RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 KMT5BQ4FZB7 885 aa15.26■□□□□ 0.03
COL2A1-201ENST00000337299 ZNF530Q6P9A1 599 aaPredicted RBP15.26■□□□□ 0.03
COL2A1-201ENST00000337299 G2E3Q7L622 706 aa15.26■□□□□ 0.03
COL2A1-201ENST00000337299 TAX1BP1Q86VP1 789 aa15.26■□□□□ 0.03
COL2A1-201ENST00000337299 ZSCAN16Q9H4T2 348 aaPredicted RBP15.26■□□□□ 0.03
COL2A1-201ENST00000337299 ZCCHC17Q9NP64 241 aaKnown RBP15.26■□□□□ 0.03
COL2A1-201ENST00000337299 MTMR7Q9Y216 660 aa15.26■□□□□ 0.03
COL2A1-201ENST00000337299 PPIP5K1Q6PFW1 1433 aa15.26■□□□□ 0.03
COL2A1-201ENST00000337299 MARCH6O60337 910 aa15.26■□□□□ 0.03
COL2A1-201ENST00000337299 WDHD1O75717 1129 aaPredicted RBP15.26■□□□□ 0.03
COL2A1-201ENST00000337299 NF2P35240 595 aa15.26■□□□□ 0.03
COL2A1-201ENST00000337299 MSH6P52701 1360 aa15.26■□□□□ 0.03
COL2A1-201ENST00000337299 POTEB2H3BUK9 544 aa15.26■□□□□ 0.03
COL2A1-201ENST00000337299 ZNF569Q5MCW4 686 aa15.26■□□□□ 0.03
COL2A1-201ENST00000337299 FKBP15Q5T1M5 1219 aa15.26■□□□□ 0.03
COL2A1-201ENST00000337299 BCCIPQ9P287 314 aaKnown RBP eCLIP15.26■□□□□ 0.03
COL2A1-201ENST00000337299 SAMD9Q5K651 1589 aa15.25■□□□□ 0.03
COL2A1-201ENST00000337299 SSBP05455 408 aaKnown RBP eCLIP15.25■□□□□ 0.03
COL2A1-201ENST00000337299 MRVI1Q9Y6F6 885 aa15.25■□□□□ 0.03
COL2A1-201ENST00000337299 GBP6Q6ZN66 633 aa15.25■□□□□ 0.03
COL2A1-201ENST00000337299 CHST3Q7LGC8 479 aa15.25■□□□□ 0.03
COL2A1-201ENST00000337299 BANK1Q8NDB2 785 aa15.25■□□□□ 0.03
COL2A1-201ENST00000337299 BCORL1Q5H9F3 1711 aa15.25■□□□□ 0.03
COL2A1-201ENST00000337299 EIF5P55010 431 aaKnown RBP15.25■□□□□ 0.03
COL2A1-201ENST00000337299 HSP90AB2PQ58FF8 381 aa15.25■□□□□ 0.03
COL2A1-201ENST00000337299 Q6ZUG5 572 aa15.25■□□□□ 0.03
COL2A1-201ENST00000337299 SIRT2Q8IXJ6 389 aa15.25■□□□□ 0.03
COL2A1-201ENST00000337299 MAGEC2Q9UBF1 373 aaPredicted RBP15.25■□□□□ 0.03
COL2A1-201ENST00000337299 DUOX2Q9NRD8 1548 aa15.25■□□□□ 0.03
COL2A1-201ENST00000337299 ERICH2A1L162 156 aa15.24■□□□□ 0.03
COL2A1-201ENST00000337299 SYKP43405 635 aa15.24■□□□□ 0.03
COL2A1-201ENST00000337299 CLCN6P51797 869 aa15.24■□□□□ 0.03
COL2A1-201ENST00000337299 HAND2P61296 217 aa15.24■□□□□ 0.03
COL2A1-201ENST00000337299 ATRIPQ8WXE1 791 aa15.24■□□□□ 0.03
COL2A1-201ENST00000337299 EVI5LQ96CN4 794 aa15.24■□□□□ 0.03
COL2A1-201ENST00000337299 CAPZA3Q96KX2 299 aa15.24■□□□□ 0.03
COL2A1-201ENST00000337299 XPO4Q9C0E2 1151 aaKnown RBP15.24■□□□□ 0.03
COL2A1-201ENST00000337299 PLEKHA4Q9H4M7 779 aa15.24■□□□□ 0.03
COL2A1-201ENST00000337299 MTMR6Q9Y217 621 aa15.24■□□□□ 0.03
COL2A1-201ENST00000337299 RRP15Q9Y3B9 282 aaKnown RBP15.24■□□□□ 0.03
COL2A1-201ENST00000337299 ARHGEF12Q9NZN5 1544 aa15.24■□□□□ 0.03
COL2A1-201ENST00000337299 ABCC2Q92887 1545 aa15.24■□□□□ 0.03
COL2A1-201ENST00000337299 MYL6BP14649 208 aa15.24■□□□□ 0.03
COL2A1-201ENST00000337299 ATP8B2P98198 1209 aa15.24■□□□□ 0.03
COL2A1-201ENST00000337299 RAD51AP2Q09MP3 1159 aa15.24■□□□□ 0.03
COL2A1-201ENST00000337299 CREB3L3Q68CJ9 461 aa15.24■□□□□ 0.03
COL2A1-201ENST00000337299 RTL1A6NKG5 1358 aa15.24■□□□□ 0.03
COL2A1-201ENST00000337299 PTPN21Q16825 1174 aa15.24■□□□□ 0.03
COL2A1-201ENST00000337299 HDXQ7Z353 690 aa15.24■□□□□ 0.03
COL2A1-201ENST00000337299 MYCBPQ99417 103 aaPredicted RBP15.24■□□□□ 0.03
COL2A1-201ENST00000337299 ORC3Q9UBD5 711 aaPredicted RBP15.24■□□□□ 0.03
COL2A1-201ENST00000337299 KDM5CP41229 1560 aa15.24■□□□□ 0.03
COL2A1-201ENST00000337299 PPM1EQ8WY54 764 aa15.23■□□□□ 0.03
COL2A1-201ENST00000337299 CCDC47Q96A33 483 aaKnown RBP15.23■□□□□ 0.03
COL2A1-201ENST00000337299 VPS53Q5VIR6 699 aa15.23■□□□□ 0.03
COL2A1-201ENST00000337299 CCDC144CPQ8IYA2 1237 aa15.23■□□□□ 0.03
COL2A1-201ENST00000337299 OTUD6BQ8N6M0 293 aa15.23■□□□□ 0.03
COL2A1-201ENST00000337299 PA2G4Q9UQ80 394 aaKnown RBP15.23■□□□□ 0.03
COL2A1-201ENST00000337299 ACEP12821 1306 aa15.23■□□□□ 0.03
COL2A1-201ENST00000337299 GBP2P32456 591 aaPredicted RBP15.23■□□□□ 0.03
COL2A1-201ENST00000337299 NUP133Q8WUM0 1156 aa15.23■□□□□ 0.03
COL2A1-201ENST00000337299 JADE2Q9NQC1 790 aa15.23■□□□□ 0.03
COL2A1-201ENST00000337299 PNMA6EA0A0J9YXQ4 647 aa15.23■□□□□ 0.03
COL2A1-201ENST00000337299 GOLGA6L7A0A1B0GV03 622 aa15.23■□□□□ 0.03
COL2A1-201ENST00000337299 JAK2O60674 1132 aa15.23■□□□□ 0.03
COL2A1-201ENST00000337299 RUFY3Q7L099 469 aa15.23■□□□□ 0.03
COL2A1-201ENST00000337299 CEP89Q96ST8 783 aa15.23■□□□□ 0.03
COL2A1-201ENST00000337299 GOLGA8BA8MQT2 603 aa15.22■□□□□ 0.03
COL2A1-201ENST00000337299 MYO1CO00159 1063 aa15.22■□□□□ 0.03
COL2A1-201ENST00000337299 PBRM1Q86U86 1689 aa15.22■□□□□ 0.03
COL2A1-201ENST00000337299 CCDC175P0C221 793 aa15.22■□□□□ 0.03
COL2A1-201ENST00000337299 LIG3P49916 1009 aa15.22■□□□□ 0.03
COL2A1-201ENST00000337299 NMIQ13287 307 aaPredicted RBP15.22■□□□□ 0.03
COL2A1-201ENST00000337299 PLEKHO1Q53GL0 409 aaPredicted RBP15.22■□□□□ 0.03
COL2A1-201ENST00000337299 ZNF518AQ6AHZ1 1483 aa15.22■□□□□ 0.03
COL2A1-201ENST00000337299 PI4KAP2A4QPH2 592 aa15.22■□□□□ 0.03
COL2A1-201ENST00000337299 CHMP4BP1P59074 171 aa15.22■□□□□ 0.03
COL2A1-201ENST00000337299 PI4KAP1Q8N8J0 262 aa15.22■□□□□ 0.03
COL2A1-201ENST00000337299 PNMA6AP0CW24 399 aaPredicted RBP15.21■□□□□ 0.03
COL2A1-201ENST00000337299 MAP2K2P36507 400 aa15.21■□□□□ 0.03
COL2A1-201ENST00000337299 ETF1P62495 437 aaKnown RBP15.21■□□□□ 0.03
COL2A1-201ENST00000337299 BAG1Q99933 345 aaPredicted RBP15.21■□□□□ 0.03
COL2A1-201ENST00000337299 SART3Q15020 963 aaKnown RBP15.21■□□□□ 0.03
COL2A1-201ENST00000337299 ME3Q16798 604 aa15.21■□□□□ 0.03
COL2A1-201ENST00000337299 SPTLC3Q9NUV7 552 aa15.21■□□□□ 0.03
COL2A1-201ENST00000337299 TMEM51Q9NW97 253 aa15.21■□□□□ 0.03
COL2A1-201ENST00000337299 CFAP65Q6ZU64 1925 aaKnown RBP15.21■□□□□ 0.02
COL2A1-201ENST00000337299 POGZQ7Z3K3 1410 aa15.21■□□□□ 0.02
COL2A1-201ENST00000337299 CTAGE9A4FU28 777 aa15.2■□□□□ 0.02
COL2A1-201ENST00000337299 SGSM2O43147 1006 aa15.2■□□□□ 0.02
COL2A1-201ENST00000337299 HSPA4P34932 840 aa15.2■□□□□ 0.02
COL2A1-201ENST00000337299 STX17P56962 302 aa15.2■□□□□ 0.02
COL2A1-201ENST00000337299 CCDC102BQ68D86 513 aa15.2■□□□□ 0.02
COL2A1-201ENST00000337299 PHF8Q9UPP1 1060 aa15.2■□□□□ 0.02
COL2A1-201ENST00000337299 FANCCQ00597 558 aa15.2■□□□□ 0.02
COL2A1-201ENST00000337299 IQCEQ6IPM2 695 aa15.2■□□□□ 0.02
COL2A1-201ENST00000337299 UNC5CLQ8IV45 518 aa15.2■□□□□ 0.02
COL2A1-201ENST00000337299 RASEFQ8IZ41 740 aa15.2■□□□□ 0.02
COL2A1-201ENST00000337299 SCLT1Q96NL6 688 aa15.2■□□□□ 0.02
COL2A1-201ENST00000337299 USP27XA6NNY8 438 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms