0GUL6 1792 aa17.92■□□□□ 0.46
NIPAL3-202ENST00000339255 COL11A2P13942 1736 aaPredicted RBP17.91■□□□□ 0.46
NIPAL3-202ENST00000339255 ATG9AQ7Z3C6 839 aa17.91■□□□□ 0.46
NIPAL3-202ENST00000339255 ANKRD18AQ8IVF6 992 aa17.91■□□□□ 0.46
NIPAL3-202ENST00000339255 CLASRPQ8N2M8 674 aaKnown RBP17.91■□□□□ 0.46
NIPAL3-202ENST00000339255 CNNM1Q9NRU3 951 aa17.91■□□□□ 0.46
NIPAL3-202ENST00000339255 SASH1O94885 1247 aa17.9■□□□□ 0.46
NIPAL3-202ENST00000339255 SEC31BQ9NQW1 1179 aa17.9■□□□□ 0.46
NIPAL3-202ENST00000339255 MROH5Q6ZUA9 1318 aa17.9■□□□□ 0.46
NIPAL3-202ENST00000339255 C10orf71Q711Q0 1435 aa17.9■□□□□ 0.46
NIPAL3-202ENST00000339255 DLEC1Q9Y238 1755 aa17.9■□□□□ 0.46
NIPAL3-202ENST00000339255 POLD1P28340 1107 aa17.9■□□□□ 0.46
NIPAL3-202ENST00000339255 HOXA10P31260 410 aaPredicted RBP17.9■□□□□ 0.46
NIPAL3-202ENST00000339255 GPR108Q9NPR9 543 aa17.9■□□□□ 0.46
NIPAL3-202ENST00000339255 RIPOR2Q9Y4F9 1068 aa17.9■□□□□ 0.46
NIPAL3-202ENST00000339255 SMARCA5O60264 1052 aaPredicted RBP17.89■□□□□ 0.45
NIPAL3-202ENST00000339255 LRRC24Q50LG9 513 aa17.89■□□□□ 0.45
NIPAL3-202ENST00000339255 RBM17Q96I25 401 aaKnown RBP17.89■□□□□ 0.45
NIPAL3-202ENST00000339255 BSDC1Q9NW68 430 aaPredicted RBP17.89■□□□□ 0.45
NIPAL3-202ENST00000339255 CEP126Q9P2H0 1117 aa17.89■□□□□ 0.45
NIPAL3-202ENST00000339255 RPS8P62241 208 aaKnown RBP17.88■□□□□ 0.45
NIPAL3-202ENST00000339255 IL1RAPL2Q9NP60 686 aa17.88■□□□□ 0.45
NIPAL3-202ENST00000339255 ARAP2Q8WZ64 1704 aa17.87■□□□□ 0.45
NIPAL3-202ENST00000339255 ZBTB7AO95365 584 aa17.87■□□□□ 0.45
NIPAL3-202ENST00000339255 PDE4AP27815 886 aa17.87■□□□□ 0.45
NIPAL3-202ENST00000339255 RGS3P49796 1198 aa17.87■□□□□ 0.45
NIPAL3-202ENST00000339255 GRAPQ13588 217 aa17.87■□□□□ 0.45
NIPAL3-202ENST00000339255 GRAPLQ8TC17 118 aaPredicted RBP17.87■□□□□ 0.45
NIPAL3-202ENST00000339255 CRAMP1Q96RY5 1269 aa17.87■□□□□ 0.45
NIPAL3-202ENST00000339255 PUS3Q9BZE2 481 aaKnown RBP17.87■□□□□ 0.45
NIPAL3-202ENST00000339255 AKAP2Q9Y2D5 859 aa17.87■□□□□ 0.45
NIPAL3-202ENST00000339255 COL4A1P02462 1669 aa17.87■□□□□ 0.45
NIPAL3-202ENST00000339255 LRRC37AA6NMS7 1700 aa17.87■□□□□ 0.45
NIPAL3-202ENST00000339255 NPR1P16066 1061 aa17.87■□□□□ 0.45
NIPAL3-202ENST00000339255 TFCP2Q12800 502 aa17.87■□□□□ 0.45
NIPAL3-202ENST00000339255 METTL24Q5JXM2 366 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms