RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 TSR3Q9UJK0 312 aaKnown RBP10.77□□□□□ -0.69
LSAMP-201ENST00000333617 PNMA3Q9UL41 463 aa10.77□□□□□ -0.69
LSAMP-201ENST00000333617 PNMA6EA0A0J9YXQ4 647 aa10.76□□□□□ -0.69
LSAMP-201ENST00000333617 EIF5BO60841 1220 aaKnown RBP10.76□□□□□ -0.69
LSAMP-201ENST00000333617 CDC45O75419 566 aa10.76□□□□□ -0.69
LSAMP-201ENST00000333617 GSPT1P15170 499 aaKnown RBP10.76□□□□□ -0.69
LSAMP-201ENST00000333617 SLC39A6Q13433 755 aa10.76□□□□□ -0.69
LSAMP-201ENST00000333617 KSR2Q6VAB6 950 aa10.76□□□□□ -0.69
LSAMP-201ENST00000333617 NPDC1Q9NQX5 325 aaPredicted RBP10.76□□□□□ -0.69
LSAMP-201ENST00000333617 EXOC6BQ9Y2D4 811 aa10.76□□□□□ -0.69
LSAMP-201ENST00000333617 COL14A1Q05707 1796 aaKnown RBP10.76□□□□□ -0.69
LSAMP-201ENST00000333617 WNK3Q9BYP7 1800 aa10.76□□□□□ -0.69
LSAMP-201ENST00000333617 DDX58O95786 925 aaKnown RBP10.75□□□□□ -0.69
LSAMP-201ENST00000333617 PROSER3Q2NL68 480 aa10.75□□□□□ -0.69
LSAMP-201ENST00000333617 TBC1D9Q6ZT07 1266 aa10.75□□□□□ -0.69
LSAMP-201ENST00000333617 TTC5Q8N0Z6 440 aa10.75□□□□□ -0.69
LSAMP-201ENST00000333617 OTUD7AQ8TE49 926 aaPredicted RBP10.75□□□□□ -0.69
LSAMP-201ENST00000333617 CARD10Q9BWT7 1032 aa10.75□□□□□ -0.69
LSAMP-201ENST00000333617 LRRCC1Q9C099 1032 aa10.75□□□□□ -0.69
LSAMP-201ENST00000333617 HPS5Q9UPZ3 1129 aa10.75□□□□□ -0.69
LSAMP-201ENST00000333617 MAP3K2Q9Y2U5 619 aa10.75□□□□□ -0.69
LSAMP-201ENST00000333617 PCDH11XQ9BZA7 1347 aa10.75□□□□□ -0.69
LSAMP-201ENST00000333617 PCDH11YQ9BZA8 1340 aa10.75□□□□□ -0.69
LSAMP-201ENST00000333617 IBTKQ9P2D0 1353 aaPredicted RBP10.75□□□□□ -0.69
LSAMP-201ENST00000333617 GLI3P10071 1580 aa10.75□□□□□ -0.69
LSAMP-201ENST00000333617 ALDH1L1O75891 902 aa10.74□□□□□ -0.69
LSAMP-201ENST00000333617 RBM25P49756 843 aaKnown RBP10.74□□□□□ -0.69
LSAMP-201ENST00000333617 CABP4P57796 275 aa10.74□□□□□ -0.69
LSAMP-201ENST00000333617 ZCRB1Q8TBF4 217 aaKnown RBP10.74□□□□□ -0.69
LSAMP-201ENST00000333617 COL22A1Q8NFW1 1626 aaPredicted RBP10.74□□□□□ -0.69
LSAMP-201ENST00000333617 TOGARAM1Q9Y4F4 1720 aa10.74□□□□□ -0.69
LSAMP-201ENST00000333617 SNRPA1P09661 255 aaKnown RBP10.73□□□□□ -0.69
LSAMP-201ENST00000333617 IL2RBP14784 551 aa10.73□□□□□ -0.69
LSAMP-201ENST00000333617 EVA1CP58658 441 aa10.73□□□□□ -0.69
LSAMP-201ENST00000333617 RTL5Q5HYW3 569 aaPredicted RBP10.73□□□□□ -0.69
LSAMP-201ENST00000333617 NUDT18Q6ZVK8 323 aa10.73□□□□□ -0.69
LSAMP-201ENST00000333617 PPP1R42Q7Z4L9 355 aa10.73□□□□□ -0.69
LSAMP-201ENST00000333617 TTC13Q8NBP0 860 aa10.73□□□□□ -0.69
LSAMP-201ENST00000333617 SSH3Q8TE77 659 aa10.73□□□□□ -0.69
LSAMP-201ENST00000333617 ZNF496Q96IT1 587 aaPredicted RBP10.73□□□□□ -0.69
LSAMP-201ENST00000333617 FMNL2Q96PY5 1086 aa10.73□□□□□ -0.69
LSAMP-201ENST00000333617 OSBPL3Q9H4L5 887 aa10.73□□□□□ -0.69
LSAMP-201ENST00000333617 HDAC5Q9UQL6 1122 aa10.73□□□□□ -0.69
LSAMP-201ENST00000333617 NUP188Q5SRE5 1749 aa10.73□□□□□ -0.69
LSAMP-201ENST00000333617 AHDC1Q5TGY3 1603 aaPredicted RBP10.73□□□□□ -0.69
LSAMP-201ENST00000333617 C3orf80F5H4A9 247 aa10.73□□□□□ -0.69
LSAMP-201ENST00000333617 NBPF7P0C2Y1 421 aaPredicted RBP10.73□□□□□ -0.69
LSAMP-201ENST00000333617 PADI6Q6TGC4 694 aa10.73□□□□□ -0.69
LSAMP-201ENST00000333617 STRN4Q9NRL3 753 aa10.73□□□□□ -0.69
LSAMP-201ENST00000333617 C9orf78Q9NZ63 289 aaPredicted RBP10.73□□□□□ -0.69
LSAMP-201ENST00000333617 PLCH1Q4KWH8 1693 aa10.72□□□□□ -0.69
LSAMP-201ENST00000333617 SRGAP3O43295 1099 aa10.72□□□□□ -0.69
LSAMP-201ENST00000333617 RAB11FIP3O75154 756 aa10.72□□□□□ -0.69
LSAMP-201ENST00000333617 MYL6BP14649 208 aa10.72□□□□□ -0.69
LSAMP-201ENST00000333617 SDSP20132 328 aa10.72□□□□□ -0.69
LSAMP-201ENST00000333617 PDE1AP54750 535 aa10.72□□□□□ -0.69
LSAMP-201ENST00000333617 AIMP1Q12904 312 aaKnown RBP10.72□□□□□ -0.69
LSAMP-201ENST00000333617 CASC1Q6TDU7 716 aa10.72□□□□□ -0.69
LSAMP-201ENST00000333617 SAMD7Q7Z3H4 446 aa10.72□□□□□ -0.69
LSAMP-201ENST00000333617 LINS1Q8NG48 757 aa10.72□□□□□ -0.69
LSAMP-201ENST00000333617 TBC1D2Q9BYX2 928 aa10.72□□□□□ -0.69
LSAMP-201ENST00000333617 PHLPP1O60346 1717 aa10.72□□□□□ -0.69
LSAMP-201ENST00000333617 ERVV-2B6SEH9 535 aa10.71□□□□□ -0.69
LSAMP-201ENST00000333617 ITGBL1O95965 494 aaPredicted RBP10.71□□□□□ -0.69
LSAMP-201ENST00000333617 PPP4CP60510 307 aa10.71□□□□□ -0.69
LSAMP-201ENST00000333617 LARP1Q6PKG0 1096 aaKnown RBP10.71□□□□□ -0.69
LSAMP-201ENST00000333617 RIC3Q7Z5B4 369 aa10.71□□□□□ -0.69
LSAMP-201ENST00000333617 SALL3Q9BXA9 1300 aa10.7□□□□□ -0.7
LSAMP-201ENST00000333617 COL16A1Q07092 1604 aaPredicted RBP10.7□□□□□ -0.7
LSAMP-201ENST00000333617 SURF6O75683 361 aaKnown RBP10.7□□□□□ -0.7
LSAMP-201ENST00000333617 MX1P20591 662 aa10.7□□□□□ -0.7
LSAMP-201ENST00000333617 NEXNQ0ZGT2 675 aa10.7□□□□□ -0.7
LSAMP-201ENST00000333617 USP35Q9P2H5 1018 aa10.7□□□□□ -0.7
LSAMP-201ENST00000333617 USP16Q9Y5T5 823 aa10.7□□□□□ -0.7
LSAMP-201ENST00000333617 GRM8O00222 908 aa10.69□□□□□ -0.7
LSAMP-201ENST00000333617 SEMA3EO15041 775 aa10.69□□□□□ -0.7
LSAMP-201ENST00000333617 MTX1Q13505 466 aa10.69□□□□□ -0.7
LSAMP-201ENST00000333617 CWF19L2Q2TBE0 894 aaKnown RBP10.69□□□□□ -0.7
LSAMP-201ENST00000333617 HSP90AB4PQ58FF6 505 aa10.69□□□□□ -0.7
LSAMP-201ENST00000333617 XAGE3Q8WTP9 111 aa10.69□□□□□ -0.7
LSAMP-201ENST00000333617 KCPQ6ZWJ8 1503 aa10.69□□□□□ -0.7
LSAMP-201ENST00000333617 UTYO14607 1347 aa10.69□□□□□ -0.7
LSAMP-201ENST00000333617 AOX1Q06278 1338 aa10.69□□□□□ -0.7
LSAMP-201ENST00000333617 COPS6Q7L5N1 327 aa10.69□□□□□ -0.7
LSAMP-201ENST00000333617 HSCBQ8IWL3 235 aa10.69□□□□□ -0.7
LSAMP-201ENST00000333617 DDX54Q8TDD1 881 aaKnown RBP10.69□□□□□ -0.7
LSAMP-201ENST00000333617 KIF1BPQ96EK5 621 aa10.69□□□□□ -0.7
LSAMP-201ENST00000333617 STAP2Q9UGK3 403 aa10.69□□□□□ -0.7
LSAMP-201ENST00000333617 ERBB4Q15303 1308 aa10.68□□□□□ -0.7
LSAMP-201ENST00000333617 A0A0G2JS52 829 aa10.68□□□□□ -0.7
LSAMP-201ENST00000333617 PTGDRQ13258 359 aa10.68□□□□□ -0.7
LSAMP-201ENST00000333617 LRP10Q7Z4F1 713 aa10.68□□□□□ -0.7
LSAMP-201ENST00000333617 RHPN1Q8TCX5 695 aa10.68□□□□□ -0.7
LSAMP-201ENST00000333617 METTL22Q9BUU2 404 aaPredicted RBP10.68□□□□□ -0.7
LSAMP-201ENST00000333617 IL1RAPL2Q9NP60 686 aa10.68□□□□□ -0.7
LSAMP-201ENST00000333617 BTG4Q9NY30 223 aa10.68□□□□□ -0.7
LSAMP-201ENST00000333617 LTBP4Q8N2S1 1624 aa10.68□□□□□ -0.7
LSAMP-201ENST00000333617 NEURL1BA8MQ27 555 aa10.67□□□□□ -0.7
LSAMP-201ENST00000333617 IGKV5-2P06315 115 aa10.67□□□□□ -0.7
LSAMP-201ENST00000333617 OS9Q13438 667 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms