RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 PDE4CQ08493 712 aa13.27□□□□□ -0.29
COL4A5-201ENST00000328300 CEP85Q6P2H3 762 aa13.27□□□□□ -0.29
COL4A5-201ENST00000328300 SMC5Q8IY18 1101 aa13.27□□□□□ -0.29
COL4A5-201ENST00000328300 ZBTB40Q9NUA8 1239 aa13.27□□□□□ -0.29
COL4A5-201ENST00000328300 EPB41L2O43491 1005 aaKnown RBP13.26□□□□□ -0.29
COL4A5-201ENST00000328300 CCDC148Q8NFR7 591 aa13.26□□□□□ -0.29
COL4A5-201ENST00000328300 GTPBP4Q9BZE4 634 aaKnown RBP13.26□□□□□ -0.29
COL4A5-201ENST00000328300 BTG4Q9NY30 223 aa13.26□□□□□ -0.29
COL4A5-201ENST00000328300 METTL22Q9BUU2 404 aaPredicted RBP13.26□□□□□ -0.29
COL4A5-201ENST00000328300 TMEM67Q5HYA8 995 aa13.26□□□□□ -0.29
COL4A5-201ENST00000328300 TSG101Q99816 390 aa13.26□□□□□ -0.29
COL4A5-201ENST00000328300 DESP17661 470 aa13.26□□□□□ -0.29
COL4A5-201ENST00000328300 SLC39A6Q13433 755 aa13.26□□□□□ -0.29
COL4A5-201ENST00000328300 PPP4R3AQ6IN85 833 aa13.26□□□□□ -0.29
COL4A5-201ENST00000328300 RTL9Q8NET4 1388 aa13.26□□□□□ -0.29
COL4A5-201ENST00000328300 PHACTR3Q96KR7 559 aa13.26□□□□□ -0.29
COL4A5-201ENST00000328300 ESYT1Q9BSJ8 1104 aa13.26□□□□□ -0.29
COL4A5-201ENST00000328300 PARP3Q9Y6F1 533 aa13.25□□□□□ -0.29
COL4A5-201ENST00000328300 KIF2AO00139 706 aaPredicted RBP13.25□□□□□ -0.29
COL4A5-201ENST00000328300 AMPD3Q01432 767 aa13.25□□□□□ -0.29
COL4A5-201ENST00000328300 UNC13BO14795 1591 aa13.25□□□□□ -0.29
COL4A5-201ENST00000328300 CCDC96Q2M329 555 aa13.25□□□□□ -0.29
COL4A5-201ENST00000328300 RNF214Q8ND24 703 aa13.25□□□□□ -0.29
COL4A5-201ENST00000328300 SNX21Q969T3 373 aa13.25□□□□□ -0.29
COL4A5-201ENST00000328300 RBM17Q96I25 401 aaKnown RBP13.25□□□□□ -0.29
COL4A5-201ENST00000328300 IRS4O14654 1257 aaPredicted RBP13.25□□□□□ -0.29
COL4A5-201ENST00000328300 IGHDP01880 384 aa13.25□□□□□ -0.29
COL4A5-201ENST00000328300 RNF113AO15541 343 aaKnown RBP13.24□□□□□ -0.29
COL4A5-201ENST00000328300 KDM4AO75164 1064 aa13.24□□□□□ -0.29
COL4A5-201ENST00000328300 IQCEQ6IPM2 695 aa13.24□□□□□ -0.29
COL4A5-201ENST00000328300 POLD1P28340 1107 aa13.24□□□□□ -0.29
COL4A5-201ENST00000328300 METAP2P50579 478 aaKnown RBP eCLIP13.24□□□□□ -0.29
COL4A5-201ENST00000328300 CAGE1Q8TC20 777 aa13.24□□□□□ -0.29
COL4A5-201ENST00000328300 SDSP20132 328 aa13.24□□□□□ -0.29
COL4A5-201ENST00000328300 TSPY2A6NKD2 308 aa13.24□□□□□ -0.29
COL4A5-201ENST00000328300 GRPEL1Q9HAV7 217 aa13.24□□□□□ -0.29
COL4A5-201ENST00000328300 PRDM15P57071 1507 aaPredicted RBP13.24□□□□□ -0.29
COL4A5-201ENST00000328300 NLRP5P59047 1200 aa13.24□□□□□ -0.29
COL4A5-201ENST00000328300 STK11IPQ8N1F8 1099 aa13.24□□□□□ -0.29
COL4A5-201ENST00000328300 DDX11Q96FC9 970 aa13.24□□□□□ -0.29
COL4A5-201ENST00000328300 HELLSQ9NRZ9 838 aa13.24□□□□□ -0.29
COL4A5-201ENST00000328300 PAG1Q9NWQ8 432 aa13.24□□□□□ -0.29
COL4A5-201ENST00000328300 FBLN1P23142 703 aa13.23□□□□□ -0.29
COL4A5-201ENST00000328300 LTKP29376 864 aa13.23□□□□□ -0.29
COL4A5-201ENST00000328300 NAA16Q6N069 864 aaPredicted RBP13.23□□□□□ -0.29
COL4A5-201ENST00000328300 CABLES1Q8TDN4 633 aa13.23□□□□□ -0.29
COL4A5-201ENST00000328300 HSP90B2PQ58FF3 399 aa13.23□□□□□ -0.29
COL4A5-201ENST00000328300 TRAPPC3LQ5T215 181 aa13.23□□□□□ -0.29
COL4A5-201ENST00000328300 STXBP4Q6ZWJ1 553 aa13.23□□□□□ -0.29
COL4A5-201ENST00000328300 DENND2AQ9ULE3 1009 aa13.23□□□□□ -0.29
COL4A5-201ENST00000328300 USP16Q9Y5T5 823 aa13.23□□□□□ -0.29
COL4A5-201ENST00000328300 ZNF622Q969S3 477 aaKnown RBP eCLIP13.23□□□□□ -0.29
COL4A5-201ENST00000328300 WTAPQ15007 396 aa13.23□□□□□ -0.29
COL4A5-201ENST00000328300 ZNF397Q8NF99 534 aaPredicted RBP13.23□□□□□ -0.29
COL4A5-201ENST00000328300 CNKSR2Q8WXI2 1034 aa13.23□□□□□ -0.29
COL4A5-201ENST00000328300 ORAI2Q96SN7 254 aa13.22□□□□□ -0.29
COL4A5-201ENST00000328300 CYP7A1P22680 504 aa13.22□□□□□ -0.29
COL4A5-201ENST00000328300 PLA2R1Q13018 1463 aa13.22□□□□□ -0.29
COL4A5-201ENST00000328300 MAST3O60307 1309 aa13.22□□□□□ -0.29
COL4A5-201ENST00000328300 STX6O43752 255 aa13.22□□□□□ -0.29
COL4A5-201ENST00000328300 NBPF7P0C2Y1 421 aaPredicted RBP13.22□□□□□ -0.29
COL4A5-201ENST00000328300 POTEJP0CG39 1038 aa13.22□□□□□ -0.29
COL4A5-201ENST00000328300 PCDHB15Q9Y5E8 787 aa13.22□□□□□ -0.29
COL4A5-201ENST00000328300 SH3TC1Q8TE82 1336 aa13.22□□□□□ -0.29
COL4A5-201ENST00000328300 DEF6Q9H4E7 631 aa13.22□□□□□ -0.29
COL4A5-201ENST00000328300 PRM3Q9NNZ6 103 aa13.22□□□□□ -0.29
COL4A5-201ENST00000328300 ACSBG1Q96GR2 724 aa13.21□□□□□ -0.29
COL4A5-201ENST00000328300 TANGO6Q9C0B7 1094 aa13.21□□□□□ -0.29
COL4A5-201ENST00000328300 TBC1D2Q9BYX2 928 aa13.21□□□□□ -0.29
COL4A5-201ENST00000328300 TCP11L1Q9NUJ3 509 aa13.21□□□□□ -0.29
COL4A5-201ENST00000328300 BRPF3Q9ULD4 1205 aa13.21□□□□□ -0.29
COL4A5-201ENST00000328300 NEMFO60524 1076 aa13.21□□□□□ -0.29
COL4A5-201ENST00000328300 PDE8AO60658 829 aa13.21□□□□□ -0.29
COL4A5-201ENST00000328300 ERLIN2O94905 339 aa13.21□□□□□ -0.29
COL4A5-201ENST00000328300 ANXA1P04083 346 aa13.21□□□□□ -0.29
COL4A5-201ENST00000328300 CALML4Q96GE6 196 aa13.21□□□□□ -0.29
COL4A5-201ENST00000328300 ZHX3Q9H4I2 956 aa13.21□□□□□ -0.29
COL4A5-201ENST00000328300 ABCA9Q8IUA7 1624 aa13.21□□□□□ -0.3
COL4A5-201ENST00000328300 NAP1L4Q99733 375 aaKnown RBP13.21□□□□□ -0.3
COL4A5-201ENST00000328300 PDCL3Q9H2J4 239 aa13.21□□□□□ -0.3
COL4A5-201ENST00000328300 CCDC87Q9NVE4 849 aa13.21□□□□□ -0.3
COL4A5-201ENST00000328300 FKBP15Q5T1M5 1219 aa13.2□□□□□ -0.3
COL4A5-201ENST00000328300 CDC42BPAQ5VT25 1732 aa13.2□□□□□ -0.3
COL4A5-201ENST00000328300 EYA2O00167 538 aa13.2□□□□□ -0.3
COL4A5-201ENST00000328300 GJB2P29033 226 aa13.2□□□□□ -0.3
COL4A5-201ENST00000328300 NOM1Q5C9Z4 860 aaKnown RBP13.2□□□□□ -0.3
COL4A5-201ENST00000328300 OGFOD1Q8N543 542 aa13.2□□□□□ -0.3
COL4A5-201ENST00000328300 ORC3Q9UBD5 711 aaPredicted RBP13.2□□□□□ -0.3
COL4A5-201ENST00000328300 SLC4A4Q9Y6R1 1079 aa13.2□□□□□ -0.3
COL4A5-201ENST00000328300 MAGEB6P1A0A0J9YX57 407 aa13.2□□□□□ -0.3
COL4A5-201ENST00000328300 FLAD1Q8NFF5 587 aa13.2□□□□□ -0.3
COL4A5-201ENST00000328300 SSBP05455 408 aaKnown RBP eCLIP13.2□□□□□ -0.3
COL4A5-201ENST00000328300 FAM114A1Q8IWE2 563 aa13.2□□□□□ -0.3
COL4A5-201ENST00000328300 ZBTB7BO15156 539 aaPredicted RBP13.2□□□□□ -0.3
COL4A5-201ENST00000328300 ZBTB43O43298 467 aa13.2□□□□□ -0.3
COL4A5-201ENST00000328300 RBM25P49756 843 aaKnown RBP13.2□□□□□ -0.3
COL4A5-201ENST00000328300 TSPYL6Q8N831 410 aa13.2□□□□□ -0.3
COL4A5-201ENST00000328300 RBM8AQ9Y5S9 174 aaKnown RBP13.2□□□□□ -0.3
COL4A5-201ENST00000328300 LMTK2Q8IWU2 1503 aa13.19□□□□□ -0.3
COL4A5-201ENST00000328300 STK32BQ9NY57 414 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms