RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 TNNQ9UQP3 1299 aa25.86■■□□□ 1.73
MRPL40-201ENST00000333130 CTSWP56202 376 aa25.85■■□□□ 1.73
MRPL40-201ENST00000333130 ARHGAP27Q6ZUM4 889 aa25.84■■□□□ 1.73
MRPL40-201ENST00000333130 FTSJ3Q8IY81 847 aaKnown RBP25.84■■□□□ 1.73
MRPL40-201ENST00000333130 C21orf2O43822 256 aa25.83■■□□□ 1.73
MRPL40-201ENST00000333130 INTS3Q68E01 1043 aaKnown RBP25.83■■□□□ 1.73
MRPL40-201ENST00000333130 PLA2G12BQ9BX93 195 aa25.83■■□□□ 1.73
MRPL40-201ENST00000333130 ZNF219Q9P2Y4 722 aaPredicted RBP25.83■■□□□ 1.73
MRPL40-201ENST00000333130 PPEF1O14829 653 aaPredicted RBP25.82■■□□□ 1.72
MRPL40-201ENST00000333130 GRAPQ13588 217 aa25.82■■□□□ 1.72
MRPL40-201ENST00000333130 TMC4Q7Z404 712 aa25.82■■□□□ 1.72
MRPL40-201ENST00000333130 GRAPLQ8TC17 118 aaPredicted RBP25.82■■□□□ 1.72
MRPL40-201ENST00000333130 TAF1P21675 1872 aa25.82■■□□□ 1.72
MRPL40-201ENST00000333130 FER1L6Q2WGJ9 1857 aa25.82■■□□□ 1.72
MRPL40-201ENST00000333130 BBOX1O75936 387 aa25.82■■□□□ 1.72
MRPL40-201ENST00000333130 MS4A1P11836 297 aa25.82■■□□□ 1.72
MRPL40-201ENST00000333130 CASP7P55210 303 aa25.82■■□□□ 1.72
MRPL40-201ENST00000333130 CCDC93Q567U6 631 aa25.82■■□□□ 1.72
MRPL40-201ENST00000333130 CC2D2BQ6DHV5 1058 aa25.82■■□□□ 1.72
MRPL40-201ENST00000333130 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.82■■□□□ 1.72
MRPL40-201ENST00000333130 HDAC5Q9UQL6 1122 aa25.82■■□□□ 1.72
MRPL40-201ENST00000333130 RLBP1P12271 317 aa25.81■■□□□ 1.72
MRPL40-201ENST00000333130 GRIPAP1Q4V328 841 aa25.81■■□□□ 1.72
MRPL40-201ENST00000333130 DZIP1LQ8IYY4 767 aaKnown RBP25.81■■□□□ 1.72
MRPL40-201ENST00000333130 CLUAP1Q96AJ1 413 aa25.81■■□□□ 1.72
MRPL40-201ENST00000333130 PLIN1O60240 522 aa25.8■■□□□ 1.72
MRPL40-201ENST00000333130 CDC5LQ99459 802 aaKnown RBP25.8■■□□□ 1.72
MRPL40-201ENST00000333130 UTYO14607 1347 aa25.8■■□□□ 1.72
MRPL40-201ENST00000333130 RRP1P56182 461 aaKnown RBP25.79■■□□□ 1.72
MRPL40-201ENST00000333130 TTLL11Q8NHH1 800 aa25.79■■□□□ 1.72
MRPL40-201ENST00000333130 RTL9Q8NET4 1388 aa25.79■■□□□ 1.72
MRPL40-201ENST00000333130 RTKN2Q8IZC4 609 aa25.78■■□□□ 1.72
MRPL40-201ENST00000333130 TMEM57Q8N5G2 664 aa25.78■■□□□ 1.72
MRPL40-201ENST00000333130 CCDC85AQ96PX6 553 aaPredicted RBP25.78■■□□□ 1.72
MRPL40-201ENST00000333130 SPEF2Q9C093 1822 aa25.77■■□□□ 1.72
MRPL40-201ENST00000333130 NBPF7P0C2Y1 421 aaPredicted RBP25.77■■□□□ 1.72
MRPL40-201ENST00000333130 PDE3AQ14432 1141 aa25.77■■□□□ 1.72
MRPL40-201ENST00000333130 CHMP3Q9Y3E7 222 aa25.77■■□□□ 1.72
MRPL40-201ENST00000333130 CCDC88AQ3V6T2 1871 aa25.76■■□□□ 1.71
MRPL40-201ENST00000333130 UBTFL1P0CB47 393 aaPredicted RBP25.76■■□□□ 1.71
MRPL40-201ENST00000333130 USP44Q9H0E7 712 aa25.76■■□□□ 1.71
MRPL40-201ENST00000333130 ATP6V0A2Q9Y487 856 aa25.76■■□□□ 1.71
MRPL40-201ENST00000333130 SBF1O95248 1867 aa25.76■■□□□ 1.71
MRPL40-201ENST00000333130 ANKRD18AQ8IVF6 992 aa25.75■■□□□ 1.71
MRPL40-201ENST00000333130 PANK1Q8TE04 598 aa25.75■■□□□ 1.71
MRPL40-201ENST00000333130 C7orf43Q8WVR3 580 aa25.75■■□□□ 1.71
MRPL40-201ENST00000333130 TAOK3Q9H2K8 898 aa25.75■■□□□ 1.71
MRPL40-201ENST00000333130 GREM2Q9H772 168 aa25.75■■□□□ 1.71
MRPL40-201ENST00000333130 LRRC37AA6NMS7 1700 aa25.75■■□□□ 1.71
MRPL40-201ENST00000333130 GNAI3P08754 354 aa25.74■■□□□ 1.71
MRPL40-201ENST00000333130 RPS8P62241 208 aaKnown RBP25.74■■□□□ 1.71
MRPL40-201ENST00000333130 LTBP3Q9NS15 1303 aa25.73■■□□□ 1.71
MRPL40-201ENST00000333130 CSF1RP07333 972 aa25.73■■□□□ 1.71
MRPL40-201ENST00000333130 IFIT5Q13325 482 aaKnown RBP25.73■■□□□ 1.71
MRPL40-201ENST00000333130 SP8Q8IXZ3 490 aa25.73■■□□□ 1.71
MRPL40-201ENST00000333130 CELF1Q92879 486 aaKnown RBP25.73■■□□□ 1.71
MRPL40-201ENST00000333130 SEC31BQ9NQW1 1179 aa25.73■■□□□ 1.71
MRPL40-201ENST00000333130 ANKRD18BA2A2Z9 1011 aa25.72■■□□□ 1.71
MRPL40-201ENST00000333130 ITGA6P23229 1130 aa25.72■■□□□ 1.71
MRPL40-201ENST00000333130 IGHMBP2P38935 993 aaKnown RBP25.72■■□□□ 1.71
MRPL40-201ENST00000333130 FOXO4P98177 505 aa25.72■■□□□ 1.71
MRPL40-201ENST00000333130 CCDC57Q2TAC2 916 aa25.72■■□□□ 1.71
MRPL40-201ENST00000333130 FAM161AQ3B820 660 aa25.72■■□□□ 1.71
MRPL40-201ENST00000333130 C20orf194Q5TEA3 1177 aa25.72■■□□□ 1.71
MRPL40-201ENST00000333130 LMBR1LQ6UX01 489 aa25.72■■□□□ 1.71
MRPL40-201ENST00000333130 SUCLG2Q96I99 432 aa25.72■■□□□ 1.71
MRPL40-201ENST00000333130 ITPRIPQ8IWB1 547 aa25.71■■□□□ 1.71
MRPL40-201ENST00000333130 DICER1Q9UPY3 1922 aaKnown RBP25.71■■□□□ 1.71
MRPL40-201ENST00000333130 NFKBIEO00221 500 aa25.7■■□□□ 1.71
MRPL40-201ENST00000333130 LMNB1P20700 586 aa25.7■■□□□ 1.71
MRPL40-201ENST00000333130 FKBP4Q02790 459 aaKnown RBP eCLIP25.7■■□□□ 1.71
MRPL40-201ENST00000333130 RASSF7Q02833 373 aa25.7■■□□□ 1.71
MRPL40-201ENST00000333130 TAF7LQ5H9L4 462 aa25.7■■□□□ 1.71
MRPL40-201ENST00000333130 BICC1Q9H694 974 aaKnown RBP25.7■■□□□ 1.71
MRPL40-201ENST00000333130 MVPQ14764 893 aaKnown RBP25.69■■□□□ 1.7
MRPL40-201ENST00000333130 PSMD1Q99460 953 aa25.69■■□□□ 1.7
MRPL40-201ENST00000333130 MPHOSPH8Q99549 860 aa25.69■■□□□ 1.7
MRPL40-201ENST00000333130 MEIS3Q99687 375 aa25.69■■□□□ 1.7
MRPL40-201ENST00000333130 OLFM4Q6UX06 510 aa25.69■■□□□ 1.7
MRPL40-201ENST00000333130 DPP8Q6V1X1 898 aaPredicted RBP25.69■■□□□ 1.7
MRPL40-201ENST00000333130 SUPT20HQ8NEM7 779 aa25.69■■□□□ 1.7
MRPL40-201ENST00000333130 SUPT16HQ9Y5B9 1047 aaKnown RBP25.69■■□□□ 1.7
MRPL40-201ENST00000333130 EPHA10Q5JZY3 1008 aa25.68■■□□□ 1.7
MRPL40-201ENST00000333130 MPNDQ8N594 471 aa25.68■■□□□ 1.7
MRPL40-201ENST00000333130 KAZALD1Q96I82 304 aa25.68■■□□□ 1.7
MRPL40-201ENST00000333130 RNF181Q9P0P0 153 aa25.68■■□□□ 1.7
MRPL40-201ENST00000333130 TIAM2Q8IVF5 1701 aa25.67■■□□□ 1.7
MRPL40-201ENST00000333130 YY1P25490 414 aa25.67■■□□□ 1.7
MRPL40-201ENST00000333130 RABL6Q3YEC7 729 aaPredicted RBP25.67■■□□□ 1.7
MRPL40-201ENST00000333130 BSDC1Q9NW68 430 aaPredicted RBP25.67■■□□□ 1.7
MRPL40-201ENST00000333130 ZBTB7BO15156 539 aaPredicted RBP25.66■■□□□ 1.7
MRPL40-201ENST00000333130 CENPBP07199 599 aaPredicted RBP25.66■■□□□ 1.7
MRPL40-201ENST00000333130 C9orf131Q5VYM1 1079 aa25.66■■□□□ 1.7
MRPL40-201ENST00000333130 COG6Q9Y2V7 657 aa25.66■■□□□ 1.7
MRPL40-201ENST00000333130 COL4A1P02462 1669 aa25.66■■□□□ 1.7
MRPL40-201ENST00000333130 SNED1Q8TER0 1413 aa25.65■■□□□ 1.7
MRPL40-201ENST00000333130 CHMP4BQ9H444 224 aaKnown RBP25.65■■□□□ 1.7
MRPL40-201ENST00000333130 ANKIB1Q9P2G1 1089 aa25.65■■□□□ 1.7
MRPL40-201ENST00000333130 DDX19BQ9UMR2 479 aa25.65■■□□□ 1.7
MRPL40-201ENST00000333130 LRRFIP2Q9Y608 721 aaKnown RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms