RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 BTAF1O14981 1849 aa19.74■□□□□ 0.75
HPS1-202ENST00000338546 IRS4O14654 1257 aaPredicted RBP19.74■□□□□ 0.75
HPS1-202ENST00000338546 DBNLQ9UJU6 430 aaKnown RBP19.74■□□□□ 0.75
HPS1-202ENST00000338546 RFX7Q2KHR2 1363 aa19.73■□□□□ 0.75
HPS1-202ENST00000338546 CTSWP56202 376 aa19.73■□□□□ 0.75
HPS1-202ENST00000338546 TTLL11Q8NHH1 800 aa19.73■□□□□ 0.75
HPS1-202ENST00000338546 AKAP2Q9Y2D5 859 aa19.73■□□□□ 0.75
HPS1-202ENST00000338546 UBN2Q6ZU65 1347 aa19.72■□□□□ 0.75
HPS1-202ENST00000338546 UTP14AQ9BVJ6 771 aaKnown RBP19.72■□□□□ 0.75
HPS1-202ENST00000338546 DIAPH3Q9NSV4 1193 aa19.72■□□□□ 0.75
HPS1-202ENST00000338546 TLR7Q9NYK1 1049 aaKnown RBP19.72■□□□□ 0.75
HPS1-202ENST00000338546 CEP126Q9P2H0 1117 aa19.72■□□□□ 0.75
HPS1-202ENST00000338546 SH3TC1Q8TE82 1336 aa19.72■□□□□ 0.75
HPS1-202ENST00000338546 RAD50Q92878 1312 aa19.72■□□□□ 0.75
HPS1-202ENST00000338546 BCORQ6W2J9 1755 aa19.71■□□□□ 0.75
HPS1-202ENST00000338546 MAP4K4O95819 1239 aaPredicted RBP19.71■□□□□ 0.75
HPS1-202ENST00000338546 LINC00116Q8NCU8 138 aa19.71■□□□□ 0.75
HPS1-202ENST00000338546 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.71■□□□□ 0.75
HPS1-202ENST00000338546 ANO2Q9NQ90 1003 aa19.71■□□□□ 0.75
HPS1-202ENST00000338546 SNRKQ9NRH2 765 aa19.71■□□□□ 0.75
HPS1-202ENST00000338546 ANKRD18BA2A2Z9 1011 aa19.7■□□□□ 0.74
HPS1-202ENST00000338546 TAF7LQ5H9L4 462 aa19.7■□□□□ 0.74
HPS1-202ENST00000338546 KIAA1211Q6ZU35 1233 aa19.7■□□□□ 0.74
HPS1-202ENST00000338546 SEPT12Q8IYM1 358 aa19.7■□□□□ 0.74
HPS1-202ENST00000338546 HAUS7Q99871 368 aa19.7■□□□□ 0.74
HPS1-202ENST00000338546 ANTXR1Q9H6X2 564 aa19.7■□□□□ 0.74
HPS1-202ENST00000338546 ZNF609O15014 1411 aa19.69■□□□□ 0.74
HPS1-202ENST00000338546 SBF2Q86WG5 1849 aa19.69■□□□□ 0.74
HPS1-202ENST00000338546 ST18O60284 1047 aa19.69■□□□□ 0.74
HPS1-202ENST00000338546 LRRC24Q50LG9 513 aa19.69■□□□□ 0.74
HPS1-202ENST00000338546 SUSD4Q5VX71 490 aa19.69■□□□□ 0.74
HPS1-202ENST00000338546 ZNF594Q96JF6 807 aaPredicted RBP19.69■□□□□ 0.74
HPS1-202ENST00000338546 DBNDD2Q9BQY9 259 aa19.69■□□□□ 0.74
HPS1-202ENST00000338546 BOLA2Q9H3K6 86 aa19.69■□□□□ 0.74
HPS1-202ENST00000338546 LY75O60449 1722 aa19.69■□□□□ 0.74
HPS1-202ENST00000338546 RTL9Q8NET4 1388 aa19.68■□□□□ 0.74
HPS1-202ENST00000338546 K7ELQ4 463 aaPredicted RBP19.68■□□□□ 0.74
HPS1-202ENST00000338546 RPS6KA4O75676 772 aa19.68■□□□□ 0.74
HPS1-202ENST00000338546 ITGA6P23229 1130 aa19.68■□□□□ 0.74
HPS1-202ENST00000338546 HMGB2P26583 209 aaKnown RBP19.68■□□□□ 0.74
HPS1-202ENST00000338546 QTRT2Q9H974 415 aaKnown RBP19.68■□□□□ 0.74
HPS1-202ENST00000338546 HSPA4P34932 840 aa19.67■□□□□ 0.74
HPS1-202ENST00000338546 BCL11BQ9C0K0 894 aaPredicted RBP19.67■□□□□ 0.74
HPS1-202ENST00000338546 LSG1Q9H089 658 aaKnown RBP19.67■□□□□ 0.74
HPS1-202ENST00000338546 RIPOR2Q9Y4F9 1068 aa19.67■□□□□ 0.74
HPS1-202ENST00000338546 MCM2P49736 904 aa19.66■□□□□ 0.74
HPS1-202ENST00000338546 CWC27Q6UX04 472 aaKnown RBP19.66■□□□□ 0.74
HPS1-202ENST00000338546 PUS3Q9BZE2 481 aaKnown RBP19.66■□□□□ 0.74
HPS1-202ENST00000338546 GREM2Q9H772 168 aa19.66■□□□□ 0.74
HPS1-202ENST00000338546 CCNL1Q9UK58 526 aaPredicted RBP19.66■□□□□ 0.74
HPS1-202ENST00000338546 NIP7Q9Y221 180 aaKnown RBP eCLIP19.66■□□□□ 0.74
HPS1-202ENST00000338546 LAMB2P55268 1798 aa19.66■□□□□ 0.74
HPS1-202ENST00000338546 ABCC12Q96J65 1359 aa19.66■□□□□ 0.74
HPS1-202ENST00000338546 SPEF2Q9C093 1822 aa19.66■□□□□ 0.74
HPS1-202ENST00000338546 A0A1B0GUL7 405 aa19.66■□□□□ 0.74
HPS1-202ENST00000338546 NTSR2O95665 410 aa19.66■□□□□ 0.74
HPS1-202ENST00000338546 SYNE4Q8N205 404 aa19.66■□□□□ 0.74
HPS1-202ENST00000338546 NEUROD6Q96NK8 337 aa19.66■□□□□ 0.74
HPS1-202ENST00000338546 FSD1Q9BTV5 496 aa19.66■□□□□ 0.74
HPS1-202ENST00000338546 LDHAL6AQ6ZMR3 332 aa19.65■□□□□ 0.74
HPS1-202ENST00000338546 NARFQ9UHQ1 456 aa19.65■□□□□ 0.74
HPS1-202ENST00000338546 SCN7AQ01118 1682 aa19.64■□□□□ 0.74
HPS1-202ENST00000338546 PTF1AQ7RTS3 328 aa19.64■□□□□ 0.73
HPS1-202ENST00000338546 IL25Q9H293 177 aa19.64■□□□□ 0.73
HPS1-202ENST00000338546 CIZ1Q9ULV3 898 aaPredicted RBP19.64■□□□□ 0.73
HPS1-202ENST00000338546 LRP5O75197 1615 aa19.63■□□□□ 0.73
HPS1-202ENST00000338546 TIMM10P62072 90 aa19.63■□□□□ 0.73
HPS1-202ENST00000338546 CCDC152Q4G0S7 254 aa19.63■□□□□ 0.73
HPS1-202ENST00000338546 CCDC158Q5M9N0 1113 aa19.63■□□□□ 0.73
HPS1-202ENST00000338546 FAM196AQ6ZSG2 479 aa19.63■□□□□ 0.73
HPS1-202ENST00000338546 MROH5Q6ZUA9 1318 aa19.63■□□□□ 0.73
HPS1-202ENST00000338546 TAF1LQ8IZX4 1826 aa19.62■□□□□ 0.73
HPS1-202ENST00000338546 KCNB2Q92953 911 aa19.62■□□□□ 0.73
HPS1-202ENST00000338546 CNNM1Q9NRU3 951 aa19.62■□□□□ 0.73
HPS1-202ENST00000338546 CHMP5Q9NZZ3 219 aa19.62■□□□□ 0.73
HPS1-202ENST00000338546 LRRFIP1Q32MZ4 808 aaKnown RBP19.61■□□□□ 0.73
HPS1-202ENST00000338546 METTL24Q5JXM2 366 aa19.61■□□□□ 0.73
HPS1-202ENST00000338546 KBTBD3Q8NAB2 608 aa19.61■□□□□ 0.73
HPS1-202ENST00000338546 ZNF512BQ96KM6 892 aaPredicted RBP19.61■□□□□ 0.73
HPS1-202ENST00000338546 RTCBQ9Y3I0 505 aaKnown RBP19.61■□□□□ 0.73
HPS1-202ENST00000338546 RIC1Q4ADV7 1423 aa19.61■□□□□ 0.73
HPS1-202ENST00000338546 DDX60Q8IY21 1712 aaKnown RBP19.61■□□□□ 0.73
HPS1-202ENST00000338546 MED23Q9ULK4 1368 aa19.61■□□□□ 0.73
HPS1-202ENST00000338546 CD2BP2O95400 341 aaKnown RBP19.61■□□□□ 0.73
HPS1-202ENST00000338546 DDIT3P35638 169 aa19.61■□□□□ 0.73
HPS1-202ENST00000338546 NMIQ13287 307 aaPredicted RBP19.61■□□□□ 0.73
HPS1-202ENST00000338546 SLC10A5Q5PT55 438 aa19.61■□□□□ 0.73
HPS1-202ENST00000338546 CCDC85AQ96PX6 553 aaPredicted RBP19.61■□□□□ 0.73
HPS1-202ENST00000338546 NYXQ9GZU5 481 aa19.61■□□□□ 0.73
HPS1-202ENST00000338546 SLKQ9H2G2 1235 aaPredicted RBP19.61■□□□□ 0.73
HPS1-202ENST00000338546 CCDC171Q6TFL3 1326 aa19.6■□□□□ 0.73
HPS1-202ENST00000338546 IFIT1P09914 478 aaKnown RBP19.6■□□□□ 0.73
HPS1-202ENST00000338546 ATP2B3Q16720 1220 aa19.6■□□□□ 0.73
HPS1-202ENST00000338546 VGLL2Q8N8G2 317 aa19.6■□□□□ 0.73
HPS1-202ENST00000338546 XAGE2Q96GT9 111 aa19.6■□□□□ 0.73
HPS1-202ENST00000338546 PAG1Q9NWQ8 432 aa19.6■□□□□ 0.73
HPS1-202ENST00000338546 ZPR1O75312 459 aa19.59■□□□□ 0.73
HPS1-202ENST00000338546 PDE8BO95263 885 aa19.59■□□□□ 0.73
HPS1-202ENST00000338546 ADRA2BP18089 450 aa19.59■□□□□ 0.73
HPS1-202ENST00000338546 SLC27A3Q5K4L6 730 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms