RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 IFIT5Q13325 482 aaKnown RBP24.65■■□□□ 1.54
RIPPLY3-201ENST00000329553 BOLA2Q9H3K6 86 aa24.65■■□□□ 1.54
RIPPLY3-201ENST00000329553 CTSWP56202 376 aa24.65■■□□□ 1.54
RIPPLY3-201ENST00000329553 IL25Q9H293 177 aa24.65■■□□□ 1.54
RIPPLY3-201ENST00000329553 DBNDD2Q9BQY9 259 aa24.64■■□□□ 1.54
RIPPLY3-201ENST00000329553 CCNL1Q9UK58 526 aaPredicted RBP24.64■■□□□ 1.54
RIPPLY3-201ENST00000329553 FAM177BA6PVY3 158 aa24.63■■□□□ 1.53
RIPPLY3-201ENST00000329553 PDE8AO60658 829 aa24.63■■□□□ 1.53
RIPPLY3-201ENST00000329553 RC3H1Q5TC82 1133 aaKnown RBP24.63■■□□□ 1.53
RIPPLY3-201ENST00000329553 SMIM5Q71RC9 77 aa24.63■■□□□ 1.53
RIPPLY3-201ENST00000329553 EVI5LQ96CN4 794 aa24.63■■□□□ 1.53
RIPPLY3-201ENST00000329553 GREM2Q9H772 168 aa24.63■■□□□ 1.53
RIPPLY3-201ENST00000329553 GPR108Q9NPR9 543 aa24.63■■□□□ 1.53
RIPPLY3-201ENST00000329553 NIP7Q9Y221 180 aaKnown RBP eCLIP24.63■■□□□ 1.53
RIPPLY3-201ENST00000329553 PARP10Q53GL7 1025 aa24.62■■□□□ 1.53
RIPPLY3-201ENST00000329553 UTP14AQ9BVJ6 771 aaKnown RBP24.62■■□□□ 1.53
RIPPLY3-201ENST00000329553 ITGA6P23229 1130 aa24.62■■□□□ 1.53
RIPPLY3-201ENST00000329553 FBXO3Q9UK99 471 aa24.62■■□□□ 1.53
RIPPLY3-201ENST00000329553 SH3TC1Q8TE82 1336 aa24.61■■□□□ 1.53
RIPPLY3-201ENST00000329553 MYH3P11055 1940 aa24.61■■□□□ 1.53
RIPPLY3-201ENST00000329553 ATP5JP18859 108 aa24.61■■□□□ 1.53
RIPPLY3-201ENST00000329553 TIMM10P62072 90 aa24.61■■□□□ 1.53
RIPPLY3-201ENST00000329553 TAF7LQ5H9L4 462 aa24.61■■□□□ 1.53
RIPPLY3-201ENST00000329553 CLEC4GQ6UXB4 293 aa24.61■■□□□ 1.53
RIPPLY3-201ENST00000329553 ANO2Q9NQ90 1003 aa24.61■■□□□ 1.53
RIPPLY3-201ENST00000329553 ZNF652Q9Y2D9 606 aa24.61■■□□□ 1.53
RIPPLY3-201ENST00000329553 RPS6KA4O75676 772 aa24.6■■□□□ 1.53
RIPPLY3-201ENST00000329553 SNX21Q969T3 373 aa24.6■■□□□ 1.53
RIPPLY3-201ENST00000329553 NEUROD6Q96NK8 337 aa24.6■■□□□ 1.53
RIPPLY3-201ENST00000329553 HCLS1P14317 486 aaPredicted RBP24.59■■□□□ 1.53
RIPPLY3-201ENST00000329553 BCL11BQ9C0K0 894 aaPredicted RBP24.59■■□□□ 1.53
RIPPLY3-201ENST00000329553 CEP126Q9P2H0 1117 aa24.59■■□□□ 1.53
RIPPLY3-201ENST00000329553 ANKRD18BA2A2Z9 1011 aa24.59■■□□□ 1.53
RIPPLY3-201ENST00000329553 SGSM2O43147 1006 aa24.59■■□□□ 1.53
RIPPLY3-201ENST00000329553 CWC27Q6UX04 472 aaKnown RBP24.59■■□□□ 1.53
RIPPLY3-201ENST00000329553 NTSR2O95665 410 aa24.58■■□□□ 1.53
RIPPLY3-201ENST00000329553 AK7Q96M32 723 aa24.58■■□□□ 1.53
RIPPLY3-201ENST00000329553 LY75O60449 1722 aa24.58■■□□□ 1.53
RIPPLY3-201ENST00000329553 BCORQ6W2J9 1755 aa24.58■■□□□ 1.53
RIPPLY3-201ENST00000329553 GNPATO15228 680 aa24.57■■□□□ 1.52
RIPPLY3-201ENST00000329553 HSCBQ8IWL3 235 aa24.57■■□□□ 1.52
RIPPLY3-201ENST00000329553 DIAPH3Q9NSV4 1193 aa24.57■■□□□ 1.52
RIPPLY3-201ENST00000329553 RIPOR2Q9Y4F9 1068 aa24.57■■□□□ 1.52
RIPPLY3-201ENST00000329553 A0A1B0GUL7 405 aa24.57■■□□□ 1.52
RIPPLY3-201ENST00000329553 LDHAL6AQ6ZMR3 332 aa24.57■■□□□ 1.52
RIPPLY3-201ENST00000329553 BRPF3Q9ULD4 1205 aa24.57■■□□□ 1.52
RIPPLY3-201ENST00000329553 KRT27Q7Z3Y8 459 aa24.56■■□□□ 1.52
RIPPLY3-201ENST00000329553 EDC3Q96F86 508 aaKnown RBP24.56■■□□□ 1.52
RIPPLY3-201ENST00000329553 ZNF609O15014 1411 aa24.56■■□□□ 1.52
RIPPLY3-201ENST00000329553 CD2BP2O95400 341 aaKnown RBP24.55■■□□□ 1.52
RIPPLY3-201ENST00000329553 RABEP1Q15276 862 aa24.55■■□□□ 1.52
RIPPLY3-201ENST00000329553 BCL2L12Q9HB09 334 aa24.55■■□□□ 1.52
RIPPLY3-201ENST00000329553 AMIGO3Q86WK7 504 aa24.55■■□□□ 1.52
RIPPLY3-201ENST00000329553 BRWD3Q6RI45 1802 aa24.54■■□□□ 1.52
RIPPLY3-201ENST00000329553 FAM196AQ6ZSG2 479 aa24.54■■□□□ 1.52
RIPPLY3-201ENST00000329553 NARFQ9UHQ1 456 aa24.54■■□□□ 1.52
RIPPLY3-201ENST00000329553 RTCBQ9Y3I0 505 aaKnown RBP24.54■■□□□ 1.52
RIPPLY3-201ENST00000329553 NDUFB9Q9Y6M9 179 aa24.54■■□□□ 1.52
RIPPLY3-201ENST00000329553 TAF1LQ8IZX4 1826 aa24.54■■□□□ 1.52
RIPPLY3-201ENST00000329553 USPL1Q5W0Q7 1092 aa24.54■■□□□ 1.52
RIPPLY3-201ENST00000329553 HAUS7Q99871 368 aa24.54■■□□□ 1.52
RIPPLY3-201ENST00000329553 SRP68Q9UHB9 627 aaKnown RBP24.54■■□□□ 1.52
RIPPLY3-201ENST00000329553 RUFY2Q8WXA3 655 aa24.53■■□□□ 1.52
RIPPLY3-201ENST00000329553 FSD1Q9BTV5 496 aa24.53■■□□□ 1.52
RIPPLY3-201ENST00000329553 AKAP2Q9Y2D5 859 aa24.53■■□□□ 1.52
RIPPLY3-201ENST00000329553 EPB41L2O43491 1005 aaKnown RBP24.53■■□□□ 1.52
RIPPLY3-201ENST00000329553 SPRYD3Q8NCJ5 442 aa24.53■■□□□ 1.52
RIPPLY3-201ENST00000329553 CNNM1Q9NRU3 951 aa24.53■■□□□ 1.52
RIPPLY3-201ENST00000329553 LRRC4BQ9NT99 713 aa24.53■■□□□ 1.52
RIPPLY3-201ENST00000329553 RGL2O15211 777 aa24.52■■□□□ 1.52
RIPPLY3-201ENST00000329553 TBC1D9BQ66K14 1250 aa24.52■■□□□ 1.52
RIPPLY3-201ENST00000329553 DNAJC2Q99543 621 aaKnown RBP24.52■■□□□ 1.52
RIPPLY3-201ENST00000329553 LSG1Q9H089 658 aaKnown RBP24.52■■□□□ 1.52
RIPPLY3-201ENST00000329553 HIP1O00291 1037 aa24.51■■□□□ 1.51
RIPPLY3-201ENST00000329553 METTL24Q5JXM2 366 aa24.51■■□□□ 1.51
RIPPLY3-201ENST00000329553 BICDL1Q6ZP65 573 aa24.51■■□□□ 1.51
RIPPLY3-201ENST00000329553 ARHGEF1Q92888 912 aaKnown RBP24.51■■□□□ 1.51
RIPPLY3-201ENST00000329553 DDX60Q8IY21 1712 aaKnown RBP24.51■■□□□ 1.51
RIPPLY3-201ENST00000329553 MCCP23508 829 aa24.51■■□□□ 1.51
RIPPLY3-201ENST00000329553 FAM227BQ96M60 508 aa24.51■■□□□ 1.51
RIPPLY3-201ENST00000329553 PALD1Q9ULE6 856 aa24.51■■□□□ 1.51
RIPPLY3-201ENST00000329553 RIC1Q4ADV7 1423 aa24.51■■□□□ 1.51
RIPPLY3-201ENST00000329553 EP400Q96L91 3159 aa24.51■■□□□ 1.51
RIPPLY3-201ENST00000329553 ZPR1O75312 459 aa24.5■■□□□ 1.51
RIPPLY3-201ENST00000329553 HSP90B1P14625 803 aaKnown RBP24.5■■□□□ 1.51
RIPPLY3-201ENST00000329553 ADORA1P30542 326 aa24.5■■□□□ 1.51
RIPPLY3-201ENST00000329553 NMIQ13287 307 aaPredicted RBP24.5■■□□□ 1.51
RIPPLY3-201ENST00000329553 XAGE2Q96GT9 111 aa24.5■■□□□ 1.51
RIPPLY3-201ENST00000329553 SEC31BQ9NQW1 1179 aa24.5■■□□□ 1.51
RIPPLY3-201ENST00000329553 TRIM37O94972 964 aa24.49■■□□□ 1.51
RIPPLY3-201ENST00000329553 ZNF772Q68DY9 489 aaPredicted RBP24.49■■□□□ 1.51
RIPPLY3-201ENST00000329553 KIAA1211Q6ZU35 1233 aa24.49■■□□□ 1.51
RIPPLY3-201ENST00000329553 CHMP5Q9NZZ3 219 aa24.49■■□□□ 1.51
RIPPLY3-201ENST00000329553 RAD50Q92878 1312 aa24.49■■□□□ 1.51
RIPPLY3-201ENST00000329553 SCN7AQ01118 1682 aa24.49■■□□□ 1.51
RIPPLY3-201ENST00000329553 RBM6P78332 1123 aaKnown RBP24.49■■□□□ 1.51
RIPPLY3-201ENST00000329553 ERFEQ4G0M1 354 aa24.49■■□□□ 1.51
RIPPLY3-201ENST00000329553 C4BP0C0L5 1744 aa24.48■■□□□ 1.51
RIPPLY3-201ENST00000329553 HSPA4P34932 840 aa24.48■■□□□ 1.51
RIPPLY3-201ENST00000329553 CCDC152Q4G0S7 254 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms