RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 POLRMTO00411 1230 aaKnown RBP12.71□□□□□ -0.38
VIPAS39-201ENST00000327028 SURF6O75683 361 aaKnown RBP12.71□□□□□ -0.38
VIPAS39-201ENST00000327028 GTF2E1P29083 439 aaPredicted RBP12.71□□□□□ -0.38
VIPAS39-201ENST00000327028 CNBD1Q8NA66 436 aa12.71□□□□□ -0.38
VIPAS39-201ENST00000327028 RAB11FIP3O75154 756 aa12.7□□□□□ -0.38
VIPAS39-201ENST00000327028 FAM161AQ3B820 660 aa12.7□□□□□ -0.38
VIPAS39-201ENST00000327028 PA2G4Q9UQ80 394 aaKnown RBP12.7□□□□□ -0.38
VIPAS39-201ENST00000327028 SERPINB2P05120 415 aa12.7□□□□□ -0.38
VIPAS39-201ENST00000327028 PTPN12Q05209 780 aaKnown RBP12.7□□□□□ -0.38
VIPAS39-201ENST00000327028 ANKRD45Q5TZF3 282 aa12.7□□□□□ -0.38
VIPAS39-201ENST00000327028 CCDC57Q2TAC2 916 aa12.69□□□□□ -0.38
VIPAS39-201ENST00000327028 PRR5LQ6MZQ0 368 aa12.69□□□□□ -0.38
VIPAS39-201ENST00000327028 CHD1LQ86WJ1 897 aa12.69□□□□□ -0.38
VIPAS39-201ENST00000327028 NPHP1O15259 732 aa12.69□□□□□ -0.38
VIPAS39-201ENST00000327028 CCDC152Q4G0S7 254 aa12.69□□□□□ -0.38
VIPAS39-201ENST00000327028 ERC1Q8IUD2 1116 aa12.69□□□□□ -0.38
VIPAS39-201ENST00000327028 GREM2Q9H772 168 aa12.69□□□□□ -0.38
VIPAS39-201ENST00000327028 ST5P78524 1137 aa12.68□□□□□ -0.38
VIPAS39-201ENST00000327028 IFIT5Q13325 482 aaKnown RBP12.68□□□□□ -0.38
VIPAS39-201ENST00000327028 SF3B3Q15393 1217 aaKnown RBP12.68□□□□□ -0.38
VIPAS39-201ENST00000327028 LRRCC1Q9C099 1032 aa12.68□□□□□ -0.38
VIPAS39-201ENST00000327028 ZBTB47Q9UFB7 747 aaPredicted RBP12.68□□□□□ -0.38
VIPAS39-201ENST00000327028 MMP10P09238 476 aa12.68□□□□□ -0.38
VIPAS39-201ENST00000327028 ITGA6P23229 1130 aa12.68□□□□□ -0.38
VIPAS39-201ENST00000327028 G3BP1Q13283 466 aaKnown RBP eCLIP12.68□□□□□ -0.38
VIPAS39-201ENST00000327028 OS9Q13438 667 aaPredicted RBP12.68□□□□□ -0.38
VIPAS39-201ENST00000327028 MSL1Q68DK7 614 aa12.68□□□□□ -0.38
VIPAS39-201ENST00000327028 KLHDC4Q8TBB5 520 aa12.68□□□□□ -0.38
VIPAS39-201ENST00000327028 CCDC85AQ96PX6 553 aaPredicted RBP12.68□□□□□ -0.38
VIPAS39-201ENST00000327028 ANKRD18BA2A2Z9 1011 aa12.67□□□□□ -0.38
VIPAS39-201ENST00000327028 APBB1O00213 710 aa12.67□□□□□ -0.38
VIPAS39-201ENST00000327028 C3orf67Q6ZVT6 689 aa12.67□□□□□ -0.38
VIPAS39-201ENST00000327028 SLC16A10Q8TF71 515 aa12.67□□□□□ -0.38
VIPAS39-201ENST00000327028 KIF1BPQ96EK5 621 aa12.67□□□□□ -0.38
VIPAS39-201ENST00000327028 LNPKQ9C0E8 428 aa12.67□□□□□ -0.38
VIPAS39-201ENST00000327028 SIL1Q9H173 461 aa12.67□□□□□ -0.38
VIPAS39-201ENST00000327028 ANKRD31Q8N7Z5 1873 aa12.67□□□□□ -0.38
VIPAS39-201ENST00000327028 CIAO1O76071 339 aa12.67□□□□□ -0.38
VIPAS39-201ENST00000327028 ILDR2Q71H61 639 aa12.67□□□□□ -0.38
VIPAS39-201ENST00000327028 SKAP1Q86WV1 359 aa12.67□□□□□ -0.38
VIPAS39-201ENST00000327028 RHPN1Q8TCX5 695 aa12.67□□□□□ -0.38
VIPAS39-201ENST00000327028 NLRP3Q96P20 1036 aa12.67□□□□□ -0.38
VIPAS39-201ENST00000327028 FBXO3Q9UK99 471 aa12.67□□□□□ -0.38
VIPAS39-201ENST00000327028 PARP3Q9Y6F1 533 aa12.67□□□□□ -0.38
VIPAS39-201ENST00000327028 SPEF2Q9C093 1822 aa12.67□□□□□ -0.38
VIPAS39-201ENST00000327028 SMARCA5O60264 1052 aaPredicted RBP12.66□□□□□ -0.38
VIPAS39-201ENST00000327028 PDE4AP27815 886 aa12.66□□□□□ -0.38
VIPAS39-201ENST00000327028 TAF7LQ5H9L4 462 aa12.66□□□□□ -0.38
VIPAS39-201ENST00000327028 EYA2O00167 538 aa12.66□□□□□ -0.38
VIPAS39-201ENST00000327028 CCDC24Q8N4L8 307 aa12.66□□□□□ -0.38
VIPAS39-201ENST00000327028 ZNF594Q96JF6 807 aaPredicted RBP12.66□□□□□ -0.38
VIPAS39-201ENST00000327028 PDGFDQ9GZP0 370 aaPredicted RBP12.65□□□□□ -0.38
VIPAS39-201ENST00000327028 IL15P40933 162 aaPredicted RBP12.65□□□□□ -0.38
VIPAS39-201ENST00000327028 ATG9AQ7Z3C6 839 aa12.65□□□□□ -0.38
VIPAS39-201ENST00000327028 COL4A1P02462 1669 aa12.64□□□□□ -0.39
VIPAS39-201ENST00000327028 SASH1O94885 1247 aa12.64□□□□□ -0.39
VIPAS39-201ENST00000327028 RGS3P49796 1198 aa12.64□□□□□ -0.39
VIPAS39-201ENST00000327028 CDC5LQ99459 802 aaKnown RBP12.64□□□□□ -0.39
VIPAS39-201ENST00000327028 SEC31BQ9NQW1 1179 aa12.64□□□□□ -0.39
VIPAS39-201ENST00000327028 CRY2Q49AN0 593 aa12.63□□□□□ -0.39
VIPAS39-201ENST00000327028 PUS3Q9BZE2 481 aaKnown RBP12.63□□□□□ -0.39
VIPAS39-201ENST00000327028 IL1RAPL2Q9NP60 686 aa12.63□□□□□ -0.39
VIPAS39-201ENST00000327028 A0A1B0GUL6 1792 aa12.63□□□□□ -0.39
VIPAS39-201ENST00000327028 KLRG2A4D1S0 409 aaPredicted RBP12.63□□□□□ -0.39
VIPAS39-201ENST00000327028 LRRC24Q50LG9 513 aa12.63□□□□□ -0.39
VIPAS39-201ENST00000327028 BRIP1Q9BX63 1249 aa12.63□□□□□ -0.39
VIPAS39-201ENST00000327028 TAF1P21675 1872 aa12.63□□□□□ -0.39
VIPAS39-201ENST00000327028 COL11A2P13942 1736 aaPredicted RBP12.63□□□□□ -0.39
VIPAS39-201ENST00000327028 IGHMBP2P38935 993 aaKnown RBP12.62□□□□□ -0.39
VIPAS39-201ENST00000327028 R3HDM1Q15032 1099 aaKnown RBP12.62□□□□□ -0.39
VIPAS39-201ENST00000327028 LDHAL6AQ6ZMR3 332 aa12.62□□□□□ -0.39
VIPAS39-201ENST00000327028 SALL3Q9BXA9 1300 aa12.62□□□□□ -0.39
VIPAS39-201ENST00000327028 TFCP2Q12800 502 aa12.62□□□□□ -0.39
VIPAS39-201ENST00000327028 CLASRPQ8N2M8 674 aaKnown RBP12.62□□□□□ -0.39
VIPAS39-201ENST00000327028 CNNM1Q9NRU3 951 aa12.62□□□□□ -0.39
VIPAS39-201ENST00000327028 RIPOR2Q9Y4F9 1068 aa12.62□□□□□ -0.39
VIPAS39-201ENST00000327028 ZNF609O15014 1411 aa12.62□□□□□ -0.39
VIPAS39-201ENST00000327028 C10orf71Q711Q0 1435 aa12.62□□□□□ -0.39
VIPAS39-201ENST00000327028 DDX46Q7L014 1031 aaKnown RBP12.61□□□□□ -0.39
VIPAS39-201ENST00000327028 ANKRD18AQ8IVF6 992 aa12.61□□□□□ -0.39
VIPAS39-201ENST00000327028 C16orf71Q8IYS4 520 aaPredicted RBP12.61□□□□□ -0.39
VIPAS39-201ENST00000327028 GPR108Q9NPR9 543 aa12.61□□□□□ -0.39
VIPAS39-201ENST00000327028 PLEKHM2Q8IWE5 1019 aa12.61□□□□□ -0.39
VIPAS39-201ENST00000327028 OTUD7AQ8TE49 926 aaPredicted RBP12.61□□□□□ -0.39
VIPAS39-201ENST00000327028 RPGRQ92834 1020 aaKnown RBP12.61□□□□□ -0.39
VIPAS39-201ENST00000327028 MPHOSPH8Q99549 860 aa12.61□□□□□ -0.39
VIPAS39-201ENST00000327028 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.61□□□□□ -0.39
VIPAS39-201ENST00000327028 MTFR1LQ9H019 292 aa12.6□□□□□ -0.39
VIPAS39-201ENST00000327028 ARAP2Q8WZ64 1704 aa12.6□□□□□ -0.39
VIPAS39-201ENST00000327028 MROH5Q6ZUA9 1318 aa12.6□□□□□ -0.39
VIPAS39-201ENST00000327028 KIF13BQ9NQT8 1826 aa12.6□□□□□ -0.39
VIPAS39-201ENST00000327028 HOXA10P31260 410 aaPredicted RBP12.6□□□□□ -0.39
VIPAS39-201ENST00000327028 PDE6BP35913 854 aa12.6□□□□□ -0.39
VIPAS39-201ENST00000327028 TNNI3KQ59H18 835 aa12.6□□□□□ -0.39
VIPAS39-201ENST00000327028 AACSQ86V21 672 aa12.6□□□□□ -0.39
VIPAS39-201ENST00000327028 CEP126Q9P2H0 1117 aa12.6□□□□□ -0.39
VIPAS39-201ENST00000327028 FPGT-TNNI3KV9GXZ4 949 aa12.6□□□□□ -0.39
VIPAS39-201ENST00000327028 MX1P20591 662 aa12.59□□□□□ -0.39
VIPAS39-201ENST00000327028 GRAPQ13588 217 aa12.59□□□□□ -0.39
VIPAS39-201ENST00000327028 METTL24Q5JXM2 366 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms