RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 FAM89AQ96GI7 184 aa23.38■■□□□ 1.33
RAB28-202ENST00000330852 ANP32CO43423 234 aa23.37■■□□□ 1.33
RAB28-202ENST00000330852 DDX58O95786 925 aaKnown RBP23.37■■□□□ 1.33
RAB28-202ENST00000330852 LMOD1P29536 600 aaPredicted RBP23.37■■□□□ 1.33
RAB28-202ENST00000330852 LRRC37AA6NMS7 1700 aa23.37■■□□□ 1.33
RAB28-202ENST00000330852 EAPPQ56P03 285 aaPredicted RBP23.36■■□□□ 1.33
RAB28-202ENST00000330852 PHAXQ9H814 394 aaKnown RBP23.36■■□□□ 1.33
RAB28-202ENST00000330852 GJA3Q9Y6H8 435 aa23.36■■□□□ 1.33
RAB28-202ENST00000330852 IL16Q14005 1332 aa23.36■■□□□ 1.33
RAB28-202ENST00000330852 PASKQ96RG2 1323 aa23.36■■□□□ 1.33
RAB28-202ENST00000330852 WWC1Q8IX03 1113 aa23.36■■□□□ 1.33
RAB28-202ENST00000330852 ZBTB38Q8NAP3 1195 aaPredicted RBP23.36■■□□□ 1.33
RAB28-202ENST00000330852 CCDC191Q8NCU4 936 aa23.36■■□□□ 1.33
RAB28-202ENST00000330852 ZNRF3Q9ULT6 936 aa23.36■■□□□ 1.33
RAB28-202ENST00000330852 AOC3Q16853 763 aa23.35■■□□□ 1.33
RAB28-202ENST00000330852 CLEC11AQ9Y240 323 aa23.35■■□□□ 1.33
RAB28-202ENST00000330852 CACNA1FO60840 1977 aa23.35■■□□□ 1.33
RAB28-202ENST00000330852 IRS4O14654 1257 aaPredicted RBP23.34■■□□□ 1.33
RAB28-202ENST00000330852 ITGBL1O95965 494 aaPredicted RBP23.34■■□□□ 1.33
RAB28-202ENST00000330852 KIAA2012Q0VF49 1180 aa23.34■■□□□ 1.33
RAB28-202ENST00000330852 IFFO2Q5TF58 517 aa23.34■■□□□ 1.33
RAB28-202ENST00000330852 MRS2Q9HD23 443 aa23.34■■□□□ 1.33
RAB28-202ENST00000330852 SLC51AQ86UW1 340 aa23.33■■□□□ 1.33
RAB28-202ENST00000330852 SCNN1DP51172 638 aa23.32■■□□□ 1.32
RAB28-202ENST00000330852 METTL22Q9BUU2 404 aaPredicted RBP23.32■■□□□ 1.32
RAB28-202ENST00000330852 PCCAP05165 728 aaPredicted RBP23.31■■□□□ 1.32
RAB28-202ENST00000330852 USP50Q70EL3 339 aaPredicted RBP23.31■■□□□ 1.32
RAB28-202ENST00000330852 MYD88Q99836 296 aa23.31■■□□□ 1.32
RAB28-202ENST00000330852 STK31Q9BXU1 1019 aa23.31■■□□□ 1.32
RAB28-202ENST00000330852 LTBP1Q14766 1721 aa23.31■■□□□ 1.32
RAB28-202ENST00000330852 CNTROBQ8N137 903 aa23.3■■□□□ 1.32
RAB28-202ENST00000330852 TSPYL6Q8N831 410 aa23.3■■□□□ 1.32
RAB28-202ENST00000330852 CWC25Q9NXE8 425 aaPredicted RBP23.3■■□□□ 1.32
RAB28-202ENST00000330852 CDHR2Q9BYE9 1310 aa23.3■■□□□ 1.32
RAB28-202ENST00000330852 TMEM88BA6NKF7 163 aa23.3■■□□□ 1.32
RAB28-202ENST00000330852 CXCL9Q07325 125 aa23.3■■□□□ 1.32
RAB28-202ENST00000330852 TNIP1Q15025 636 aa23.3■■□□□ 1.32
RAB28-202ENST00000330852 CELF1Q92879 486 aaKnown RBP23.3■■□□□ 1.32
RAB28-202ENST00000330852 RPS8P62241 208 aaKnown RBP23.29■■□□□ 1.32
RAB28-202ENST00000330852 RTL5Q5HYW3 569 aaPredicted RBP23.29■■□□□ 1.32
RAB28-202ENST00000330852 KSR2Q6VAB6 950 aa23.29■■□□□ 1.32
RAB28-202ENST00000330852 TSR2Q969E8 191 aaKnown RBP23.29■■□□□ 1.32
RAB28-202ENST00000330852 ZNF428Q96B54 188 aa23.29■■□□□ 1.32
RAB28-202ENST00000330852 TWISTNBQ3B726 338 aaPredicted RBP23.28■■□□□ 1.32
RAB28-202ENST00000330852 CIAPIN1Q6FI81 312 aa23.28■■□□□ 1.32
RAB28-202ENST00000330852 GPRC5DQ9NZD1 345 aa23.28■■□□□ 1.32
RAB28-202ENST00000330852 DUOX1Q9NRD9 1551 aa23.28■■□□□ 1.32
RAB28-202ENST00000330852 EPS15P42566 896 aa23.28■■□□□ 1.32
RAB28-202ENST00000330852 NSFL1CQ9UNZ2 370 aaKnown RBP23.28■■□□□ 1.32
RAB28-202ENST00000330852 PDE8AO60658 829 aa23.27■■□□□ 1.32
RAB28-202ENST00000330852 CCDC152Q4G0S7 254 aa23.27■■□□□ 1.32
RAB28-202ENST00000330852 WDR63Q8IWG1 891 aa23.27■■□□□ 1.32
RAB28-202ENST00000330852 ADARB2Q9NS39 739 aaKnown RBP23.27■■□□□ 1.32
RAB28-202ENST00000330852 MAP3K2Q9Y2U5 619 aa23.27■■□□□ 1.32
RAB28-202ENST00000330852 NEXNQ0ZGT2 675 aa23.26■■□□□ 1.31
RAB28-202ENST00000330852 WASHC4Q2M389 1173 aa23.26■■□□□ 1.31
RAB28-202ENST00000330852 MAP1SQ66K74 1059 aaPredicted RBP23.26■■□□□ 1.31
RAB28-202ENST00000330852 CNTNAP1P78357 1384 aa23.25■■□□□ 1.31
RAB28-202ENST00000330852 EYA3Q99504 573 aa23.25■■□□□ 1.31
RAB28-202ENST00000330852 MYH3P11055 1940 aa23.25■■□□□ 1.31
RAB28-202ENST00000330852 PI4KAP2A4QPH2 592 aa23.25■■□□□ 1.31
RAB28-202ENST00000330852 PI4KAP1Q8N8J0 262 aa23.25■■□□□ 1.31
RAB28-202ENST00000330852 TRPM7Q96QT4 1865 aa23.24■■□□□ 1.31
RAB28-202ENST00000330852 PODXL2Q9NZ53 605 aa23.24■■□□□ 1.31
RAB28-202ENST00000330852 MKRN1Q9UHC7 482 aaKnown RBP23.24■■□□□ 1.31
RAB28-202ENST00000330852 C6orf229H3BNL8 230 aa23.23■■□□□ 1.31
RAB28-202ENST00000330852 BCL2L13Q9BXK5 485 aa23.23■■□□□ 1.31
RAB28-202ENST00000330852 SLC4A2P04920 1241 aa23.22■■□□□ 1.31
RAB28-202ENST00000330852 GMPSP49915 693 aaPredicted RBP23.22■■□□□ 1.31
RAB28-202ENST00000330852 GPSM2P81274 684 aa23.22■■□□□ 1.31
RAB28-202ENST00000330852 RAD17O75943 681 aa23.22■■□□□ 1.31
RAB28-202ENST00000330852 POLLQ9UGP5 575 aa23.22■■□□□ 1.31
RAB28-202ENST00000330852 PCNTO95613 3336 aa23.21■■□□□ 1.31
RAB28-202ENST00000330852 IGKV5-2P06315 115 aa23.21■■□□□ 1.31
RAB28-202ENST00000330852 HSPA1AP0DMV8 641 aaKnown RBP23.21■■□□□ 1.31
RAB28-202ENST00000330852 HSPA1BP0DMV9 641 aaKnown RBP23.21■■□□□ 1.31
RAB28-202ENST00000330852 ZC3H15Q8WU90 426 aaKnown RBP23.21■■□□□ 1.31
RAB28-202ENST00000330852 YDJCA8MPS7 323 aa23.2■■□□□ 1.3
RAB28-202ENST00000330852 TBC1D16Q8TBP0 767 aa23.2■■□□□ 1.3
RAB28-202ENST00000330852 DPF2Q92785 391 aa23.2■■□□□ 1.3
RAB28-202ENST00000330852 SEC31BQ9NQW1 1179 aa23.2■■□□□ 1.3
RAB28-202ENST00000330852 FANCIQ9NVI1 1328 aa23.2■■□□□ 1.3
RAB28-202ENST00000330852 COL4A1P02462 1669 aa23.2■■□□□ 1.3
RAB28-202ENST00000330852 ZC3H12CQ9C0D7 883 aaKnown RBP23.19■■□□□ 1.3
RAB28-202ENST00000330852 PGAP2Q9UHJ9 254 aa23.19■■□□□ 1.3
RAB28-202ENST00000330852 RASSF10A6NK89 507 aa23.19■■□□□ 1.3
RAB28-202ENST00000330852 ANKRD18AQ8IVF6 992 aa23.19■■□□□ 1.3
RAB28-202ENST00000330852 NEURL1BA8MQ27 555 aa23.18■■□□□ 1.3
RAB28-202ENST00000330852 H7C1D1 291 aa23.18■■□□□ 1.3
RAB28-202ENST00000330852 CTSWP56202 376 aa23.18■■□□□ 1.3
RAB28-202ENST00000330852 CDC5LQ99459 802 aaKnown RBP23.18■■□□□ 1.3
RAB28-202ENST00000330852 ANKIB1Q9P2G1 1089 aa23.18■■□□□ 1.3
RAB28-202ENST00000330852 CNOT7Q9UIV1 285 aaKnown RBP23.18■■□□□ 1.3
RAB28-202ENST00000330852 RTL9Q8NET4 1388 aa23.17■■□□□ 1.3
RAB28-202ENST00000330852 RIMBP2O15034 1052 aa23.17■■□□□ 1.3
RAB28-202ENST00000330852 RPS12P25398 132 aaKnown RBP23.17■■□□□ 1.3
RAB28-202ENST00000330852 FLIIQ13045 1269 aa23.17■■□□□ 1.3
RAB28-202ENST00000330852 DEFB115Q30KQ5 88 aa23.17■■□□□ 1.3
RAB28-202ENST00000330852 G2E3Q7L622 706 aa23.17■■□□□ 1.3
RAB28-202ENST00000330852 GGA1Q9UJY5 639 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 666 ms