RNA–Protein interactions for RNA: ENST00000327047.5

CLRN1-202, Transcript of clarin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN1, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-202ENST00000327047 TRIM5Q9C035 493 aa8.72□□□□□ -1.01
CLRN1-202ENST00000327047 WWC3Q9ULE0 1092 aa8.72□□□□□ -1.01
CLRN1-202ENST00000327047 ANKARQ7Z5J8 1434 aa8.72□□□□□ -1.01
CLRN1-202ENST00000327047 NPHP1O15259 732 aa8.71□□□□□ -1.01
CLRN1-202ENST00000327047 ZSCAN25Q6NSZ9 544 aa8.71□□□□□ -1.01
CLRN1-202ENST00000327047 FAM200AQ8TCP9 573 aa8.71□□□□□ -1.01
CLRN1-202ENST00000327047 RTF1Q92541 710 aaKnown RBP8.71□□□□□ -1.01
CLRN1-202ENST00000327047 OSBPL3Q9H4L5 887 aa8.71□□□□□ -1.01
CLRN1-202ENST00000327047 KIF24Q5T7B8 1368 aa8.71□□□□□ -1.01
CLRN1-202ENST00000327047 PIK3C2AO00443 1686 aa8.71□□□□□ -1.02
CLRN1-202ENST00000327047 CHL1O00533 1208 aa8.71□□□□□ -1.02
CLRN1-202ENST00000327047 HMMRO75330 724 aa8.71□□□□□ -1.02
CLRN1-202ENST00000327047 CAPN2P17655 700 aa8.71□□□□□ -1.02
CLRN1-202ENST00000327047 PDE4DQ08499 809 aa8.71□□□□□ -1.02
CLRN1-202ENST00000327047 RBM26Q5T8P6 1007 aaKnown RBP8.71□□□□□ -1.02
CLRN1-202ENST00000327047 CEP135Q66GS9 1140 aa8.71□□□□□ -1.02
CLRN1-202ENST00000327047 SLC4A10Q6U841 1118 aa8.71□□□□□ -1.02
CLRN1-202ENST00000327047 CKAP2LQ8IYA6 745 aa8.71□□□□□ -1.02
CLRN1-202ENST00000327047 NGDNQ8NEJ9 315 aaKnown RBP8.71□□□□□ -1.02
CLRN1-202ENST00000327047 ZNF397Q8NF99 534 aaPredicted RBP8.71□□□□□ -1.02
CLRN1-202ENST00000327047 DNAJC2Q99543 621 aaKnown RBP8.71□□□□□ -1.02
CLRN1-202ENST00000327047 IL25Q9H293 177 aa8.71□□□□□ -1.02
CLRN1-202ENST00000327047 ZNF215Q9UL58 517 aaPredicted RBP8.71□□□□□ -1.02
CLRN1-202ENST00000327047 SMC3Q9UQE7 1217 aa8.71□□□□□ -1.02
CLRN1-202ENST00000327047 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.7□□□□□ -1.02
CLRN1-202ENST00000327047 EZH2Q15910 746 aaKnown RBP8.7□□□□□ -1.02
CLRN1-202ENST00000327047 ZFP91Q96JP5 570 aaPredicted RBP8.7□□□□□ -1.02
CLRN1-202ENST00000327047 ATP6V1DQ9Y5K8 247 aa8.7□□□□□ -1.02
CLRN1-202ENST00000327047 MRVI1Q9Y6F6 885 aa8.7□□□□□ -1.02
CLRN1-202ENST00000327047 KDRP35968 1356 aa8.7□□□□□ -1.02
CLRN1-202ENST00000327047 ABCA3Q99758 1704 aa8.7□□□□□ -1.02
CLRN1-202ENST00000327047 SOX12O15370 315 aa8.7□□□□□ -1.02
CLRN1-202ENST00000327047 HMGB1P09429 215 aaKnown RBP8.7□□□□□ -1.02
CLRN1-202ENST00000327047 AK2P54819 239 aa8.7□□□□□ -1.02
CLRN1-202ENST00000327047 TYRO3Q06418 890 aa8.7□□□□□ -1.02
CLRN1-202ENST00000327047 LMOD3Q0VAK6 560 aa8.7□□□□□ -1.02
CLRN1-202ENST00000327047 ELF2Q15723 593 aa8.7□□□□□ -1.02
CLRN1-202ENST00000327047 ANO6Q4KMQ2 910 aa8.7□□□□□ -1.02
CLRN1-202ENST00000327047 FBXO38Q6PIJ6 1188 aa8.7□□□□□ -1.02
CLRN1-202ENST00000327047 EYA1Q99502 592 aa8.7□□□□□ -1.02
CLRN1-202ENST00000327047 CALCOCO1Q9P1Z2 691 aa8.7□□□□□ -1.02
CLRN1-202ENST00000327047 SBNO1A3KN83 1393 aa8.7□□□□□ -1.02
CLRN1-202ENST00000327047 CRB1P82279 1406 aa8.69□□□□□ -1.02
CLRN1-202ENST00000327047 FMN2Q9NZ56 1722 aa8.69□□□□□ -1.02
CLRN1-202ENST00000327047 C1orf167Q5SNV9 1468 aa8.69□□□□□ -1.02
CLRN1-202ENST00000327047 VPS37CA5D8V6 355 aaPredicted RBP8.69□□□□□ -1.02
CLRN1-202ENST00000327047 USP27XA6NNY8 438 aa8.69□□□□□ -1.02
CLRN1-202ENST00000327047 FOXO3O43524 673 aa8.69□□□□□ -1.02
CLRN1-202ENST00000327047 MAP4K4O95819 1239 aaPredicted RBP8.69□□□□□ -1.02
CLRN1-202ENST00000327047 CPA1P15085 419 aa8.69□□□□□ -1.02
CLRN1-202ENST00000327047 MAP3K11Q16584 847 aa8.69□□□□□ -1.02
CLRN1-202ENST00000327047 CACTINQ8WUQ7 758 aaKnown RBP8.69□□□□□ -1.02
CLRN1-202ENST00000327047 AK7Q96M32 723 aa8.69□□□□□ -1.02
CLRN1-202ENST00000327047 TRIM34Q9BYJ4 488 aa8.69□□□□□ -1.02
CLRN1-202ENST00000327047 CBX8Q9HC52 389 aa8.69□□□□□ -1.02
CLRN1-202ENST00000327047 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.69□□□□□ -1.02
CLRN1-202ENST00000327047 ARHGEF10O15013 1369 aa8.69□□□□□ -1.02
CLRN1-202ENST00000327047 F6X3S4 739 aa8.69□□□□□ -1.02
CLRN1-202ENST00000327047 TRIM66O15016 1216 aa8.69□□□□□ -1.02
CLRN1-202ENST00000327047 GJB2P29033 226 aa8.69□□□□□ -1.02
CLRN1-202ENST00000327047 ZNF75DP51815 510 aa8.69□□□□□ -1.02
CLRN1-202ENST00000327047 MTHFSDQ2M296 383 aaKnown RBP8.69□□□□□ -1.02
CLRN1-202ENST00000327047 RUFY3Q7L099 469 aa8.69□□□□□ -1.02
CLRN1-202ENST00000327047 MCM10Q7L590 875 aa8.69□□□□□ -1.02
CLRN1-202ENST00000327047 CCDC83Q8IWF9 413 aa8.69□□□□□ -1.02
CLRN1-202ENST00000327047 POM121Q96HA1 1249 aa8.69□□□□□ -1.02
CLRN1-202ENST00000327047 NUP62CLQ9H1M0 184 aa8.69□□□□□ -1.02
CLRN1-202ENST00000327047 CLIP2Q9UDT6 1046 aa8.69□□□□□ -1.02
CLRN1-202ENST00000327047 IGSF1Q8N6C5 1336 aa8.68□□□□□ -1.02
CLRN1-202ENST00000327047 FLT4P35916 1363 aa8.68□□□□□ -1.02
CLRN1-202ENST00000327047 LARGE1O95461 756 aa8.68□□□□□ -1.02
CLRN1-202ENST00000327047 LIG1P18858 919 aa8.68□□□□□ -1.02
CLRN1-202ENST00000327047 HSPA4P34932 840 aa8.68□□□□□ -1.02
CLRN1-202ENST00000327047 NLRP6P59044 892 aa8.68□□□□□ -1.02
CLRN1-202ENST00000327047 CCDC144BQ3MJ40 725 aa8.68□□□□□ -1.02
CLRN1-202ENST00000327047 CCDC144CPQ8IYA2 1237 aa8.68□□□□□ -1.02
CLRN1-202ENST00000327047 LRRCC1Q9C099 1032 aa8.68□□□□□ -1.02
CLRN1-202ENST00000327047 ADCY9O60503 1353 aa8.68□□□□□ -1.02
CLRN1-202ENST00000327047 TULP2O00295 520 aa8.68□□□□□ -1.02
CLRN1-202ENST00000327047 ARID5BQ14865 1188 aa8.68□□□□□ -1.02
CLRN1-202ENST00000327047 FAM173BQ6P4H8 233 aa8.68□□□□□ -1.02
CLRN1-202ENST00000327047 PLA2G4DQ86XP0 818 aa8.68□□□□□ -1.02
CLRN1-202ENST00000327047 CERS3Q8IU89 383 aa8.68□□□□□ -1.02
CLRN1-202ENST00000327047 GTF3C6Q969F1 213 aa8.68□□□□□ -1.02
CLRN1-202ENST00000327047 NOL10Q9BSC4 688 aaKnown RBP8.68□□□□□ -1.02
CLRN1-202ENST00000327047 TNMDQ9H2S6 317 aa8.68□□□□□ -1.02
CLRN1-202ENST00000327047 TRMT1Q9NXH9 659 aaKnown RBP8.68□□□□□ -1.02
CLRN1-202ENST00000327047 LIMCH1Q9UPQ0 1083 aa8.68□□□□□ -1.02
CLRN1-202ENST00000327047 HNRNPH2P55795 449 aaKnown RBP8.67□□□□□ -1.02
CLRN1-202ENST00000327047 PTPN14Q15678 1187 aa8.67□□□□□ -1.02
CLRN1-202ENST00000327047 NUTM2GQ5VZR2 741 aa8.67□□□□□ -1.02
CLRN1-202ENST00000327047 FERMT3Q86UX7 667 aa8.67□□□□□ -1.02
CLRN1-202ENST00000327047 MTMR6Q9Y217 621 aa8.67□□□□□ -1.02
CLRN1-202ENST00000327047 SNX14Q9Y5W7 946 aa8.67□□□□□ -1.02
CLRN1-202ENST00000327047 PXDNQ92626 1479 aa8.67□□□□□ -1.02
CLRN1-202ENST00000327047 RAD50Q92878 1312 aa8.67□□□□□ -1.02
CLRN1-202ENST00000327047 USP54Q70EL1 1684 aa8.67□□□□□ -1.02
CLRN1-202ENST00000327047 HOXC9P31274 260 aa8.66□□□□□ -1.02
CLRN1-202ENST00000327047 SLC20A2Q08357 652 aa8.66□□□□□ -1.02
CLRN1-202ENST00000327047 TTC6Q86TZ1 520 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms