RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 GTF2E1P29083 439 aaPredicted RBP26.83■■□□□ 1.88
TPM1-204ENST00000334895 CTSWP56202 376 aa26.83■■□□□ 1.88
TPM1-204ENST00000334895 C3orf67Q6ZVT6 689 aa26.83■■□□□ 1.88
TPM1-204ENST00000334895 TTLL11Q8NHH1 800 aa26.83■■□□□ 1.88
TPM1-204ENST00000334895 SGIP1Q9BQI5 828 aa26.83■■□□□ 1.88
TPM1-204ENST00000334895 HMMRO75330 724 aa26.81■■□□□ 1.88
TPM1-204ENST00000334895 RFX5P48382 616 aaPredicted RBP26.8■■□□□ 1.88
TPM1-204ENST00000334895 RIC1Q4ADV7 1423 aa26.8■■□□□ 1.88
TPM1-204ENST00000334895 FAM161AQ3B820 660 aa26.79■■□□□ 1.88
TPM1-204ENST00000334895 CCDC85AQ96PX6 553 aaPredicted RBP26.79■■□□□ 1.88
TPM1-204ENST00000334895 CENPQQ7L2Z9 268 aaPredicted RBP26.79■■□□□ 1.88
TPM1-204ENST00000334895 GREM2Q9H772 168 aa26.79■■□□□ 1.88
TPM1-204ENST00000334895 DCTPP1Q9H773 170 aa26.79■■□□□ 1.88
TPM1-204ENST00000334895 CHMP3Q9Y3E7 222 aa26.79■■□□□ 1.88
TPM1-204ENST00000334895 PARP3Q9Y6F1 533 aa26.79■■□□□ 1.88
TPM1-204ENST00000334895 ANKRD31Q8N7Z5 1873 aa26.78■■□□□ 1.88
TPM1-204ENST00000334895 HSP90B1P14625 803 aaKnown RBP26.78■■□□□ 1.88
TPM1-204ENST00000334895 SMC5Q8IY18 1101 aa26.78■■□□□ 1.88
TPM1-204ENST00000334895 NPHP1O15259 732 aa26.77■■□□□ 1.88
TPM1-204ENST00000334895 POLD1P28340 1107 aa26.77■■□□□ 1.88
TPM1-204ENST00000334895 PA2G4Q9UQ80 394 aaKnown RBP26.77■■□□□ 1.88
TPM1-204ENST00000334895 KLHDC4Q8TBB5 520 aa26.76■■□□□ 1.87
TPM1-204ENST00000334895 ST5P78524 1137 aa26.76■■□□□ 1.87
TPM1-204ENST00000334895 SF3B3Q15393 1217 aaKnown RBP26.76■■□□□ 1.87
TPM1-204ENST00000334895 COL4A1P02462 1669 aa26.75■■□□□ 1.87
TPM1-204ENST00000334895 PTPN12Q05209 780 aaKnown RBP26.75■■□□□ 1.87
TPM1-204ENST00000334895 EXOC6BQ9Y2D4 811 aa26.75■■□□□ 1.87
TPM1-204ENST00000334895 RTL9Q8NET4 1388 aa26.74■■□□□ 1.87
TPM1-204ENST00000334895 NLRP3Q96P20 1036 aa26.74■■□□□ 1.87
TPM1-204ENST00000334895 COPRSQ9NQ92 184 aa26.74■■□□□ 1.87
TPM1-204ENST00000334895 ITGA6P23229 1130 aa26.73■■□□□ 1.87
TPM1-204ENST00000334895 GCC1Q96CN9 775 aa26.73■■□□□ 1.87
TPM1-204ENST00000334895 PPP1R1BQ9UD71 204 aaPredicted RBP26.73■■□□□ 1.87
TPM1-204ENST00000334895 NOP58Q9Y2X3 529 aaKnown RBP26.73■■□□□ 1.87
TPM1-204ENST00000334895 CCDC152Q4G0S7 254 aa26.72■■□□□ 1.87
TPM1-204ENST00000334895 ZNF594Q96JF6 807 aaPredicted RBP26.72■■□□□ 1.87
TPM1-204ENST00000334895 SURF6O75683 361 aaKnown RBP26.72■■□□□ 1.87
TPM1-204ENST00000334895 IFIT5Q13325 482 aaKnown RBP26.72■■□□□ 1.87
TPM1-204ENST00000334895 CCDC57Q2TAC2 916 aa26.72■■□□□ 1.87
TPM1-204ENST00000334895 SEC31BQ9NQW1 1179 aa26.72■■□□□ 1.87
TPM1-204ENST00000334895 TAF1P21675 1872 aa26.71■■□□□ 1.87
TPM1-204ENST00000334895 KLRG2A4D1S0 409 aaPredicted RBP26.7■■□□□ 1.86
TPM1-204ENST00000334895 ANKRD18BA2A2Z9 1011 aa26.69■■□□□ 1.86
TPM1-204ENST00000334895 CRY2Q49AN0 593 aa26.69■■□□□ 1.86
TPM1-204ENST00000334895 BRIP1Q9BX63 1249 aa26.69■■□□□ 1.86
TPM1-204ENST00000334895 SIL1Q9H173 461 aa26.69■■□□□ 1.86
TPM1-204ENST00000334895 KIF13BQ9NQT8 1826 aa26.69■■□□□ 1.86
TPM1-204ENST00000334895 COL11A2P13942 1736 aaPredicted RBP26.68■■□□□ 1.86
TPM1-204ENST00000334895 C10orf71Q711Q0 1435 aa26.67■■□□□ 1.86
TPM1-204ENST00000334895 PUS3Q9BZE2 481 aaKnown RBP26.67■■□□□ 1.86
TPM1-204ENST00000334895 SPEF2Q9C093 1822 aa26.67■■□□□ 1.86
TPM1-204ENST00000334895 APBB1O00213 710 aa26.66■■□□□ 1.86
TPM1-204ENST00000334895 KLHL34Q8N239 644 aa26.66■■□□□ 1.86
TPM1-204ENST00000334895 PDZRN3Q9UPQ7 1066 aa26.66■■□□□ 1.86
TPM1-204ENST00000334895 NUCB1Q02818 461 aa26.65■■□□□ 1.86
TPM1-204ENST00000334895 ATG9AQ7Z3C6 839 aa26.65■■□□□ 1.86
TPM1-204ENST00000334895 LRRC24Q50LG9 513 aa26.65■■□□□ 1.86
TPM1-204ENST00000334895 SKAP1Q86WV1 359 aa26.65■■□□□ 1.86
TPM1-204ENST00000334895 EYA2O00167 538 aa26.64■■□□□ 1.85
TPM1-204ENST00000334895 RAB11FIP3O75154 756 aa26.64■■□□□ 1.85
TPM1-204ENST00000334895 SASH1O94885 1247 aa26.64■■□□□ 1.85
TPM1-204ENST00000334895 G3BP1Q13283 466 aaKnown RBP eCLIP26.64■■□□□ 1.85
TPM1-204ENST00000334895 TAF7LQ5H9L4 462 aa26.64■■□□□ 1.85
TPM1-204ENST00000334895 ANKRD45Q5TZF3 282 aa26.64■■□□□ 1.85
TPM1-204ENST00000334895 FHDC1Q9C0D6 1143 aaPredicted RBP26.64■■□□□ 1.85
TPM1-204ENST00000334895 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.64■■□□□ 1.85
TPM1-204ENST00000334895 SMARCA5O60264 1052 aaPredicted RBP26.63■■□□□ 1.85
TPM1-204ENST00000334895 HSP90AB4PQ58FF6 505 aa26.63■■□□□ 1.85
TPM1-204ENST00000334895 CELF1Q92879 486 aaKnown RBP26.63■■□□□ 1.85
TPM1-204ENST00000334895 CIAO1O76071 339 aa26.62■■□□□ 1.85
TPM1-204ENST00000334895 OS9Q13438 667 aaPredicted RBP26.62■■□□□ 1.85
TPM1-204ENST00000334895 RHPN1Q8TCX5 695 aa26.62■■□□□ 1.85
TPM1-204ENST00000334895 HOXA10P31260 410 aaPredicted RBP26.61■■□□□ 1.85
TPM1-204ENST00000334895 PDE6BP35913 854 aa26.61■■□□□ 1.85
TPM1-204ENST00000334895 CHD1LQ86WJ1 897 aa26.61■■□□□ 1.85
TPM1-204ENST00000334895 CDC5LQ99459 802 aaKnown RBP26.61■■□□□ 1.85
TPM1-204ENST00000334895 LRRCC1Q9C099 1032 aa26.61■■□□□ 1.85
TPM1-204ENST00000334895 FBXO3Q9UK99 471 aa26.61■■□□□ 1.85
TPM1-204ENST00000334895 KIAA1551Q9HCM1 1747 aa26.61■■□□□ 1.85
TPM1-204ENST00000334895 SRGNP10124 158 aa26.61■■□□□ 1.85
TPM1-204ENST00000334895 LDHAL6AQ6ZMR3 332 aa26.61■■□□□ 1.85
TPM1-204ENST00000334895 DDX46Q7L014 1031 aaKnown RBP26.61■■□□□ 1.85
TPM1-204ENST00000334895 RPGRQ92834 1020 aaKnown RBP26.61■■□□□ 1.85
TPM1-204ENST00000334895 LNPKQ9C0E8 428 aa26.61■■□□□ 1.85
TPM1-204ENST00000334895 RIPOR2Q9Y4F9 1068 aa26.61■■□□□ 1.85
TPM1-204ENST00000334895 KIF1BPQ96EK5 621 aa26.6■■□□□ 1.85
TPM1-204ENST00000334895 IL15P40933 162 aaPredicted RBP26.59■■□□□ 1.85
TPM1-204ENST00000334895 ERC1Q8IUD2 1116 aa26.59■■□□□ 1.85
TPM1-204ENST00000334895 IL1RAPL2Q9NP60 686 aa26.59■■□□□ 1.85
TPM1-204ENST00000334895 IGHMBP2P38935 993 aaKnown RBP26.58■■□□□ 1.85
TPM1-204ENST00000334895 ANKRD18AQ8IVF6 992 aa26.58■■□□□ 1.85
TPM1-204ENST00000334895 SYT17Q9BSW7 474 aa26.58■■□□□ 1.85
TPM1-204ENST00000334895 PDE4AP27815 886 aa26.57■■□□□ 1.84
TPM1-204ENST00000334895 RPS8P62241 208 aaKnown RBP26.57■■□□□ 1.84
TPM1-204ENST00000334895 GRAPQ13588 217 aa26.57■■□□□ 1.84
TPM1-204ENST00000334895 GRAPLQ8TC17 118 aaPredicted RBP26.57■■□□□ 1.84
TPM1-204ENST00000334895 RBM17Q96I25 401 aaKnown RBP26.57■■□□□ 1.84
TPM1-204ENST00000334895 CNNM1Q9NRU3 951 aa26.57■■□□□ 1.84
TPM1-204ENST00000334895 A0A1B0GUL6 1792 aa26.57■■□□□ 1.84
TPM1-204ENST00000334895 TFCP2Q12800 502 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms