RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 RAD50Q92878 1312 aa18.1■□□□□ 0.49
TPM3-205ENST00000328159 IRS4O14654 1257 aaPredicted RBP18.1■□□□□ 0.49
TPM3-205ENST00000328159 ST18O60284 1047 aa18.1■□□□□ 0.49
TPM3-205ENST00000328159 CAMTA2O94983 1202 aa18.1■□□□□ 0.49
TPM3-205ENST00000328159 KIAA1211Q6ZU35 1233 aa18.1■□□□□ 0.49
TPM3-205ENST00000328159 IL17RAQ96F46 866 aa18.1■□□□□ 0.49
TPM3-205ENST00000328159 LSG1Q9H089 658 aaKnown RBP18.1■□□□□ 0.49
TPM3-205ENST00000328159 CHMP5Q9NZZ3 219 aa18.1■□□□□ 0.49
TPM3-205ENST00000328159 PALD1Q9ULE6 856 aa18.1■□□□□ 0.49
TPM3-205ENST00000328159 BTAF1O14981 1849 aa18.1■□□□□ 0.49
TPM3-205ENST00000328159 ZNF609O15014 1411 aa18.1■□□□□ 0.49
TPM3-205ENST00000328159 AFF2P51816 1311 aa18.1■□□□□ 0.49
TPM3-205ENST00000328159 CTSWP56202 376 aa18.09■□□□□ 0.49
TPM3-205ENST00000328159 IFIT5Q13325 482 aaKnown RBP18.09■□□□□ 0.49
TPM3-205ENST00000328159 TTLL11Q8NHH1 800 aa18.09■□□□□ 0.49
TPM3-205ENST00000328159 GJD4Q96KN9 370 aaPredicted RBP18.09■□□□□ 0.49
TPM3-205ENST00000328159 CCDC85AQ96PX6 553 aaPredicted RBP18.09■□□□□ 0.49
TPM3-205ENST00000328159 FSD1Q9BTV5 496 aa18.09■□□□□ 0.49
TPM3-205ENST00000328159 HSPA4P34932 840 aa18.09■□□□□ 0.49
TPM3-205ENST00000328159 TAF7LQ5H9L4 462 aa18.09■□□□□ 0.49
TPM3-205ENST00000328159 NEUROD6Q96NK8 337 aa18.09■□□□□ 0.49
TPM3-205ENST00000328159 CEP126Q9P2H0 1117 aa18.09■□□□□ 0.49
TPM3-205ENST00000328159 BCORQ6W2J9 1755 aa18.08■□□□□ 0.49
TPM3-205ENST00000328159 PDE8AO60658 829 aa18.08■□□□□ 0.48
TPM3-205ENST00000328159 DDIT3P35638 169 aa18.08■□□□□ 0.48
TPM3-205ENST00000328159 LINC00116Q8NCU8 138 aa18.08■□□□□ 0.48
TPM3-205ENST00000328159 NMIQ13287 307 aaPredicted RBP18.07■□□□□ 0.48
TPM3-205ENST00000328159 PTF1AQ7RTS3 328 aa18.07■□□□□ 0.48
TPM3-205ENST00000328159 ATRNO75882 1429 aa18.07■□□□□ 0.48
TPM3-205ENST00000328159 HSP90AA1P07900 732 aaKnown RBP18.07■□□□□ 0.48
TPM3-205ENST00000328159 TIMM10P62072 90 aa18.07■□□□□ 0.48
TPM3-205ENST00000328159 PARP10Q53GL7 1025 aa18.07■□□□□ 0.48
TPM3-205ENST00000328159 SUSD4Q5VX71 490 aa18.07■□□□□ 0.48
TPM3-205ENST00000328159 AK7Q96M32 723 aa18.07■□□□□ 0.48
TPM3-205ENST00000328159 HAUS7Q99871 368 aa18.07■□□□□ 0.48
TPM3-205ENST00000328159 GREM2Q9H772 168 aa18.07■□□□□ 0.48
TPM3-205ENST00000328159 A0A1B0GUL7 405 aa18.06■□□□□ 0.48
TPM3-205ENST00000328159 ANKRD18BA2A2Z9 1011 aa18.06■□□□□ 0.48
TPM3-205ENST00000328159 ITGA6P23229 1130 aa18.06■□□□□ 0.48
TPM3-205ENST00000328159 UTP14AQ9BVJ6 771 aaKnown RBP18.06■□□□□ 0.48
TPM3-205ENST00000328159 RFX7Q2KHR2 1363 aa18.06■□□□□ 0.48
TPM3-205ENST00000328159 CNTNAP4Q9C0A0 1308 aa18.05■□□□□ 0.48
TPM3-205ENST00000328159 FRAT2O75474 233 aaPredicted RBP18.05■□□□□ 0.48
TPM3-205ENST00000328159 NEK4P51957 841 aa18.05■□□□□ 0.48
TPM3-205ENST00000328159 EDC3Q96F86 508 aaKnown RBP18.05■□□□□ 0.48
TPM3-205ENST00000328159 FAM227BQ96M60 508 aa18.05■□□□□ 0.48
TPM3-205ENST00000328159 DNAJC2Q99543 621 aaKnown RBP18.05■□□□□ 0.48
TPM3-205ENST00000328159 SNRKQ9NRH2 765 aa18.05■□□□□ 0.48
TPM3-205ENST00000328159 AKAP2Q9Y2D5 859 aa18.05■□□□□ 0.48
TPM3-205ENST00000328159 SH3TC1Q8TE82 1336 aa18.05■□□□□ 0.48
TPM3-205ENST00000328159 SBF2Q86WG5 1849 aa18.05■□□□□ 0.48
TPM3-205ENST00000328159 TRPC5Q9UL62 973 aaPredicted RBP18.04■□□□□ 0.48
TPM3-205ENST00000328159 CIZ1Q9ULV3 898 aaPredicted RBP18.04■□□□□ 0.48
TPM3-205ENST00000328159 ONECUT3O60422 494 aaPredicted RBP18.04■□□□□ 0.48
TPM3-205ENST00000328159 PTH1RQ03431 593 aa18.04■□□□□ 0.48
TPM3-205ENST00000328159 FAM182BQ5T319 152 aa18.04■□□□□ 0.48
TPM3-205ENST00000328159 NIP7Q9Y221 180 aaKnown RBP eCLIP18.04■□□□□ 0.48
TPM3-205ENST00000328159 ZNF652Q9Y2D9 606 aa18.04■□□□□ 0.48
TPM3-205ENST00000328159 RIC1Q4ADV7 1423 aa18.03■□□□□ 0.48
TPM3-205ENST00000328159 LAMB2P55268 1798 aa18.03■□□□□ 0.48
TPM3-205ENST00000328159 DDX60Q8IY21 1712 aaKnown RBP18.03■□□□□ 0.48
TPM3-205ENST00000328159 A0A0D9SFI3 127 aa18.03■□□□□ 0.48
TPM3-205ENST00000328159 KCNQ4P56696 695 aa18.03■□□□□ 0.48
TPM3-205ENST00000328159 FOXD4L1Q9NU39 408 aa18.03■□□□□ 0.48
TPM3-205ENST00000328159 RIPOR2Q9Y4F9 1068 aa18.03■□□□□ 0.48
TPM3-205ENST00000328159 SNX14Q9Y5W7 946 aa18.03■□□□□ 0.48
TPM3-205ENST00000328159 NDUFB9Q9Y6M9 179 aa18.03■□□□□ 0.48
TPM3-205ENST00000328159 CCDC171Q6TFL3 1326 aa18.03■□□□□ 0.48
TPM3-205ENST00000328159 FAM177BA6PVY3 158 aa18.02■□□□□ 0.48
TPM3-205ENST00000328159 MCM2P49736 904 aa18.02■□□□□ 0.48
TPM3-205ENST00000328159 LDHAL6AQ6ZMR3 332 aa18.02■□□□□ 0.48
TPM3-205ENST00000328159 IL27Q8NEV9 243 aa18.02■□□□□ 0.48
TPM3-205ENST00000328159 MED23Q9ULK4 1368 aa18.02■□□□□ 0.47
TPM3-205ENST00000328159 SPEF2Q9C093 1822 aa18.02■□□□□ 0.47
TPM3-205ENST00000328159 NTSR2O95665 410 aa18.02■□□□□ 0.47
TPM3-205ENST00000328159 RC3H1Q5TC82 1133 aaKnown RBP18.02■□□□□ 0.47
TPM3-205ENST00000328159 CLEC4GQ6UXB4 293 aa18.02■□□□□ 0.47
TPM3-205ENST00000328159 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.02■□□□□ 0.47
TPM3-205ENST00000328159 LY75O60449 1722 aa18.01■□□□□ 0.47
TPM3-205ENST00000328159 LRP5O75197 1615 aa18.01■□□□□ 0.47
TPM3-205ENST00000328159 HCLS1P14317 486 aaPredicted RBP18.01■□□□□ 0.47
TPM3-205ENST00000328159 METTL24Q5JXM2 366 aa18.01■□□□□ 0.47
TPM3-205ENST00000328159 DDX46Q7L014 1031 aaKnown RBP18.01■□□□□ 0.47
TPM3-205ENST00000328159 SEPT12Q8IYM1 358 aa18.01■□□□□ 0.47
TPM3-205ENST00000328159 CNNM1Q9NRU3 951 aa18.01■□□□□ 0.47
TPM3-205ENST00000328159 PAG1Q9NWQ8 432 aa18.01■□□□□ 0.47
TPM3-205ENST00000328159 SCN7AQ01118 1682 aa18.01■□□□□ 0.47
TPM3-205ENST00000328159 IFIT1P09914 478 aaKnown RBP18■□□□□ 0.47
TPM3-205ENST00000328159 HSP90B1P14625 803 aaKnown RBP18■□□□□ 0.47
TPM3-205ENST00000328159 RASEFQ8IZ41 740 aa18■□□□□ 0.47
TPM3-205ENST00000328159 KBTBD3Q8NAB2 608 aa18■□□□□ 0.47
TPM3-205ENST00000328159 XAGE2Q96GT9 111 aa18■□□□□ 0.47
TPM3-205ENST00000328159 RGL2O15211 777 aa17.99■□□□□ 0.47
TPM3-205ENST00000328159 ADORA1P30542 326 aa17.99■□□□□ 0.47
TPM3-205ENST00000328159 ATP2B3Q16720 1220 aa17.99■□□□□ 0.47
TPM3-205ENST00000328159 CCDC158Q5M9N0 1113 aa17.99■□□□□ 0.47
TPM3-205ENST00000328159 GORABQ5T7V8 394 aa17.99■□□□□ 0.47
TPM3-205ENST00000328159 TICAM2Q86XR7 235 aa17.99■□□□□ 0.47
TPM3-205ENST00000328159 MAP4K1Q92918 833 aa17.99■□□□□ 0.47
TPM3-205ENST00000328159 KCNB2Q92953 911 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms