RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 SCN11AQ9UI33 1791 aa22.77■■□□□ 1.24
LAMP1-201ENST00000332556 SLC27A2O14975 620 aa22.77■■□□□ 1.24
LAMP1-201ENST00000332556 TIMM10P62072 90 aa22.77■■□□□ 1.24
LAMP1-201ENST00000332556 OVOS2A0A0G2JMS6 1433 aa22.76■■□□□ 1.23
LAMP1-201ENST00000332556 LRRC2Q9BYS8 371 aa22.76■■□□□ 1.23
LAMP1-201ENST00000332556 CYP46A1Q9Y6A2 500 aa22.76■■□□□ 1.23
LAMP1-201ENST00000332556 CAMTA1Q9Y6Y1 1673 aa22.76■■□□□ 1.23
LAMP1-201ENST00000332556 TNNI3KQ59H18 835 aa22.76■■□□□ 1.23
LAMP1-201ENST00000332556 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.76■■□□□ 1.234e-10■■■■□ 22.5
LAMP1-201ENST00000332556 FPGT-TNNI3KV9GXZ4 949 aa22.76■■□□□ 1.23
LAMP1-201ENST00000332556 TNS3Q68CZ2 1445 aa22.76■■□□□ 1.23
LAMP1-201ENST00000332556 STX6O43752 255 aa22.75■■□□□ 1.23
LAMP1-201ENST00000332556 COL15A1P39059 1388 aa22.75■■□□□ 1.23
LAMP1-201ENST00000332556 WDR33Q9C0J8 1336 aaKnown RBP22.74■■□□□ 1.23
LAMP1-201ENST00000332556 KAT6BQ8WYB5 2073 aa22.74■■□□□ 1.23
LAMP1-201ENST00000332556 A0A0G2JLW4 131 aa22.74■■□□□ 1.23
LAMP1-201ENST00000332556 ZSCAN22P10073 491 aaPredicted RBP22.74■■□□□ 1.23
LAMP1-201ENST00000332556 DNM1Q05193 864 aaKnown RBP22.74■■□□□ 1.23
LAMP1-201ENST00000332556 ZCRB1Q8TBF4 217 aaKnown RBP22.74■■□□□ 1.23
LAMP1-201ENST00000332556 MAP4K1Q92918 833 aa22.74■■□□□ 1.23
LAMP1-201ENST00000332556 ZSWIM6Q9HCJ5 1215 aa22.74■■□□□ 1.23
LAMP1-201ENST00000332556 ZKSCAN1P17029 563 aaPredicted RBP22.73■■□□□ 1.23
LAMP1-201ENST00000332556 CSPP1Q1MSJ5 1256 aa22.73■■□□□ 1.23
LAMP1-201ENST00000332556 LRRC24Q50LG9 513 aa22.73■■□□□ 1.23
LAMP1-201ENST00000332556 AEBP2Q6ZN18 517 aaPredicted RBP22.73■■□□□ 1.23
LAMP1-201ENST00000332556 COL18A1P39060 1754 aa22.73■■□□□ 1.23
LAMP1-201ENST00000332556 KIF1AQ12756 1690 aa22.73■■□□□ 1.23
LAMP1-201ENST00000332556 IL17RAQ96F46 866 aa22.73■■□□□ 1.23
LAMP1-201ENST00000332556 FOSBP53539 338 aa22.72■■□□□ 1.23
LAMP1-201ENST00000332556 PUS3Q9BZE2 481 aaKnown RBP22.72■■□□□ 1.23
LAMP1-201ENST00000332556 C17orf53Q8N3J3 647 aaPredicted RBP22.72■■□□□ 1.23
LAMP1-201ENST00000332556 USP25Q9UHP3 1055 aa22.72■■□□□ 1.23
LAMP1-201ENST00000332556 HDAC5Q9UQL6 1122 aa22.72■■□□□ 1.23
LAMP1-201ENST00000332556 MCM5P33992 734 aa22.71■■□□□ 1.23
LAMP1-201ENST00000332556 DNTTIP2Q5QJE6 756 aaKnown RBP22.71■■□□□ 1.23
LAMP1-201ENST00000332556 TSC1Q92574 1164 aa22.71■■□□□ 1.23
LAMP1-201ENST00000332556 SYNE4Q8N205 404 aa22.7■■□□□ 1.22
LAMP1-201ENST00000332556 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.7■■□□□ 1.22
LAMP1-201ENST00000332556 ZNF335Q9H4Z2 1342 aaPredicted RBP22.7■■□□□ 1.22
LAMP1-201ENST00000332556 F13A1P00488 732 aa22.7■■□□□ 1.22
LAMP1-201ENST00000332556 SASS6Q6UVJ0 657 aa22.7■■□□□ 1.22
LAMP1-201ENST00000332556 PLBD2Q8NHP8 589 aa22.7■■□□□ 1.22
LAMP1-201ENST00000332556 SYAP1Q96A49 352 aaPredicted RBP22.7■■□□□ 1.22
LAMP1-201ENST00000332556 COPRSQ9NQ92 184 aa22.7■■□□□ 1.22
LAMP1-201ENST00000332556 CASP7P55210 303 aa22.69■■□□□ 1.22
LAMP1-201ENST00000332556 FOXO4P98177 505 aa22.69■■□□□ 1.22
LAMP1-201ENST00000332556 VPS53Q5VIR6 699 aa22.69■■□□□ 1.22
LAMP1-201ENST00000332556 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.69■■□□□ 1.22
LAMP1-201ENST00000332556 CRYBG1Q9Y4K1 1723 aa22.69■■□□□ 1.22
LAMP1-201ENST00000332556 GOLIM4O00461 696 aa22.69■■□□□ 1.22
LAMP1-201ENST00000332556 KIAA2012Q0VF49 1180 aa22.69■■□□□ 1.22
LAMP1-201ENST00000332556 ADAMTS7Q9UKP4 1686 aa22.69■■□□□ 1.22
LAMP1-201ENST00000332556 AFDNP55196 1824 aaKnown RBP22.68■■□□□ 1.22
LAMP1-201ENST00000332556 TAF5LO75529 589 aa22.68■■□□□ 1.22
LAMP1-201ENST00000332556 HSP90AB3PQ58FF7 597 aa22.68■■□□□ 1.22
LAMP1-201ENST00000332556 CDC37L1Q7L3B6 337 aa22.68■■□□□ 1.22
LAMP1-201ENST00000332556 TTC12Q9H892 705 aaPredicted RBP22.68■■□□□ 1.22
LAMP1-201ENST00000332556 SNRKQ9NRH2 765 aa22.68■■□□□ 1.22
LAMP1-201ENST00000332556 MTMR6Q9Y217 621 aa22.68■■□□□ 1.22
LAMP1-201ENST00000332556 EVA1CP58658 441 aa22.67■■□□□ 1.22
LAMP1-201ENST00000332556 BLOC1S2Q6QNY1 142 aa22.67■■□□□ 1.22
LAMP1-201ENST00000332556 HCLS1P14317 486 aaPredicted RBP22.66■■□□□ 1.22
LAMP1-201ENST00000332556 DYNC1I1O14576 645 aa22.66■■□□□ 1.22
LAMP1-201ENST00000332556 PLCB2Q00722 1185 aa22.66■■□□□ 1.22
LAMP1-201ENST00000332556 TOB2Q14106 344 aaPredicted RBP22.66■■□□□ 1.22
LAMP1-201ENST00000332556 ZNF609O15014 1411 aa22.66■■□□□ 1.22
LAMP1-201ENST00000332556 JAK2O60674 1132 aa22.65■■□□□ 1.22
LAMP1-201ENST00000332556 RABL6Q3YEC7 729 aaPredicted RBP22.65■■□□□ 1.22
LAMP1-201ENST00000332556 CHST3Q7LGC8 479 aa22.65■■□□□ 1.22
LAMP1-201ENST00000332556 ATG9AQ7Z3C6 839 aa22.65■■□□□ 1.22
LAMP1-201ENST00000332556 DDX11Q96FC9 970 aa22.65■■□□□ 1.22
LAMP1-201ENST00000332556 ASAP1Q9ULH1 1129 aa22.65■■□□□ 1.22
LAMP1-201ENST00000332556 WDR17Q8IZU2 1322 aa22.65■■□□□ 1.22
LAMP1-201ENST00000332556 A0A0G2JS52 829 aa22.65■■□□□ 1.22
LAMP1-201ENST00000332556 LARP1BQ659C4 914 aaKnown RBP22.65■■□□□ 1.22
LAMP1-201ENST00000332556 TFIP11Q9UBB9 837 aaKnown RBP22.65■■□□□ 1.22
LAMP1-201ENST00000332556 MED23Q9ULK4 1368 aa22.64■■□□□ 1.22
LAMP1-201ENST00000332556 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.64■■□□□ 1.21
LAMP1-201ENST00000332556 FAM177BA6PVY3 158 aa22.64■■□□□ 1.21
LAMP1-201ENST00000332556 EPB41L2O43491 1005 aaKnown RBP22.64■■□□□ 1.21
LAMP1-201ENST00000332556 ATP5JP18859 108 aa22.64■■□□□ 1.21
LAMP1-201ENST00000332556 GIMAP6Q6P9H5 292 aa22.64■■□□□ 1.21
LAMP1-201ENST00000332556 FAM89AQ96GI7 184 aa22.64■■□□□ 1.21
LAMP1-201ENST00000332556 CWC25Q9NXE8 425 aaPredicted RBP22.64■■□□□ 1.21
LAMP1-201ENST00000332556 SLAIN2Q9P270 581 aa22.64■■□□□ 1.21
LAMP1-201ENST00000332556 ADCY5O95622 1261 aa22.64■■□□□ 1.21
LAMP1-201ENST00000332556 PHF14O94880 888 aa22.63■■□□□ 1.21
LAMP1-201ENST00000332556 ARFGEF2Q9Y6D5 1785 aa22.63■■□□□ 1.21
LAMP1-201ENST00000332556 IL2RBP14784 551 aa22.63■■□□□ 1.21
LAMP1-201ENST00000332556 RPS6KB1P23443 525 aa22.63■■□□□ 1.21
LAMP1-201ENST00000332556 GPTP24298 496 aa22.63■■□□□ 1.21
LAMP1-201ENST00000332556 MAP7D2Q96T17 732 aa22.63■■□□□ 1.21
LAMP1-201ENST00000332556 TAOK2Q9UL54 1235 aa22.63■■□□□ 1.21
LAMP1-201ENST00000332556 NAP1L2Q9ULW6 460 aaPredicted RBP22.63■■□□□ 1.21
LAMP1-201ENST00000332556 PCDH11XQ9BZA7 1347 aa22.63■■□□□ 1.21
LAMP1-201ENST00000332556 PCDH11YQ9BZA8 1340 aa22.63■■□□□ 1.21
LAMP1-201ENST00000332556 CYP21A2P08686 494 aa22.62■■□□□ 1.21
LAMP1-201ENST00000332556 KCNB2Q92953 911 aa22.62■■□□□ 1.21
LAMP1-201ENST00000332556 H7C1W4 665 aa22.62■■□□□ 1.21
LAMP1-201ENST00000332556 HIP1O00291 1037 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms