RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 VPS53Q5VIR6 699 aa21.8■■□□□ 1.08
LYSMD4-201ENST00000332728 ACSBG1Q96GR2 724 aa21.8■■□□□ 1.08
LYSMD4-201ENST00000332728 TPCN1Q9ULQ1 816 aa21.8■■□□□ 1.08
LYSMD4-201ENST00000332728 NAP1L2Q9ULW6 460 aaPredicted RBP21.8■■□□□ 1.08
LYSMD4-201ENST00000332728 DCCP43146 1447 aa21.8■■□□□ 1.08
LYSMD4-201ENST00000332728 FKBP4Q02790 459 aaKnown RBP eCLIP21.8■■□□□ 1.08
LYSMD4-201ENST00000332728 HLFQ16534 295 aa21.8■■□□□ 1.08
LYSMD4-201ENST00000332728 COL15A1P39059 1388 aa21.8■■□□□ 1.08
LYSMD4-201ENST00000332728 SYT1P21579 422 aa21.79■■□□□ 1.08
LYSMD4-201ENST00000332728 PI16Q6UXB8 463 aa21.79■■□□□ 1.08
LYSMD4-201ENST00000332728 TBC1D2BQ9UPU7 963 aa21.79■■□□□ 1.08
LYSMD4-201ENST00000332728 NUTM2BA6NNL0 878 aaPredicted RBP21.79■■□□□ 1.08
LYSMD4-201ENST00000332728 NUTM2EB1AL46 878 aaPredicted RBP21.79■■□□□ 1.08
LYSMD4-201ENST00000332728 CHST3Q7LGC8 479 aa21.79■■□□□ 1.08
LYSMD4-201ENST00000332728 USP48Q86UV5 1035 aa21.79■■□□□ 1.08
LYSMD4-201ENST00000332728 NUTM2AQ8IVF1 878 aaPredicted RBP21.79■■□□□ 1.08
LYSMD4-201ENST00000332728 ST3GAL1Q11201 340 aa21.79■■□□□ 1.08
LYSMD4-201ENST00000332728 ATG9AQ7Z3C6 839 aa21.79■■□□□ 1.08
LYSMD4-201ENST00000332728 RBSNQ9H1K0 784 aa21.79■■□□□ 1.08
LYSMD4-201ENST00000332728 ADORA1P30542 326 aa21.78■■□□□ 1.08
LYSMD4-201ENST00000332728 NASPP49321 788 aaPredicted RBP21.78■■□□□ 1.08
LYSMD4-201ENST00000332728 XIRP1Q702N8 1843 aaKnown RBP21.78■■□□□ 1.08
LYSMD4-201ENST00000332728 RPAP1Q9BWH6 1393 aaPredicted RBP21.77■■□□□ 1.08
LYSMD4-201ENST00000332728 ERVV-2B6SEH9 535 aa21.77■■□□□ 1.08
LYSMD4-201ENST00000332728 H7C1W4 665 aa21.77■■□□□ 1.08
LYSMD4-201ENST00000332728 MAP4K1Q92918 833 aa21.77■■□□□ 1.08
LYSMD4-201ENST00000332728 CLEC17AQ6ZS10 378 aa21.77■■□□□ 1.08
LYSMD4-201ENST00000332728 TAF7LQ5H9L4 462 aa21.76■■□□□ 1.07
LYSMD4-201ENST00000332728 AFDNP55196 1824 aaKnown RBP21.76■■□□□ 1.07
LYSMD4-201ENST00000332728 TCHHQ07283 1943 aa21.76■■□□□ 1.07
LYSMD4-201ENST00000332728 RABL6Q3YEC7 729 aaPredicted RBP21.76■■□□□ 1.07
LYSMD4-201ENST00000332728 ATG3Q9NT62 314 aa21.76■■□□□ 1.07
LYSMD4-201ENST00000332728 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.75■■□□□ 1.07
LYSMD4-201ENST00000332728 STX6O43752 255 aa21.75■■□□□ 1.07
LYSMD4-201ENST00000332728 GORABQ5T7V8 394 aa21.75■■□□□ 1.07
LYSMD4-201ENST00000332728 SNAP23O00161 211 aa21.75■■□□□ 1.07
LYSMD4-201ENST00000332728 TAF5LO75529 589 aa21.75■■□□□ 1.07
LYSMD4-201ENST00000332728 BLOC1S2Q6QNY1 142 aa21.75■■□□□ 1.07
LYSMD4-201ENST00000332728 INTS4Q96HW7 963 aaKnown RBP21.75■■□□□ 1.07
LYSMD4-201ENST00000332728 SLC4A9Q96Q91 983 aa21.75■■□□□ 1.07
LYSMD4-201ENST00000332728 ZSWIM6Q9HCJ5 1215 aa21.75■■□□□ 1.07
LYSMD4-201ENST00000332728 A0A1B0GUL7 405 aa21.74■■□□□ 1.07
LYSMD4-201ENST00000332728 KCNQ4P56696 695 aa21.74■■□□□ 1.07
LYSMD4-201ENST00000332728 DDX11Q96FC9 970 aa21.74■■□□□ 1.07
LYSMD4-201ENST00000332728 CRYBG1Q9Y4K1 1723 aa21.74■■□□□ 1.07
LYSMD4-201ENST00000332728 ERBB4Q15303 1308 aa21.74■■□□□ 1.07
LYSMD4-201ENST00000332728 ATP5JP18859 108 aa21.74■■□□□ 1.07
LYSMD4-201ENST00000332728 DNM1Q05193 864 aaKnown RBP21.74■■□□□ 1.07
LYSMD4-201ENST00000332728 SMIM5Q71RC9 77 aa21.74■■□□□ 1.07
LYSMD4-201ENST00000332728 HELBQ8NG08 1087 aaPredicted RBP21.74■■□□□ 1.07
LYSMD4-201ENST00000332728 ANO8Q9HCE9 1232 aaPredicted RBP21.74■■□□□ 1.07
LYSMD4-201ENST00000332728 LMTK3Q96Q04 1460 aa21.73■■□□□ 1.07
LYSMD4-201ENST00000332728 HSP90B1P14625 803 aaKnown RBP21.73■■□□□ 1.07
LYSMD4-201ENST00000332728 ZBTB1Q9Y2K1 713 aa21.73■■□□□ 1.07
LYSMD4-201ENST00000332728 FGD1P98174 961 aa21.73■■□□□ 1.07
LYSMD4-201ENST00000332728 CCDC57Q2TAC2 916 aa21.73■■□□□ 1.07
LYSMD4-201ENST00000332728 RAB11FIP4Q86YS3 637 aa21.73■■□□□ 1.07
LYSMD4-201ENST00000332728 ZNF609O15014 1411 aa21.73■■□□□ 1.07
LYSMD4-201ENST00000332728 TTLL5Q6EMB2 1281 aa21.72■■□□□ 1.07
LYSMD4-201ENST00000332728 WDR33Q9C0J8 1336 aaKnown RBP21.72■■□□□ 1.07
LYSMD4-201ENST00000332728 ADAMTS7Q9UKP4 1686 aa21.72■■□□□ 1.07
LYSMD4-201ENST00000332728 HAND2P61296 217 aa21.72■■□□□ 1.07
LYSMD4-201ENST00000332728 JAK2O60674 1132 aa21.71■■□□□ 1.07
LYSMD4-201ENST00000332728 IFIT1P09914 478 aaKnown RBP21.71■■□□□ 1.07
LYSMD4-201ENST00000332728 ZSCAN22P10073 491 aaPredicted RBP21.71■■□□□ 1.07
LYSMD4-201ENST00000332728 SCARF1Q14162 830 aa21.71■■□□□ 1.07
LYSMD4-201ENST00000332728 TRIM44Q96DX7 344 aaPredicted RBP21.71■■□□□ 1.07
LYSMD4-201ENST00000332728 KIF6Q6ZMV9 814 aa21.71■■□□□ 1.07
LYSMD4-201ENST00000332728 PAG1Q9NWQ8 432 aa21.71■■□□□ 1.07
LYSMD4-201ENST00000332728 PIP4K2BP78356 416 aa21.7■■□□□ 1.07
LYSMD4-201ENST00000332728 EYA2O00167 538 aa21.7■■□□□ 1.06
LYSMD4-201ENST00000332728 PTMSP20962 102 aa21.7■■□□□ 1.06
LYSMD4-201ENST00000332728 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.7■■□□□ 1.06
LYSMD4-201ENST00000332728 CYP21A2P08686 494 aa21.7■■□□□ 1.06
LYSMD4-201ENST00000332728 ARFGEF2Q9Y6D5 1785 aa21.7■■□□□ 1.06
LYSMD4-201ENST00000332728 KDM4AO75164 1064 aa21.69■■□□□ 1.06
LYSMD4-201ENST00000332728 TCIRG1Q13488 830 aa21.69■■□□□ 1.06
LYSMD4-201ENST00000332728 WASHC4Q2M389 1173 aa21.69■■□□□ 1.06
LYSMD4-201ENST00000332728 CDC37L1Q7L3B6 337 aa21.69■■□□□ 1.06
LYSMD4-201ENST00000332728 CCDC191Q8NCU4 936 aa21.69■■□□□ 1.06
LYSMD4-201ENST00000332728 HAUS7Q99871 368 aa21.69■■□□□ 1.06
LYSMD4-201ENST00000332728 TFIP11Q9UBB9 837 aaKnown RBP21.69■■□□□ 1.06
LYSMD4-201ENST00000332728 TOB2Q14106 344 aaPredicted RBP21.69■■□□□ 1.06
LYSMD4-201ENST00000332728 CEP126Q9P2H0 1117 aa21.69■■□□□ 1.06
LYSMD4-201ENST00000332728 STRCQ7RTU9 1775 aa21.68■■□□□ 1.06
LYSMD4-201ENST00000332728 HIP1O00291 1037 aa21.68■■□□□ 1.06
LYSMD4-201ENST00000332728 LARP1BQ659C4 914 aaKnown RBP21.68■■□□□ 1.06
LYSMD4-201ENST00000332728 FAM43AQ8N2R8 423 aa21.68■■□□□ 1.06
LYSMD4-201ENST00000332728 GREM2Q9H772 168 aa21.68■■□□□ 1.06
LYSMD4-201ENST00000332728 MRC1P22897 1456 aa21.68■■□□□ 1.06
LYSMD4-201ENST00000332728 NKX1-1Q15270 411 aaPredicted RBP21.68■■□□□ 1.06
LYSMD4-201ENST00000332728 Q6ZUG5 572 aa21.68■■□□□ 1.06
LYSMD4-201ENST00000332728 STOX1Q6ZVD7 989 aa21.68■■□□□ 1.06
LYSMD4-201ENST00000332728 F13A1P00488 732 aa21.67■■□□□ 1.06
LYSMD4-201ENST00000332728 CCT2P78371 535 aaKnown RBP21.67■■□□□ 1.06
LYSMD4-201ENST00000332728 GPHNQ9NQX3 736 aaPredicted RBP21.67■■□□□ 1.06
LYSMD4-201ENST00000332728 MED23Q9ULK4 1368 aa21.67■■□□□ 1.06
LYSMD4-201ENST00000332728 RPS6KB1P23443 525 aa21.67■■□□□ 1.06
LYSMD4-201ENST00000332728 CEBPZQ03701 1054 aaKnown RBP21.67■■□□□ 1.06
LYSMD4-201ENST00000332728 MCMDC2Q4G0Z9 681 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms