RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 NFKB1P19838 968 aa3.18□□□□□ -1.9
CCDC144A-201ENST00000328495 TBC1D8BQ0IIM8 1120 aa3.18□□□□□ -1.9
CCDC144A-201ENST00000328495 MDFIQ99750 246 aa3.18□□□□□ -1.9
CCDC144A-201ENST00000328495 GSX2Q9BZM3 304 aa3.18□□□□□ -1.9
CCDC144A-201ENST00000328495 FAM13BQ9NYF5 915 aa3.18□□□□□ -1.9
CCDC144A-201ENST00000328495 NACADO15069 1562 aa3.18□□□□□ -1.9
CCDC144A-201ENST00000328495 HOXB4P17483 251 aaPredicted RBP3.18□□□□□ -1.9
CCDC144A-201ENST00000328495 SAP130Q9H0E3 1048 aa3.18□□□□□ -1.9
CCDC144A-201ENST00000328495 ARID4AP29374 1257 aaPredicted RBP3.17□□□□□ -1.9
CCDC144A-201ENST00000328495 NAA30Q147X3 362 aaPredicted RBP3.17□□□□□ -1.9
CCDC144A-201ENST00000328495 PCSK7Q16549 785 aa3.17□□□□□ -1.9
CCDC144A-201ENST00000328495 LINC00114Q6XXX2 140 aa3.17□□□□□ -1.9
CCDC144A-201ENST00000328495 KCTD17Q8N5Z5 321 aa3.17□□□□□ -1.9
CCDC144A-201ENST00000328495 ABTB2Q8N961 1025 aa3.17□□□□□ -1.9
CCDC144A-201ENST00000328495 RTCBQ9Y3I0 505 aaKnown RBP3.17□□□□□ -1.9
CCDC144A-201ENST00000328495 SPDYE3A6NKU9 549 aa3.17□□□□□ -1.9
CCDC144A-201ENST00000328495 RGL4Q8IZJ4 473 aa3.17□□□□□ -1.9
CCDC144A-201ENST00000328495 DCAF5Q96JK2 942 aa3.17□□□□□ -1.9
CCDC144A-201ENST00000328495 IGFLR1Q9H665 355 aa3.17□□□□□ -1.9
CCDC144A-201ENST00000328495 SLAIN2Q9P270 581 aa3.17□□□□□ -1.9
CCDC144A-201ENST00000328495 MTMR7Q9Y216 660 aa3.17□□□□□ -1.9
CCDC144A-201ENST00000328495 TMEM88BA6NKF7 163 aa3.17□□□□□ -1.9
CCDC144A-201ENST00000328495 OPLAHO14841 1288 aa3.17□□□□□ -1.9
CCDC144A-201ENST00000328495 MAP3K6O95382 1288 aa3.17□□□□□ -1.9
CCDC144A-201ENST00000328495 RARAP10276 462 aa3.17□□□□□ -1.9
CCDC144A-201ENST00000328495 GRNP28799 593 aaKnown RBP3.17□□□□□ -1.9
CCDC144A-201ENST00000328495 KRT25Q7Z3Z0 450 aa3.17□□□□□ -1.9
CCDC144A-201ENST00000328495 ETFBKMTQ8IXQ9 262 aa3.17□□□□□ -1.9
CCDC144A-201ENST00000328495 CMTR1Q8N1G2 835 aaKnown RBP3.17□□□□□ -1.9
CCDC144A-201ENST00000328495 STIM2Q9P246 746 aa3.17□□□□□ -1.9
CCDC144A-201ENST00000328495 SLC6A14Q9UN76 642 aa3.17□□□□□ -1.9
CCDC144A-201ENST00000328495 USTQ9Y2C2 406 aa3.17□□□□□ -1.9
CCDC144A-201ENST00000328495 HMGXB3Q12766 1538 aa3.16□□□□□ -1.9
CCDC144A-201ENST00000328495 M0R082 166 aa3.16□□□□□ -1.9
CCDC144A-201ENST00000328495 SUPT5HO00267 1087 aaKnown RBP3.16□□□□□ -1.9
CCDC144A-201ENST00000328495 TNFRSF10BO14763 440 aa3.16□□□□□ -1.9
CCDC144A-201ENST00000328495 ALBP02768 609 aa3.16□□□□□ -1.9
CCDC144A-201ENST00000328495 B4GALNT3Q6L9W6 998 aa3.16□□□□□ -1.9
CCDC144A-201ENST00000328495 CAPN12Q6ZSI9 719 aa3.16□□□□□ -1.9
CCDC144A-201ENST00000328495 ZNF417Q8TAU3 575 aa3.16□□□□□ -1.9
CCDC144A-201ENST00000328495 ZNF587Q96SQ5 575 aaPredicted RBP3.16□□□□□ -1.9
CCDC144A-201ENST00000328495 ARID3AQ99856 593 aa3.16□□□□□ -1.9
CCDC144A-201ENST00000328495 PRDM6Q9NQX0 595 aa3.16□□□□□ -1.9
CCDC144A-201ENST00000328495 DNAJB12Q9NXW2 375 aaKnown RBP3.16□□□□□ -1.9
CCDC144A-201ENST00000328495 TIMELESSQ9UNS1 1208 aa3.16□□□□□ -1.9
CCDC144A-201ENST00000328495 XYLBO75191 536 aa3.16□□□□□ -1.9
CCDC144A-201ENST00000328495 EGFRP00533 1210 aa3.16□□□□□ -1.9
CCDC144A-201ENST00000328495 PIK3R5Q8WYR1 880 aa3.16□□□□□ -1.9
CCDC144A-201ENST00000328495 PTPRTO14522 1441 aa3.16□□□□□ -1.9
CCDC144A-201ENST00000328495 LILRB5O75023 590 aa3.15□□□□□ -1.9
CCDC144A-201ENST00000328495 IGHA1P01876 353 aa3.15□□□□□ -1.9
CCDC144A-201ENST00000328495 ZAP70P43403 619 aa3.15□□□□□ -1.9
CCDC144A-201ENST00000328495 DHX32Q7L7V1 743 aaKnown RBP3.15□□□□□ -1.9
CCDC144A-201ENST00000328495 MICALL1Q8N3F8 863 aa3.15□□□□□ -1.9
CCDC144A-201ENST00000328495 HELQQ8TDG4 1101 aa3.15□□□□□ -1.9
CCDC144A-201ENST00000328495 SUV39H2Q9H5I1 410 aa3.15□□□□□ -1.9
CCDC144A-201ENST00000328495 SEPT3Q9UH03 358 aa3.15□□□□□ -1.9
CCDC144A-201ENST00000328495 USP20Q9Y2K6 914 aa3.15□□□□□ -1.9
CCDC144A-201ENST00000328495 STARD13Q9Y3M8 1113 aa3.15□□□□□ -1.9
CCDC144A-201ENST00000328495 SASH3O75995 380 aa3.15□□□□□ -1.91
CCDC144A-201ENST00000328495 TARSP26639 723 aaKnown RBP3.15□□□□□ -1.91
CCDC144A-201ENST00000328495 COL8A1P27658 744 aa3.15□□□□□ -1.91
CCDC144A-201ENST00000328495 SSFA2P28290 1259 aa3.15□□□□□ -1.91
CCDC144A-201ENST00000328495 GPLD1P80108 840 aa3.15□□□□□ -1.91
CCDC144A-201ENST00000328495 PRRT3Q5FWE3 981 aa3.15□□□□□ -1.91
CCDC144A-201ENST00000328495 GPAT2Q6NUI2 795 aa3.15□□□□□ -1.91
CCDC144A-201ENST00000328495 TRIM11Q96F44 468 aa3.15□□□□□ -1.91
CCDC144A-201ENST00000328495 FNDC3AQ9Y2H6 1198 aaKnown RBP3.15□□□□□ -1.91
CCDC144A-201ENST00000328495 WDR62O43379 1518 aa3.15□□□□□ -1.91
CCDC144A-201ENST00000328495 PSAPP07602 524 aa3.15□□□□□ -1.91
CCDC144A-201ENST00000328495 PLVAPQ9BX97 442 aa3.15□□□□□ -1.91
CCDC144A-201ENST00000328495 JPH1Q9HDC5 661 aaPredicted RBP3.15□□□□□ -1.91
CCDC144A-201ENST00000328495 ZFATQ9P243 1243 aa3.15□□□□□ -1.91
CCDC144A-201ENST00000328495 KCNMB2Q9Y691 235 aa3.15□□□□□ -1.91
CCDC144A-201ENST00000328495 UBAP1LF5GYI3 381 aa3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 NRLP54845 237 aa3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 PLA2G4EQ3MJ16 856 aa3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 PSAPL1Q6NUJ1 521 aa3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 C20orf204Q6ZNR8 217 aa3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 FAM35AQ86V20 835 aa3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 TRPM4Q8TD43 1214 aa3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 TLR7Q9NYK1 1049 aaKnown RBP3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 RGS9O75916 674 aaPredicted RBP3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 SPATA31C1P0DKV0 1188 aa3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 PLAURQ03405 335 aa3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 PDE4CQ08493 712 aa3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 NLRP13Q86W25 1043 aa3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 GPR152Q8TDT2 470 aa3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 FRRS1LQ9P0K9 344 aa3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 NAGPAQ9UK23 515 aa3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 RAPGEF6Q8TEU7 1601 aa3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 RPLP1P05386 114 aaKnown RBP3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 CPB1P15086 417 aa3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 PCSK2P16519 638 aa3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 SOX18P35713 384 aa3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 TRIP4Q15650 581 aaPredicted RBP3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 FAM26DQ5JW98 314 aa3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 GTF3C2Q8WUA4 911 aaPredicted RBP3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 NUDT8Q8WV74 236 aa3.14□□□□□ -1.91
CCDC144A-201ENST00000328495 KRBA1A5PL33 1030 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms