RNA–Protein interactions for RNA: ENST00000333001.10

CMTM1-203, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-203ENST00000333001 PCCAP05165 728 aaPredicted RBP15.68■□□□□ 0.1
CMTM1-203ENST00000333001 EXOSC9Q06265 439 aaKnown RBP15.68■□□□□ 0.1
CMTM1-203ENST00000333001 LAMB2P55268 1798 aa15.67■□□□□ 0.1
CMTM1-203ENST00000333001 TCERG1O14776 1098 aaKnown RBP15.67■□□□□ 0.1
CMTM1-203ENST00000333001 HTRA3P83110 453 aa15.67■□□□□ 0.1
CMTM1-203ENST00000333001 JMYQ8N9B5 988 aa15.67■□□□□ 0.1
CMTM1-203ENST00000333001 IQCA1LA6NCM1 817 aa15.66■□□□□ 0.1
CMTM1-203ENST00000333001 FZD9O00144 591 aa15.66■□□□□ 0.1
CMTM1-203ENST00000333001 PDE8AO60658 829 aa15.66■□□□□ 0.1
CMTM1-203ENST00000333001 FLIIQ13045 1269 aa15.66■□□□□ 0.1
CMTM1-203ENST00000333001 RTL5Q5HYW3 569 aaPredicted RBP15.66■□□□□ 0.1
CMTM1-203ENST00000333001 SNED1Q8TER0 1413 aa15.66■□□□□ 0.1
CMTM1-203ENST00000333001 DDNO94850 711 aaPredicted RBP15.65■□□□□ 0.1
CMTM1-203ENST00000333001 EIF6P56537 245 aaKnown RBP15.65■□□□□ 0.1
CMTM1-203ENST00000333001 FKBP5Q13451 457 aaPredicted RBP15.65■□□□□ 0.1
CMTM1-203ENST00000333001 CCDC152Q4G0S7 254 aa15.65■□□□□ 0.1
CMTM1-203ENST00000333001 DPP8Q6V1X1 898 aaPredicted RBP15.65■□□□□ 0.1
CMTM1-203ENST00000333001 LARGE2Q8N3Y3 721 aa15.65■□□□□ 0.1
CMTM1-203ENST00000333001 MPNDQ8N594 471 aa15.65■□□□□ 0.1
CMTM1-203ENST00000333001 RTFDC1Q9BY42 306 aaPredicted RBP15.65■□□□□ 0.1
CMTM1-203ENST00000333001 DDX60Q8IY21 1712 aaKnown RBP15.65■□□□□ 0.1
CMTM1-203ENST00000333001 ZNF521Q96K83 1311 aa15.65■□□□□ 0.1
CMTM1-203ENST00000333001 CDHR2Q9BYE9 1310 aa15.65■□□□□ 0.1
CMTM1-203ENST00000333001 E9PSI1 815 aa15.64■□□□□ 0.09
CMTM1-203ENST00000333001 G2E3Q7L622 706 aa15.64■□□□□ 0.09
CMTM1-203ENST00000333001 L3MBTL3Q96JM7 780 aaPredicted RBP15.64■□□□□ 0.09
CMTM1-203ENST00000333001 SPINK5Q9NQ38 1064 aaPredicted RBP15.64■□□□□ 0.09
CMTM1-203ENST00000333001 PPIP5K2O43314 1243 aa15.63■□□□□ 0.09
CMTM1-203ENST00000333001 RPS8P62241 208 aaKnown RBP15.63■□□□□ 0.09
CMTM1-203ENST00000333001 NIM1KQ8IY84 436 aa15.63■□□□□ 0.09
CMTM1-203ENST00000333001 GPC2Q8N158 579 aa15.63■□□□□ 0.09
CMTM1-203ENST00000333001 DNAAF4Q8WXU2 420 aa15.63■□□□□ 0.09
CMTM1-203ENST00000333001 ZNF428Q96B54 188 aa15.63■□□□□ 0.09
CMTM1-203ENST00000333001 NEURL1BA8MQ27 555 aa15.62■□□□□ 0.09
CMTM1-203ENST00000333001 POTECB2RU33 542 aa15.62■□□□□ 0.09
CMTM1-203ENST00000333001 IGKV5-2P06315 115 aa15.62■□□□□ 0.09
CMTM1-203ENST00000333001 TNS4Q8IZW8 715 aa15.62■□□□□ 0.09
CMTM1-203ENST00000333001 LINS1Q8NG48 757 aa15.62■□□□□ 0.09
CMTM1-203ENST00000333001 SCN4AP35499 1836 aa15.61■□□□□ 0.09
CMTM1-203ENST00000333001 CELF1Q92879 486 aaKnown RBP15.61■□□□□ 0.09
CMTM1-203ENST00000333001 H7C1W4 665 aa15.6■□□□□ 0.09
CMTM1-203ENST00000333001 CWF19L2Q2TBE0 894 aaKnown RBP15.6■□□□□ 0.09
CMTM1-203ENST00000333001 COL13A1Q5TAT6 717 aaPredicted RBP15.6■□□□□ 0.09
CMTM1-203ENST00000333001 HACL1Q9UJ83 578 aa15.6■□□□□ 0.09
CMTM1-203ENST00000333001 ZNRF3Q9ULT6 936 aa15.6■□□□□ 0.09
CMTM1-203ENST00000333001 TAF1P21675 1872 aa15.6■□□□□ 0.09
CMTM1-203ENST00000333001 ZNF541Q9H0D2 1346 aa15.6■□□□□ 0.09
CMTM1-203ENST00000333001 CAPN15O75808 1086 aa15.59■□□□□ 0.09
CMTM1-203ENST00000333001 CTSWP56202 376 aa15.59■□□□□ 0.09
CMTM1-203ENST00000333001 KIAA2012Q0VF49 1180 aa15.59■□□□□ 0.09
CMTM1-203ENST00000333001 GCKRQ14397 625 aa15.59■□□□□ 0.09
CMTM1-203ENST00000333001 AOC3Q16853 763 aa15.59■□□□□ 0.09
CMTM1-203ENST00000333001 PNMA8AQ86V59 439 aaPredicted RBP15.59■□□□□ 0.09
CMTM1-203ENST00000333001 CDC5LQ99459 802 aaKnown RBP15.59■□□□□ 0.09
CMTM1-203ENST00000333001 EYA3Q99504 573 aa15.59■□□□□ 0.09
CMTM1-203ENST00000333001 NSFL1CQ9UNZ2 370 aaKnown RBP15.59■□□□□ 0.09
CMTM1-203ENST00000333001 LMOD1P29536 600 aaPredicted RBP15.58■□□□□ 0.08
CMTM1-203ENST00000333001 SLFN5Q08AF3 891 aa15.58■□□□□ 0.08
CMTM1-203ENST00000333001 ANKRD18AQ8IVF6 992 aa15.58■□□□□ 0.08
CMTM1-203ENST00000333001 PLA2G12BQ9BX93 195 aa15.58■□□□□ 0.08
CMTM1-203ENST00000333001 TAF1DQ9H5J8 278 aaPredicted RBP15.58■□□□□ 0.08
CMTM1-203ENST00000333001 MYH3P11055 1940 aa15.57■□□□□ 0.08
CMTM1-203ENST00000333001 TNIP1Q15025 636 aa15.57■□□□□ 0.08
CMTM1-203ENST00000333001 WASHC4Q2M389 1173 aa15.57■□□□□ 0.08
CMTM1-203ENST00000333001 CHADLQ6NUI6 762 aa15.57■□□□□ 0.08
CMTM1-203ENST00000333001 UBE3BQ7Z3V4 1068 aa15.57■□□□□ 0.08
CMTM1-203ENST00000333001 LDHDQ86WU2 507 aa15.57■□□□□ 0.08
CMTM1-203ENST00000333001 TTLL11Q8NHH1 800 aa15.57■□□□□ 0.08
CMTM1-203ENST00000333001 JARID2Q92833 1246 aaPredicted RBP15.57■□□□□ 0.08
CMTM1-203ENST00000333001 SEC31BQ9NQW1 1179 aa15.57■□□□□ 0.08
CMTM1-203ENST00000333001 PODXL2Q9NZ53 605 aa15.57■□□□□ 0.08
CMTM1-203ENST00000333001 GJA3Q9Y6H8 435 aa15.57■□□□□ 0.08
CMTM1-203ENST00000333001 LRRC37AA6NMS7 1700 aa15.57■□□□□ 0.08
CMTM1-203ENST00000333001 C6orf229H3BNL8 230 aa15.56■□□□□ 0.08
CMTM1-203ENST00000333001 HSPA1AP0DMV8 641 aaKnown RBP15.56■□□□□ 0.08
CMTM1-203ENST00000333001 HSPA1BP0DMV9 641 aaKnown RBP15.56■□□□□ 0.08
CMTM1-203ENST00000333001 EPHX2P34913 555 aa15.56■□□□□ 0.08
CMTM1-203ENST00000333001 ANKIB1Q9P2G1 1089 aa15.56■□□□□ 0.08
CMTM1-203ENST00000333001 RTL9Q8NET4 1388 aa15.56■□□□□ 0.08
CMTM1-203ENST00000333001 CT47B1P0C2W7 299 aaPredicted RBP15.55■□□□□ 0.08
CMTM1-203ENST00000333001 GPSM2P81274 684 aa15.55■□□□□ 0.08
CMTM1-203ENST00000333001 BEND3Q5T5X7 828 aa15.55■□□□□ 0.08
CMTM1-203ENST00000333001 DIEXFQ68CQ4 756 aaKnown RBP15.55■□□□□ 0.08
CMTM1-203ENST00000333001 F6X3S4 739 aa15.54■□□□□ 0.08
CMTM1-203ENST00000333001 ALDH1L1O75891 902 aa15.54■□□□□ 0.08
CMTM1-203ENST00000333001 CXCL9Q07325 125 aa15.54■□□□□ 0.08
CMTM1-203ENST00000333001 CIAPIN1Q6FI81 312 aa15.54■□□□□ 0.08
CMTM1-203ENST00000333001 SLC51AQ86UW1 340 aa15.54■□□□□ 0.08
CMTM1-203ENST00000333001 TBC1D16Q8TBP0 767 aa15.54■□□□□ 0.08
CMTM1-203ENST00000333001 CCDC85AQ96PX6 553 aaPredicted RBP15.54■□□□□ 0.08
CMTM1-203ENST00000333001 ZC3H12CQ9C0D7 883 aaKnown RBP15.54■□□□□ 0.08
CMTM1-203ENST00000333001 BSDC1Q9NW68 430 aaPredicted RBP15.54■□□□□ 0.08
CMTM1-203ENST00000333001 POLLQ9UGP5 575 aa15.54■□□□□ 0.08
CMTM1-203ENST00000333001 GGA1Q9UJY5 639 aa15.54■□□□□ 0.08
CMTM1-203ENST00000333001 COL4A5P29400 1685 aa15.54■□□□□ 0.08
CMTM1-203ENST00000333001 PTPRCP08575 1304 aa15.53■□□□□ 0.08
CMTM1-203ENST00000333001 XDHP47989 1333 aa15.53■□□□□ 0.08
CMTM1-203ENST00000333001 CSF1RP07333 972 aa15.53■□□□□ 0.08
CMTM1-203ENST00000333001 IGHMBP2P38935 993 aaKnown RBP15.53■□□□□ 0.08
CMTM1-203ENST00000333001 CASP7P55210 303 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms