RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 IGKV5-2P06315 115 aa10.89□□□□□ -0.67
TREM1-202ENST00000334475 HSP90AA1P07900 732 aaKnown RBP10.89□□□□□ -0.67
TREM1-202ENST00000334475 MCM4P33991 863 aa10.89□□□□□ -0.67
TREM1-202ENST00000334475 PLBD2Q8NHP8 589 aa10.89□□□□□ -0.67
TREM1-202ENST00000334475 KIF12Q96FN5 646 aa10.89□□□□□ -0.67
TREM1-202ENST00000334475 MS4A3Q96HJ5 214 aa10.89□□□□□ -0.67
TREM1-202ENST00000334475 SUCLG2Q96I99 432 aa10.89□□□□□ -0.67
TREM1-202ENST00000334475 GBP4Q96PP9 640 aa10.89□□□□□ -0.67
TREM1-202ENST00000334475 IL1RAPL2Q9NP60 686 aa10.89□□□□□ -0.67
TREM1-202ENST00000334475 NHSQ6T4R5 1651 aa10.89□□□□□ -0.67
TREM1-202ENST00000334475 CEP350Q5VT06 3117 aa10.88□□□□□ -0.67
TREM1-202ENST00000334475 C1QTNF8P60827 252 aa10.88□□□□□ -0.67
TREM1-202ENST00000334475 AIMP1Q12904 312 aaKnown RBP10.88□□□□□ -0.67
TREM1-202ENST00000334475 G3BP1Q13283 466 aaKnown RBP eCLIP10.88□□□□□ -0.67
TREM1-202ENST00000334475 RAB3GAP1Q15042 981 aa10.88□□□□□ -0.67
TREM1-202ENST00000334475 RABL6Q3YEC7 729 aaPredicted RBP10.88□□□□□ -0.67
TREM1-202ENST00000334475 RUFY2Q8WXA3 655 aa10.88□□□□□ -0.67
TREM1-202ENST00000334475 RILPL2Q969X0 211 aa10.88□□□□□ -0.67
TREM1-202ENST00000334475 MYD88Q99836 296 aa10.88□□□□□ -0.67
TREM1-202ENST00000334475 CWC22Q9HCG8 908 aaKnown RBP10.88□□□□□ -0.67
TREM1-202ENST00000334475 ECHDC1Q9NTX5 307 aa10.88□□□□□ -0.67
TREM1-202ENST00000334475 USP16Q9Y5T5 823 aa10.88□□□□□ -0.67
TREM1-202ENST00000334475 HIP1O00291 1037 aa10.87□□□□□ -0.67
TREM1-202ENST00000334475 IFIT2P09913 472 aaKnown RBP10.87□□□□□ -0.67
TREM1-202ENST00000334475 MYL6BP14649 208 aa10.87□□□□□ -0.67
TREM1-202ENST00000334475 KCNQ4P56696 695 aa10.87□□□□□ -0.67
TREM1-202ENST00000334475 NUCB2P80303 420 aa10.87□□□□□ -0.67
TREM1-202ENST00000334475 NUTM1Q86Y26 1132 aa10.87□□□□□ -0.67
TREM1-202ENST00000334475 KLHL34Q8N239 644 aa10.87□□□□□ -0.67
TREM1-202ENST00000334475 KAZALD1Q96I82 304 aa10.87□□□□□ -0.67
TREM1-202ENST00000334475 TEX13AQ9BXU3 409 aaPredicted RBP10.87□□□□□ -0.67
TREM1-202ENST00000334475 BICC1Q9H694 974 aaKnown RBP10.87□□□□□ -0.67
TREM1-202ENST00000334475 COPRSQ9NQ92 184 aa10.87□□□□□ -0.67
TREM1-202ENST00000334475 CHD4Q14839 1912 aa10.87□□□□□ -0.67
TREM1-202ENST00000334475 ANKRD36CQ5JPF3 1778 aa10.87□□□□□ -0.67
TREM1-202ENST00000334475 RFX7Q2KHR2 1363 aa10.87□□□□□ -0.67
TREM1-202ENST00000334475 COL24A1Q17RW2 1714 aa10.87□□□□□ -0.67
TREM1-202ENST00000334475 RAD50Q92878 1312 aa10.86□□□□□ -0.67
TREM1-202ENST00000334475 BTAF1O14981 1849 aa10.86□□□□□ -0.67
TREM1-202ENST00000334475 SGSM2O43147 1006 aa10.86□□□□□ -0.67
TREM1-202ENST00000334475 CD2BP2O95400 341 aaKnown RBP10.86□□□□□ -0.67
TREM1-202ENST00000334475 CLEC17AQ6ZS10 378 aa10.86□□□□□ -0.67
TREM1-202ENST00000334475 VSIG10Q8N0Z9 540 aa10.86□□□□□ -0.67
TREM1-202ENST00000334475 EVI5LQ96CN4 794 aa10.86□□□□□ -0.67
TREM1-202ENST00000334475 MTFR1LQ9H019 292 aa10.86□□□□□ -0.67
TREM1-202ENST00000334475 BCL11AQ9H165 835 aa10.86□□□□□ -0.67
TREM1-202ENST00000334475 STK32BQ9NY57 414 aa10.86□□□□□ -0.67
TREM1-202ENST00000334475 CICQ96RK0 1608 aaPredicted RBP10.86□□□□□ -0.67
TREM1-202ENST00000334475 TSHZ3Q63HK5 1081 aa10.85□□□□□ -0.67
TREM1-202ENST00000334475 TICAM2Q86XR7 235 aa10.85□□□□□ -0.67
TREM1-202ENST00000334475 SPRYD3Q8NCJ5 442 aa10.85□□□□□ -0.67
TREM1-202ENST00000334475 NLGN2Q8NFZ4 835 aa10.85□□□□□ -0.67
TREM1-202ENST00000334475 ANO2Q9NQ90 1003 aa10.85□□□□□ -0.67
TREM1-202ENST00000334475 SPEF2Q9C093 1822 aa10.85□□□□□ -0.67
TREM1-202ENST00000334475 SASH1O94885 1247 aa10.84□□□□□ -0.67
TREM1-202ENST00000334475 HSPA4P34932 840 aa10.84□□□□□ -0.67
TREM1-202ENST00000334475 CASP7P55210 303 aa10.84□□□□□ -0.67
TREM1-202ENST00000334475 SKOR2Q2VWA4 1001 aaPredicted RBP10.84□□□□□ -0.67
TREM1-202ENST00000334475 KIAA1211Q6ZU35 1233 aa10.84□□□□□ -0.67
TREM1-202ENST00000334475 ARXQ96QS3 562 aa10.84□□□□□ -0.67
TREM1-202ENST00000334475 CDCA7Q9BWT1 371 aaPredicted RBP10.84□□□□□ -0.67
TREM1-202ENST00000334475 GOLGA6L22H0YM25 854 aa10.83□□□□□ -0.68
TREM1-202ENST00000334475 H7C1W4 665 aa10.83□□□□□ -0.68
TREM1-202ENST00000334475 EXOC5O00471 708 aa10.83□□□□□ -0.68
TREM1-202ENST00000334475 RFX5P48382 616 aaPredicted RBP10.83□□□□□ -0.68
TREM1-202ENST00000334475 AACSQ86V21 672 aa10.83□□□□□ -0.68
TREM1-202ENST00000334475 IFNLR1Q8IU57 520 aaPredicted RBP10.83□□□□□ -0.68
TREM1-202ENST00000334475 CCDC191Q8NCU4 936 aa10.83□□□□□ -0.68
TREM1-202ENST00000334475 TNPO1Q92973 898 aaKnown RBP10.83□□□□□ -0.68
TREM1-202ENST00000334475 INTS4Q96HW7 963 aaKnown RBP10.83□□□□□ -0.68
TREM1-202ENST00000334475 SNRKQ9NRH2 765 aa10.83□□□□□ -0.68
TREM1-202ENST00000334475 DIAPH3Q9NSV4 1193 aa10.83□□□□□ -0.68
TREM1-202ENST00000334475 CWC25Q9NXE8 425 aaPredicted RBP10.83□□□□□ -0.68
TREM1-202ENST00000334475 TMOD3Q9NYL9 352 aa10.83□□□□□ -0.68
TREM1-202ENST00000334475 ISY1Q9ULR0 285 aaKnown RBP10.83□□□□□ -0.68
TREM1-202ENST00000334475 PA2G4Q9UQ80 394 aaKnown RBP10.83□□□□□ -0.68
TREM1-202ENST00000334475 DOT1LQ8TEK3 1739 aa10.82□□□□□ -0.68
TREM1-202ENST00000334475 A0A087WZG4 1122 aa10.82□□□□□ -0.68
TREM1-202ENST00000334475 NBPF26B4DH59 902 aa10.82□□□□□ -0.68
TREM1-202ENST00000334475 MAP3K13O43283 966 aa10.82□□□□□ -0.68
TREM1-202ENST00000334475 YBX3P16989 372 aaKnown RBP eCLIP10.82□□□□□ -0.68
TREM1-202ENST00000334475 CUL4AQ13619 759 aa10.82□□□□□ -0.68
TREM1-202ENST00000334475 L1TD1Q5T7N2 865 aaKnown RBP10.82□□□□□ -0.68
TREM1-202ENST00000334475 NBPF10Q6P3W6 841 aaKnown RBP10.82□□□□□ -0.68
TREM1-202ENST00000334475 NBPF15Q8N660 670 aa10.82□□□□□ -0.68
TREM1-202ENST00000334475 LSG1Q9H089 658 aaKnown RBP10.82□□□□□ -0.68
TREM1-202ENST00000334475 GPR108Q9NPR9 543 aa10.82□□□□□ -0.68
TREM1-202ENST00000334475 ATG3Q9NT62 314 aa10.82□□□□□ -0.68
TREM1-202ENST00000334475 PNPLA7Q6ZV29 1317 aa10.82□□□□□ -0.68
TREM1-202ENST00000334475 CYP2E1P05181 493 aaPredicted RBP10.81□□□□□ -0.68
TREM1-202ENST00000334475 NEK4P51957 841 aa10.81□□□□□ -0.68
TREM1-202ENST00000334475 PTPN12Q05209 780 aaKnown RBP10.81□□□□□ -0.68
TREM1-202ENST00000334475 EAF2Q96CJ1 260 aaPredicted RBP10.81□□□□□ -0.68
TREM1-202ENST00000334475 MYH3P11055 1940 aa10.81□□□□□ -0.68
TREM1-202ENST00000334475 TRAK2O60296 914 aa10.8□□□□□ -0.68
TREM1-202ENST00000334475 TRIM28Q13263 835 aaKnown RBP10.8□□□□□ -0.68
TREM1-202ENST00000334475 EPHA10Q5JZY3 1008 aa10.8□□□□□ -0.68
TREM1-202ENST00000334475 UBE3BQ7Z3V4 1068 aa10.8□□□□□ -0.68
TREM1-202ENST00000334475 DDX54Q8TDD1 881 aaKnown RBP10.8□□□□□ -0.68
TREM1-202ENST00000334475 KCNB2Q92953 911 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms