RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.63□□□□□ -0.71
SNCA-201ENST00000336904 SMC3Q9UQE7 1217 aa10.63□□□□□ -0.71
SNCA-201ENST00000336904 COL5A2P05997 1499 aaPredicted RBP10.63□□□□□ -0.71
SNCA-201ENST00000336904 SYT1P21579 422 aa10.63□□□□□ -0.71
SNCA-201ENST00000336904 USP48Q86UV5 1035 aa10.63□□□□□ -0.71
SNCA-201ENST00000336904 ACSBG1Q96GR2 724 aa10.63□□□□□ -0.71
SNCA-201ENST00000336904 CWC25Q9NXE8 425 aaPredicted RBP10.63□□□□□ -0.71
SNCA-201ENST00000336904 LIMCH1Q9UPQ0 1083 aa10.63□□□□□ -0.71
SNCA-201ENST00000336904 USP42Q9H9J4 1324 aaKnown RBP10.62□□□□□ -0.71
SNCA-201ENST00000336904 EIF5BO60841 1220 aaKnown RBP10.62□□□□□ -0.71
SNCA-201ENST00000336904 ADORA1P30542 326 aa10.62□□□□□ -0.71
SNCA-201ENST00000336904 CASP7P55210 303 aa10.62□□□□□ -0.71
SNCA-201ENST00000336904 FKBP4Q02790 459 aaKnown RBP eCLIP10.62□□□□□ -0.71
SNCA-201ENST00000336904 NECTIN1Q15223 517 aa10.62□□□□□ -0.71
SNCA-201ENST00000336904 HLFQ16534 295 aa10.62□□□□□ -0.71
SNCA-201ENST00000336904 SMIM5Q71RC9 77 aa10.62□□□□□ -0.71
SNCA-201ENST00000336904 CYP46A1Q9Y6A2 500 aa10.62□□□□□ -0.71
SNCA-201ENST00000336904 SNAP23O00161 211 aa10.62□□□□□ -0.71
SNCA-201ENST00000336904 KCNQ4P56696 695 aa10.62□□□□□ -0.71
SNCA-201ENST00000336904 RAB11FIP4Q86YS3 637 aa10.62□□□□□ -0.71
SNCA-201ENST00000336904 TBC1D2BQ9UPU7 963 aa10.62□□□□□ -0.71
SNCA-201ENST00000336904 CRYBG1Q9Y4K1 1723 aa10.62□□□□□ -0.71
SNCA-201ENST00000336904 NUTM2BA6NNL0 878 aaPredicted RBP10.61□□□□□ -0.71
SNCA-201ENST00000336904 NUTM2EB1AL46 878 aaPredicted RBP10.61□□□□□ -0.71
SNCA-201ENST00000336904 NUTM2AQ8IVF1 878 aaPredicted RBP10.61□□□□□ -0.71
SNCA-201ENST00000336904 ZKSCAN1P17029 563 aaPredicted RBP10.61□□□□□ -0.71
SNCA-201ENST00000336904 DNM1Q05193 864 aaKnown RBP10.61□□□□□ -0.71
SNCA-201ENST00000336904 ATG9AQ7Z3C6 839 aa10.61□□□□□ -0.71
SNCA-201ENST00000336904 DDX11Q96FC9 970 aa10.61□□□□□ -0.71
SNCA-201ENST00000336904 COPRSQ9NQ92 184 aa10.61□□□□□ -0.71
SNCA-201ENST00000336904 SOS2Q07890 1332 aaPredicted RBP10.61□□□□□ -0.71
SNCA-201ENST00000336904 KDM4AO75164 1064 aa10.6□□□□□ -0.71
SNCA-201ENST00000336904 MCM2P49736 904 aa10.6□□□□□ -0.71
SNCA-201ENST00000336904 ARFGEF2Q9Y6D5 1785 aa10.6□□□□□ -0.71
SNCA-201ENST00000336904 ZNF609O15014 1411 aa10.6□□□□□ -0.71
SNCA-201ENST00000336904 STX6O43752 255 aa10.6□□□□□ -0.71
SNCA-201ENST00000336904 TTLL5Q6EMB2 1281 aa10.6□□□□□ -0.71
SNCA-201ENST00000336904 JAK2O60674 1132 aa10.6□□□□□ -0.71
SNCA-201ENST00000336904 HSP90B1P14625 803 aaKnown RBP10.6□□□□□ -0.71
SNCA-201ENST00000336904 HAND2P61296 217 aa10.6□□□□□ -0.71
SNCA-201ENST00000336904 SCARF1Q14162 830 aa10.6□□□□□ -0.71
SNCA-201ENST00000336904 HELBQ8NG08 1087 aaPredicted RBP10.6□□□□□ -0.71
SNCA-201ENST00000336904 MAP4K1Q92918 833 aa10.6□□□□□ -0.71
SNCA-201ENST00000336904 SLC4A9Q96Q91 983 aa10.6□□□□□ -0.71
SNCA-201ENST00000336904 CPDO75976 1380 aa10.6□□□□□ -0.71
SNCA-201ENST00000336904 A0A1B0GUL7 405 aa10.59□□□□□ -0.71
SNCA-201ENST00000336904 TAF5LO75529 589 aa10.59□□□□□ -0.71
SNCA-201ENST00000336904 CLEC17AQ6ZS10 378 aa10.59□□□□□ -0.71
SNCA-201ENST00000336904 TRIM44Q96DX7 344 aaPredicted RBP10.59□□□□□ -0.71
SNCA-201ENST00000336904 CARD10Q9BWT7 1032 aa10.59□□□□□ -0.71
SNCA-201ENST00000336904 HDAC5Q9UQL6 1122 aa10.59□□□□□ -0.71
SNCA-201ENST00000336904 ADAMTS7Q9UKP4 1686 aa10.59□□□□□ -0.71
SNCA-201ENST00000336904 DCCP43146 1447 aa10.59□□□□□ -0.71
SNCA-201ENST00000336904 H7C1W4 665 aa10.59□□□□□ -0.71
SNCA-201ENST00000336904 TAF7LQ5H9L4 462 aa10.59□□□□□ -0.71
SNCA-201ENST00000336904 BLOC1S2Q6QNY1 142 aa10.59□□□□□ -0.71
SNCA-201ENST00000336904 CDC37L1Q7L3B6 337 aa10.59□□□□□ -0.71
SNCA-201ENST00000336904 ZSWIM6Q9HCJ5 1215 aa10.59□□□□□ -0.71
SNCA-201ENST00000336904 ATG3Q9NT62 314 aa10.59□□□□□ -0.71
SNCA-201ENST00000336904 TFIP11Q9UBB9 837 aaKnown RBP10.59□□□□□ -0.71
SNCA-201ENST00000336904 LMTK3Q96Q04 1460 aa10.58□□□□□ -0.72
SNCA-201ENST00000336904 FGD1P98174 961 aa10.58□□□□□ -0.72
SNCA-201ENST00000336904 RABL6Q3YEC7 729 aaPredicted RBP10.58□□□□□ -0.72
SNCA-201ENST00000336904 GORABQ5T7V8 394 aa10.58□□□□□ -0.72
SNCA-201ENST00000336904 GPHNQ9NQX3 736 aaPredicted RBP10.58□□□□□ -0.72
SNCA-201ENST00000336904 ZBTB1Q9Y2K1 713 aa10.58□□□□□ -0.72
SNCA-201ENST00000336904 CYP21A2P08686 494 aa10.58□□□□□ -0.72
SNCA-201ENST00000336904 ZSCAN22P10073 491 aaPredicted RBP10.58□□□□□ -0.72
SNCA-201ENST00000336904 CEBPZQ03701 1054 aaKnown RBP10.58□□□□□ -0.72
SNCA-201ENST00000336904 FAM43AQ8N2R8 423 aa10.58□□□□□ -0.72
SNCA-201ENST00000336904 INTS4Q96HW7 963 aaKnown RBP10.58□□□□□ -0.72
SNCA-201ENST00000336904 WDR33Q9C0J8 1336 aaKnown RBP10.58□□□□□ -0.72
SNCA-201ENST00000336904 GLI3P10071 1580 aa10.58□□□□□ -0.72
SNCA-201ENST00000336904 ATP5JP18859 108 aa10.58□□□□□ -0.72
SNCA-201ENST00000336904 PLCB2Q00722 1185 aa10.58□□□□□ -0.72
SNCA-201ENST00000336904 TOB2Q14106 344 aaPredicted RBP10.58□□□□□ -0.72
SNCA-201ENST00000336904 STOX1Q6ZVD7 989 aa10.58□□□□□ -0.72
SNCA-201ENST00000336904 STK11IPQ8N1F8 1099 aa10.58□□□□□ -0.72
SNCA-201ENST00000336904 ERVV-2B6SEH9 535 aa10.57□□□□□ -0.72
SNCA-201ENST00000336904 IFIT1P09914 478 aaKnown RBP10.57□□□□□ -0.72
SNCA-201ENST00000336904 CCT2P78371 535 aaKnown RBP10.57□□□□□ -0.72
SNCA-201ENST00000336904 CCDC57Q2TAC2 916 aa10.57□□□□□ -0.72
SNCA-201ENST00000336904 NCOA5Q9HCD5 579 aaKnown RBP10.57□□□□□ -0.72
SNCA-201ENST00000336904 PAG1Q9NWQ8 432 aa10.57□□□□□ -0.72
SNCA-201ENST00000336904 F13A1P00488 732 aa10.57□□□□□ -0.72
SNCA-201ENST00000336904 PIP4K2BP78356 416 aa10.57□□□□□ -0.72
SNCA-201ENST00000336904 GUCY1B3Q02153 619 aa10.57□□□□□ -0.72
SNCA-201ENST00000336904 Q6ZUG5 572 aa10.57□□□□□ -0.72
SNCA-201ENST00000336904 BRF1Q92994 677 aa10.57□□□□□ -0.72
SNCA-201ENST00000336904 STRCQ7RTU9 1775 aa10.57□□□□□ -0.72
SNCA-201ENST00000336904 KCPQ6ZWJ8 1503 aa10.56□□□□□ -0.72
SNCA-201ENST00000336904 MED23Q9ULK4 1368 aa10.56□□□□□ -0.72
SNCA-201ENST00000336904 WASHC4Q2M389 1173 aa10.56□□□□□ -0.72
SNCA-201ENST00000336904 LARP1BQ659C4 914 aaKnown RBP10.56□□□□□ -0.72
SNCA-201ENST00000336904 GREM2Q9H772 168 aa10.56□□□□□ -0.72
SNCA-201ENST00000336904 MRC1P22897 1456 aa10.56□□□□□ -0.72
SNCA-201ENST00000336904 PKD1L3Q7Z443 1732 aa10.56□□□□□ -0.72
SNCA-201ENST00000336904 M0R2C6 588 aa10.56□□□□□ -0.72
SNCA-201ENST00000336904 EYA2O00167 538 aa10.56□□□□□ -0.72
SNCA-201ENST00000336904 HAUS7Q99871 368 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms