RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 BBOX1O75936 387 aa20.44■□□□□ 0.86
LINC01116-202ENST00000339037 HCLS1P14317 486 aaPredicted RBP20.44■□□□□ 0.86
LINC01116-202ENST00000339037 RTFDC1Q9BY42 306 aaPredicted RBP20.44■□□□□ 0.86
LINC01116-202ENST00000339037 GPRC5DQ9NZD1 345 aa20.44■□□□□ 0.86
LINC01116-202ENST00000339037 TRMT112Q9UI30 125 aaKnown RBP20.44■□□□□ 0.86
LINC01116-202ENST00000339037 ZNRF3Q9ULT6 936 aa20.44■□□□□ 0.86
LINC01116-202ENST00000339037 MAP2K1Q02750 393 aaPredicted RBP20.43■□□□□ 0.86
LINC01116-202ENST00000339037 NEUROD2Q15784 382 aa20.43■□□□□ 0.86
LINC01116-202ENST00000339037 ADARB2Q9NS39 739 aaKnown RBP20.43■□□□□ 0.86
LINC01116-202ENST00000339037 SH3TC1Q8TE82 1336 aa20.43■□□□□ 0.86
LINC01116-202ENST00000339037 LBX1P52954 281 aa20.42■□□□□ 0.86
LINC01116-202ENST00000339037 FMR1Q06787 632 aaKnown RBP eCLIP20.42■□□□□ 0.86
LINC01116-202ENST00000339037 CXCL9Q07325 125 aa20.42■□□□□ 0.86
LINC01116-202ENST00000339037 TCIRG1Q13488 830 aa20.42■□□□□ 0.86
LINC01116-202ENST00000339037 DDX46Q7L014 1031 aaKnown RBP20.42■□□□□ 0.86
LINC01116-202ENST00000339037 SP8Q8IXZ3 490 aa20.42■□□□□ 0.86
LINC01116-202ENST00000339037 MPNDQ8N594 471 aa20.42■□□□□ 0.86
LINC01116-202ENST00000339037 ZBTB12Q9Y330 459 aaPredicted RBP20.42■□□□□ 0.86
LINC01116-202ENST00000339037 ANKRD36CQ5JPF3 1778 aa20.41■□□□□ 0.86
LINC01116-202ENST00000339037 TRAF5O00463 557 aa20.41■□□□□ 0.86
LINC01116-202ENST00000339037 KRT24Q2M2I5 525 aa20.41■□□□□ 0.86
LINC01116-202ENST00000339037 PAXIP1Q6ZW49 1069 aaPredicted RBP20.41■□□□□ 0.86
LINC01116-202ENST00000339037 CCDC146Q8IYE0 955 aa20.41■□□□□ 0.86
LINC01116-202ENST00000339037 CHL1O00533 1208 aa20.4■□□□□ 0.86
LINC01116-202ENST00000339037 GMPSP49915 693 aaPredicted RBP20.4■□□□□ 0.86
LINC01116-202ENST00000339037 KIAA2012Q0VF49 1180 aa20.4■□□□□ 0.86
LINC01116-202ENST00000339037 GRAPQ13588 217 aa20.4■□□□□ 0.86
LINC01116-202ENST00000339037 GRAPLQ8TC17 118 aaPredicted RBP20.4■□□□□ 0.86
LINC01116-202ENST00000339037 CHPF2Q9P2E5 772 aa20.4■□□□□ 0.86
LINC01116-202ENST00000339037 LAS1LQ9Y4W2 734 aaKnown RBP20.4■□□□□ 0.86
LINC01116-202ENST00000339037 MYBBP1AQ9BQG0 1328 aaKnown RBP20.39■□□□□ 0.85
LINC01116-202ENST00000339037 CDHR2Q9BYE9 1310 aa20.39■□□□□ 0.85
LINC01116-202ENST00000339037 ECE1P42892 770 aa20.39■□□□□ 0.85
LINC01116-202ENST00000339037 HDGFL1Q5TGJ6 251 aa20.39■□□□□ 0.85
LINC01116-202ENST00000339037 CST9Q5W186 159 aa20.39■□□□□ 0.85
LINC01116-202ENST00000339037 CIAPIN1Q6FI81 312 aa20.39■□□□□ 0.85
LINC01116-202ENST00000339037 CAPNS2Q96L46 248 aa20.39■□□□□ 0.85
LINC01116-202ENST00000339037 HSPA8P11142 646 aaKnown RBP20.38■□□□□ 0.85
LINC01116-202ENST00000339037 GRM1Q13255 1194 aa20.38■□□□□ 0.85
LINC01116-202ENST00000339037 TMC4Q7Z404 712 aa20.38■□□□□ 0.85
LINC01116-202ENST00000339037 LAMB2P55268 1798 aa20.38■□□□□ 0.85
LINC01116-202ENST00000339037 RAD17O75943 681 aa20.37■□□□□ 0.85
LINC01116-202ENST00000339037 TNIP1Q15025 636 aa20.37■□□□□ 0.85
LINC01116-202ENST00000339037 WDR43Q15061 677 aaKnown RBP eCLIP20.37■□□□□ 0.85
LINC01116-202ENST00000339037 CYP4F22Q6NT55 531 aa20.37■□□□□ 0.85
LINC01116-202ENST00000339037 ZNF428Q96B54 188 aa20.37■□□□□ 0.85
LINC01116-202ENST00000339037 RUNDC1Q96C34 613 aa20.37■□□□□ 0.85
LINC01116-202ENST00000339037 BCL2L13Q9BXK5 485 aa20.37■□□□□ 0.85
LINC01116-202ENST00000339037 RTN4Q9NQC3 1192 aaKnown RBP20.37■□□□□ 0.85
LINC01116-202ENST00000339037 TRIM35Q9UPQ4 493 aa20.37■□□□□ 0.85
LINC01116-202ENST00000339037 HOXB7P09629 217 aa20.36■□□□□ 0.85
LINC01116-202ENST00000339037 PLBD2Q8NHP8 589 aa20.36■□□□□ 0.85
LINC01116-202ENST00000339037 GPR101Q96P66 508 aaPredicted RBP20.36■□□□□ 0.85
LINC01116-202ENST00000339037 BEGAINQ9BUH8 593 aa20.36■□□□□ 0.85
LINC01116-202ENST00000339037 DBF4Q9UBU7 674 aaPredicted RBP20.36■□□□□ 0.85
LINC01116-202ENST00000339037 TLL2Q9Y6L7 1015 aa20.36■□□□□ 0.85
LINC01116-202ENST00000339037 THSD7BQ9C0I4 1608 aa20.35■□□□□ 0.85
LINC01116-202ENST00000339037 ANKRD13DQ6ZTN6 518 aa20.35■□□□□ 0.85
LINC01116-202ENST00000339037 CELF2O95319 508 aaKnown RBP20.34■□□□□ 0.85
LINC01116-202ENST00000339037 DDX10Q13206 875 aaKnown RBP20.34■□□□□ 0.85
LINC01116-202ENST00000339037 ZC3H15Q8WU90 426 aaKnown RBP20.34■□□□□ 0.85
LINC01116-202ENST00000339037 FAM89AQ96GI7 184 aa20.34■□□□□ 0.85
LINC01116-202ENST00000339037 TRPM7Q96QT4 1865 aa20.34■□□□□ 0.85
LINC01116-202ENST00000339037 DUOX1Q9NRD9 1551 aa20.34■□□□□ 0.85
LINC01116-202ENST00000339037 SAPCD2Q86UD0 394 aa20.33■□□□□ 0.85
LINC01116-202ENST00000339037 ISCA1Q9BUE6 129 aa20.33■□□□□ 0.85
LINC01116-202ENST00000339037 GLIS2Q9BZE0 524 aaPredicted RBP20.33■□□□□ 0.85
LINC01116-202ENST00000339037 PGAP2Q9UHJ9 254 aa20.33■□□□□ 0.85
LINC01116-202ENST00000339037 LRRC37AA6NMS7 1700 aa20.33■□□□□ 0.84
LINC01116-202ENST00000339037 YDJCA8MPS7 323 aa20.32■□□□□ 0.84
LINC01116-202ENST00000339037 ATP5J2-PTCD1G3V325 749 aa20.32■□□□□ 0.84
LINC01116-202ENST00000339037 TRPM4Q8TD43 1214 aa20.32■□□□□ 0.84
LINC01116-202ENST00000339037 HYPKQ9NX55 129 aa20.32■□□□□ 0.84
LINC01116-202ENST00000339037 NSFL1CQ9UNZ2 370 aaKnown RBP20.32■□□□□ 0.84
LINC01116-202ENST00000339037 MAP2K2P36507 400 aa20.31■□□□□ 0.84
LINC01116-202ENST00000339037 HIRAP54198 1017 aaPredicted RBP20.31■□□□□ 0.84
LINC01116-202ENST00000339037 SF3B3Q15393 1217 aaKnown RBP20.31■□□□□ 0.84
LINC01116-202ENST00000339037 WASHC4Q2M389 1173 aa20.31■□□□□ 0.84
LINC01116-202ENST00000339037 CELF1Q92879 486 aaKnown RBP20.31■□□□□ 0.84
LINC01116-202ENST00000339037 CFAP44Q96MT7 982 aa20.31■□□□□ 0.84
LINC01116-202ENST00000339037 CNOT7Q9UIV1 285 aaKnown RBP20.31■□□□□ 0.84
LINC01116-202ENST00000339037 ADAMTS8Q9UP79 889 aa20.31■□□□□ 0.84
LINC01116-202ENST00000339037 TAF1P21675 1872 aa20.3■□□□□ 0.84
LINC01116-202ENST00000339037 DDX60Q8IY21 1712 aaKnown RBP20.3■□□□□ 0.84
LINC01116-202ENST00000339037 H7C1D1 291 aa20.3■□□□□ 0.84
LINC01116-202ENST00000339037 AOC2O75106 756 aa20.3■□□□□ 0.84
LINC01116-202ENST00000339037 RTL5Q5HYW3 569 aaPredicted RBP20.3■□□□□ 0.84
LINC01116-202ENST00000339037 DUSP27Q5VZP5 1158 aa20.3■□□□□ 0.84
LINC01116-202ENST00000339037 CDC37L1Q7L3B6 337 aa20.3■□□□□ 0.84
LINC01116-202ENST00000339037 MICALL2Q8IY33 904 aa20.3■□□□□ 0.84
LINC01116-202ENST00000339037 ZNF408Q9H9D4 720 aa20.3■□□□□ 0.84
LINC01116-202ENST00000339037 ABHD8Q96I13 439 aa20.29■□□□□ 0.84
LINC01116-202ENST00000339037 HHIPL1Q96JK4 782 aa20.29■□□□□ 0.84
LINC01116-202ENST00000339037 SHTN1A0MZ66 631 aa20.28■□□□□ 0.84
LINC01116-202ENST00000339037 C6orf229H3BNL8 230 aa20.28■□□□□ 0.84
LINC01116-202ENST00000339037 IRS4O14654 1257 aaPredicted RBP20.28■□□□□ 0.84
LINC01116-202ENST00000339037 TRIM28Q13263 835 aaKnown RBP20.28■□□□□ 0.84
LINC01116-202ENST00000339037 DPF2Q92785 391 aa20.28■□□□□ 0.84
LINC01116-202ENST00000339037 DBNDD1Q9H9R9 158 aa20.28■□□□□ 0.84
LINC01116-202ENST00000339037 MBIPQ9NS73 344 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms