RNA–Protein interactions for RNA: ENST00000336803.1

CLDN2-201, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN2, Length 2,959 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-201ENST00000336803 MAP4K1Q92918 833 aa11.1□□□□□ -0.63
CLDN2-201ENST00000336803 HAUS7Q99871 368 aa11.1□□□□□ -0.63
CLDN2-201ENST00000336803 FOXD4L1Q9NU39 408 aa11.1□□□□□ -0.63
CLDN2-201ENST00000336803 CCDC171Q6TFL3 1326 aa11.1□□□□□ -0.63
CLDN2-201ENST00000336803 EYA2O00167 538 aa11.1□□□□□ -0.63
CLDN2-201ENST00000336803 PTH1RQ03431 593 aa11.1□□□□□ -0.63
CLDN2-201ENST00000336803 KLHL34Q8N239 644 aa11.1□□□□□ -0.63
CLDN2-201ENST00000336803 BOLA2Q9H3K6 86 aa11.1□□□□□ -0.63
CLDN2-201ENST00000336803 IL6STP40189 918 aaPredicted RBP11.1□□□□□ -0.63
CLDN2-201ENST00000336803 NMIQ13287 307 aaPredicted RBP11.1□□□□□ -0.63
CLDN2-201ENST00000336803 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.1□□□□□ -0.63
CLDN2-201ENST00000336803 MYH3P11055 1940 aa11.09□□□□□ -0.63
CLDN2-201ENST00000336803 TRAK2O60296 914 aa11.09□□□□□ -0.63
CLDN2-201ENST00000336803 SSFA2P28290 1259 aa11.09□□□□□ -0.63
CLDN2-201ENST00000336803 RASEFQ8IZ41 740 aa11.09□□□□□ -0.63
CLDN2-201ENST00000336803 PALLDQ8WX93 1383 aa11.09□□□□□ -0.63
CLDN2-201ENST00000336803 ZGPATQ8N5A5 531 aaKnown RBP11.09□□□□□ -0.63
CLDN2-201ENST00000336803 PRIM1P49642 420 aaKnown RBP11.08□□□□□ -0.64
CLDN2-201ENST00000336803 DDB1Q16531 1140 aa11.08□□□□□ -0.64
CLDN2-201ENST00000336803 SKOR2Q2VWA4 1001 aaPredicted RBP11.08□□□□□ -0.64
CLDN2-201ENST00000336803 TSGA10IPQ3SY00 556 aa11.08□□□□□ -0.64
CLDN2-201ENST00000336803 DBNDD2Q9BQY9 259 aa11.08□□□□□ -0.64
CLDN2-201ENST00000336803 TOM1O60784 492 aa11.08□□□□□ -0.64
CLDN2-201ENST00000336803 NLRP10Q86W26 655 aa11.08□□□□□ -0.64
CLDN2-201ENST00000336803 FAM227BQ96M60 508 aa11.08□□□□□ -0.64
CLDN2-201ENST00000336803 FSD1Q9BTV5 496 aa11.08□□□□□ -0.64
CLDN2-201ENST00000336803 ZSWIM6Q9HCJ5 1215 aa11.08□□□□□ -0.64
CLDN2-201ENST00000336803 A0A0D9SFI3 127 aa11.07□□□□□ -0.64
CLDN2-201ENST00000336803 COL5A3P25940 1745 aaPredicted RBP11.07□□□□□ -0.64
CLDN2-201ENST00000336803 USPL1Q5W0Q7 1092 aa11.07□□□□□ -0.64
CLDN2-201ENST00000336803 ALDH8A1Q9H2A2 487 aaPredicted RBP11.07□□□□□ -0.64
CLDN2-201ENST00000336803 RPAP1Q9BWH6 1393 aaPredicted RBP11.07□□□□□ -0.64
CLDN2-201ENST00000336803 BAG4O95429 457 aaKnown RBP11.07□□□□□ -0.64
CLDN2-201ENST00000336803 HLFQ16534 295 aa11.07□□□□□ -0.64
CLDN2-201ENST00000336803 MARCH10Q8NA82 808 aaPredicted RBP11.07□□□□□ -0.64
CLDN2-201ENST00000336803 ZDHHC9Q9Y397 364 aa11.07□□□□□ -0.64
CLDN2-201ENST00000336803 LRP5O75197 1615 aa11.07□□□□□ -0.64
CLDN2-201ENST00000336803 LRRC24Q50LG9 513 aa11.07□□□□□ -0.64
CLDN2-201ENST00000336803 VPS53Q5VIR6 699 aa11.07□□□□□ -0.64
CLDN2-201ENST00000336803 ZNF34Q8IZ26 560 aa11.07□□□□□ -0.64
CLDN2-201ENST00000336803 AK7Q96M32 723 aa11.07□□□□□ -0.64
CLDN2-201ENST00000336803 ZBTB1Q9Y2K1 713 aa11.07□□□□□ -0.64
CLDN2-201ENST00000336803 CHMP3Q9Y3E7 222 aa11.07□□□□□ -0.64
CLDN2-201ENST00000336803 ADAMTS2O95450 1211 aa11.06□□□□□ -0.64
CLDN2-201ENST00000336803 EIF5P55010 431 aaKnown RBP11.06□□□□□ -0.64
CLDN2-201ENST00000336803 UPF3BQ9BZI7 483 aaKnown RBP11.06□□□□□ -0.64
CLDN2-201ENST00000336803 RBM8AQ9Y5S9 174 aaKnown RBP11.06□□□□□ -0.64
CLDN2-201ENST00000336803 CCDC57Q2TAC2 916 aa11.06□□□□□ -0.64
CLDN2-201ENST00000336803 CREB3L3Q68CJ9 461 aa11.06□□□□□ -0.64
CLDN2-201ENST00000336803 INTS5Q6P9B9 1019 aaKnown RBP11.06□□□□□ -0.64
CLDN2-201ENST00000336803 KBTBD3Q8NAB2 608 aa11.06□□□□□ -0.64
CLDN2-201ENST00000336803 SH3TC1Q8TE82 1336 aa11.06□□□□□ -0.64
CLDN2-201ENST00000336803 ABCC12Q96J65 1359 aa11.06□□□□□ -0.64
CLDN2-201ENST00000336803 LAMB2P55268 1798 aa11.05□□□□□ -0.64
CLDN2-201ENST00000336803 TAF5LO75529 589 aa11.05□□□□□ -0.64
CLDN2-201ENST00000336803 BRD1O95696 1058 aa11.05□□□□□ -0.64
CLDN2-201ENST00000336803 PRPF40BQ6NWY9 871 aaKnown RBP11.05□□□□□ -0.64
CLDN2-201ENST00000336803 HMG20BQ9P0W2 317 aa11.05□□□□□ -0.64
CLDN2-201ENST00000336803 LIMCH1Q9UPQ0 1083 aa11.05□□□□□ -0.64
CLDN2-201ENST00000336803 AKAP2Q9Y2D5 859 aa11.05□□□□□ -0.64
CLDN2-201ENST00000336803 BCORQ6W2J9 1755 aa11.05□□□□□ -0.64
CLDN2-201ENST00000336803 SLC27A2O14975 620 aa11.05□□□□□ -0.64
CLDN2-201ENST00000336803 AK2P54819 239 aa11.05□□□□□ -0.64
CLDN2-201ENST00000336803 RUFY3Q7L099 469 aa11.05□□□□□ -0.64
CLDN2-201ENST00000336803 FAM89AQ96GI7 184 aa11.05□□□□□ -0.64
CLDN2-201ENST00000336803 ZNF594Q96JF6 807 aaPredicted RBP11.05□□□□□ -0.64
CLDN2-201ENST00000336803 FSD2A1L4K1 749 aa11.04□□□□□ -0.64
CLDN2-201ENST00000336803 PKP1Q13835 747 aa11.04□□□□□ -0.64
CLDN2-201ENST00000336803 TTLL11Q8NHH1 800 aa11.04□□□□□ -0.64
CLDN2-201ENST00000336803 PUS3Q9BZE2 481 aaKnown RBP11.04□□□□□ -0.64
CLDN2-201ENST00000336803 A0A1B0GUL7 405 aa11.04□□□□□ -0.64
CLDN2-201ENST00000336803 GOLGA6L22H0YM25 854 aa11.04□□□□□ -0.64
CLDN2-201ENST00000336803 ZKSCAN1P17029 563 aaPredicted RBP11.04□□□□□ -0.64
CLDN2-201ENST00000336803 ZSCAN31Q96LW9 406 aaPredicted RBP11.04□□□□□ -0.64
CLDN2-201ENST00000336803 HELLSQ9NRZ9 838 aa11.04□□□□□ -0.64
CLDN2-201ENST00000336803 CCDC87Q9NVE4 849 aa11.04□□□□□ -0.64
CLDN2-201ENST00000336803 CEP126Q9P2H0 1117 aa11.04□□□□□ -0.64
CLDN2-201ENST00000336803 RIPOR2Q9Y4F9 1068 aa11.04□□□□□ -0.64
CLDN2-201ENST00000336803 RIC1Q4ADV7 1423 aa11.04□□□□□ -0.64
CLDN2-201ENST00000336803 ARAP2Q8WZ64 1704 aa11.04□□□□□ -0.64
CLDN2-201ENST00000336803 BCL9LQ86UU0 1499 aa11.04□□□□□ -0.64
CLDN2-201ENST00000336803 CASTP20810 708 aaKnown RBP11.04□□□□□ -0.64
CLDN2-201ENST00000336803 PSMA5P28066 241 aa11.04□□□□□ -0.64
CLDN2-201ENST00000336803 CTSWP56202 376 aa11.04□□□□□ -0.64
CLDN2-201ENST00000336803 TIMM10P62072 90 aa11.04□□□□□ -0.64
CLDN2-201ENST00000336803 IFIT5Q13325 482 aaKnown RBP11.04□□□□□ -0.64
CLDN2-201ENST00000336803 ADCK5Q3MIX3 580 aa11.04□□□□□ -0.64
CLDN2-201ENST00000336803 MCMDC2Q4G0Z9 681 aa11.04□□□□□ -0.64
CLDN2-201ENST00000336803 RNF20Q5VTR2 975 aa11.04□□□□□ -0.64
CLDN2-201ENST00000336803 ZNF589Q86UQ0 364 aaPredicted RBP11.04□□□□□ -0.64
CLDN2-201ENST00000336803 DZIP3Q86Y13 1208 aaKnown RBP11.04□□□□□ -0.64
CLDN2-201ENST00000336803 EDC3Q96F86 508 aaKnown RBP11.04□□□□□ -0.64
CLDN2-201ENST00000336803 PAG1Q9NWQ8 432 aa11.04□□□□□ -0.64
CLDN2-201ENST00000336803 CYP46A1Q9Y6A2 500 aa11.04□□□□□ -0.64
CLDN2-201ENST00000336803 SMARCC1Q92922 1105 aaPredicted RBP11.03□□□□□ -0.64
CLDN2-201ENST00000336803 SYTL4Q96C24 671 aaPredicted RBP11.03□□□□□ -0.64
CLDN2-201ENST00000336803 ISY1Q9ULR0 285 aaKnown RBP11.03□□□□□ -0.64
CLDN2-201ENST00000336803 DDX60Q8IY21 1712 aaKnown RBP11.03□□□□□ -0.64
CLDN2-201ENST00000336803 PDE8AO60658 829 aa11.03□□□□□ -0.64
CLDN2-201ENST00000336803 VPS72Q15906 364 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms