RNA–Protein interactions for RNA: ENST00000325658.3

PPM1A-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1A, humanhuman

TSL 1 (best) BASIC

Gene PPM1A, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1A-202ENST00000325658 IFNL2Q8IZJ0 200 aa12.54□□□□□ -0.4
PPM1A-202ENST00000325658 CCDC34Q96HJ3 373 aa12.54□□□□□ -0.4
PPM1A-202ENST00000325658 SPATA32Q96LK8 384 aa12.54□□□□□ -0.4
PPM1A-202ENST00000325658 SAFBQ15424 915 aaKnown RBP eCLIP12.54□□□□□ -0.4
PPM1A-202ENST00000325658 ABCC4O15439 1325 aa12.54□□□□□ -0.4
PPM1A-202ENST00000325658 IQGAP3Q86VI3 1631 aa12.54□□□□□ -0.4
PPM1A-202ENST00000325658 KRT85P78386 507 aa12.54□□□□□ -0.4
PPM1A-202ENST00000325658 NCBP1Q09161 790 aaKnown RBP12.54□□□□□ -0.4
PPM1A-202ENST00000325658 LDHAL6AQ6ZMR3 332 aa12.54□□□□□ -0.4
PPM1A-202ENST00000325658 GTF3C6Q969F1 213 aa12.54□□□□□ -0.4
PPM1A-202ENST00000325658 CFAP74Q9C0B2 1584 aa12.54□□□□□ -0.4
PPM1A-202ENST00000325658 ARID5BQ14865 1188 aa12.53□□□□□ -0.4
PPM1A-202ENST00000325658 PCMTD1Q96MG8 357 aaPredicted RBP12.53□□□□□ -0.4
PPM1A-202ENST00000325658 PPP6R1Q9UPN7 881 aa12.53□□□□□ -0.4
PPM1A-202ENST00000325658 UNC13BO14795 1591 aa12.53□□□□□ -0.4
PPM1A-202ENST00000325658 ERCC6L2Q5T890 1561 aa12.53□□□□□ -0.4
PPM1A-202ENST00000325658 PDCP20941 246 aa12.53□□□□□ -0.4
PPM1A-202ENST00000325658 GABPB1Q06547 395 aaPredicted RBP12.53□□□□□ -0.4
PPM1A-202ENST00000325658 ARHGAP45Q92619 1136 aa12.53□□□□□ -0.4
PPM1A-202ENST00000325658 EDC3Q96F86 508 aaKnown RBP12.53□□□□□ -0.4
PPM1A-202ENST00000325658 SRRTQ9BXP5 876 aaKnown RBP12.53□□□□□ -0.4
PPM1A-202ENST00000325658 NAT10Q9H0A0 1025 aaKnown RBP12.53□□□□□ -0.4
PPM1A-202ENST00000325658 ZNF219Q9P2Y4 722 aaPredicted RBP12.53□□□□□ -0.4
PPM1A-202ENST00000325658 MICALL1Q8N3F8 863 aa12.52□□□□□ -0.4
PPM1A-202ENST00000325658 ESYT1Q9BSJ8 1104 aa12.52□□□□□ -0.4
PPM1A-202ENST00000325658 HYPKQ9NX55 129 aa12.52□□□□□ -0.4
PPM1A-202ENST00000325658 TIMM10P62072 90 aa12.52□□□□□ -0.4
PPM1A-202ENST00000325658 CCDC183Q5T5S1 534 aa12.52□□□□□ -0.4
PPM1A-202ENST00000325658 LARGE1O95461 756 aa12.52□□□□□ -0.41
PPM1A-202ENST00000325658 STARD3NLO95772 234 aa12.52□□□□□ -0.41
PPM1A-202ENST00000325658 SYT1P21579 422 aa12.52□□□□□ -0.41
PPM1A-202ENST00000325658 ATP8B2P98198 1209 aa12.52□□□□□ -0.41
PPM1A-202ENST00000325658 IFIT5Q13325 482 aaKnown RBP12.52□□□□□ -0.41
PPM1A-202ENST00000325658 CAGE1Q8TC20 777 aa12.52□□□□□ -0.41
PPM1A-202ENST00000325658 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.52□□□□□ -0.414e-7■□□□□ 9.3
PPM1A-202ENST00000325658 HIP1O00291 1037 aa12.52□□□□□ -0.41
PPM1A-202ENST00000325658 COL9A3Q14050 684 aaPredicted RBP12.52□□□□□ -0.41
PPM1A-202ENST00000325658 CCDC91Q7Z6B0 441 aa12.52□□□□□ -0.41
PPM1A-202ENST00000325658 MSH6P52701 1360 aa12.51□□□□□ -0.41
PPM1A-202ENST00000325658 POLR3DP05423 398 aaPredicted RBP12.51□□□□□ -0.41
PPM1A-202ENST00000325658 CEP135Q66GS9 1140 aa12.51□□□□□ -0.41
PPM1A-202ENST00000325658 JAG2Q9Y219 1238 aa12.51□□□□□ -0.41
PPM1A-202ENST00000325658 GRM8O00222 908 aa12.51□□□□□ -0.41
PPM1A-202ENST00000325658 CCP110O43303 1012 aa12.51□□□□□ -0.41
PPM1A-202ENST00000325658 GJB2P29033 226 aa12.51□□□□□ -0.41
PPM1A-202ENST00000325658 SSR1P43307 286 aaKnown RBP12.51□□□□□ -0.41
PPM1A-202ENST00000325658 KRBA2Q6ZNG9 492 aa12.51□□□□□ -0.41
PPM1A-202ENST00000325658 RASEFQ8IZ41 740 aa12.51□□□□□ -0.41
PPM1A-202ENST00000325658 ANKRD20A12PQ8NF67 263 aa12.51□□□□□ -0.41
PPM1A-202ENST00000325658 CCDC24Q8N4L8 307 aa12.5□□□□□ -0.41
PPM1A-202ENST00000325658 IL17REQ8NFR9 667 aa12.5□□□□□ -0.41
PPM1A-202ENST00000325658 BRF1Q92994 677 aa12.5□□□□□ -0.41
PPM1A-202ENST00000325658 NUP62CLQ9H1M0 184 aa12.5□□□□□ -0.41
PPM1A-202ENST00000325658 LIMCH1Q9UPQ0 1083 aa12.5□□□□□ -0.41
PPM1A-202ENST00000325658 ABCC1P33527 1531 aa12.5□□□□□ -0.41
PPM1A-202ENST00000325658 METP08581 1390 aa12.5□□□□□ -0.41
PPM1A-202ENST00000325658 BIN1O00499 593 aa12.5□□□□□ -0.41
PPM1A-202ENST00000325658 CHL1O00533 1208 aa12.5□□□□□ -0.41
PPM1A-202ENST00000325658 AIDAQ96BJ3 306 aa12.5□□□□□ -0.41
PPM1A-202ENST00000325658 SPTLC3Q9NUV7 552 aa12.5□□□□□ -0.41
PPM1A-202ENST00000325658 A1BGP04217 495 aa12.5□□□□□ -0.41
PPM1A-202ENST00000325658 SNRPA1P09661 255 aaKnown RBP12.5□□□□□ -0.41
PPM1A-202ENST00000325658 CAPN2P17655 700 aa12.5□□□□□ -0.41
PPM1A-202ENST00000325658 IKQ13123 557 aaPredicted RBP12.5□□□□□ -0.41
PPM1A-202ENST00000325658 PAXBP1Q9Y5B6 917 aa12.5□□□□□ -0.41
PPM1A-202ENST00000325658 NGLY1Q96IV0 654 aa12.49□□□□□ -0.41
PPM1A-202ENST00000325658 MYCBPQ99417 103 aaPredicted RBP12.49□□□□□ -0.41
PPM1A-202ENST00000325658 KIF2AO00139 706 aaPredicted RBP12.49□□□□□ -0.41
PPM1A-202ENST00000325658 NF2P35240 595 aa12.49□□□□□ -0.41
PPM1A-202ENST00000325658 SARNPP82979 210 aaKnown RBP12.49□□□□□ -0.41
PPM1A-202ENST00000325658 ABCA6Q8N139 1617 aa12.49□□□□□ -0.41
PPM1A-202ENST00000325658 SHTN1A0MZ66 631 aa12.49□□□□□ -0.41
PPM1A-202ENST00000325658 PRAMEF22A3QJZ6 481 aa12.49□□□□□ -0.41
PPM1A-202ENST00000325658 EXOC5O00471 708 aa12.49□□□□□ -0.41
PPM1A-202ENST00000325658 CHMLP26374 656 aa12.49□□□□□ -0.41
PPM1A-202ENST00000325658 ZNF397Q8NF99 534 aaPredicted RBP12.49□□□□□ -0.41
PPM1A-202ENST00000325658 ZNF594Q96JF6 807 aaPredicted RBP12.49□□□□□ -0.41
PPM1A-202ENST00000325658 CLIP2Q9UDT6 1046 aa12.49□□□□□ -0.41
PPM1A-202ENST00000325658 ATP7AQ04656 1500 aa12.49□□□□□ -0.41
PPM1A-202ENST00000325658 FLT4P35916 1363 aa12.48□□□□□ -0.41
PPM1A-202ENST00000325658 PIK3R4Q99570 1358 aa12.48□□□□□ -0.41
PPM1A-202ENST00000325658 A0A1B0GUL7 405 aa12.48□□□□□ -0.41
PPM1A-202ENST00000325658 USP27XA6NNY8 438 aa12.48□□□□□ -0.41
PPM1A-202ENST00000325658 LIG1P18858 919 aa12.48□□□□□ -0.41
PPM1A-202ENST00000325658 CUL4AQ13619 759 aa12.48□□□□□ -0.41
PPM1A-202ENST00000325658 RNF187Q5TA31 235 aaPredicted RBP12.48□□□□□ -0.41
PPM1A-202ENST00000325658 KSR2Q6VAB6 950 aa12.48□□□□□ -0.41
PPM1A-202ENST00000325658 CCDC129Q6ZRS4 1044 aa12.48□□□□□ -0.41
PPM1A-202ENST00000325658 FAM89AQ96GI7 184 aa12.48□□□□□ -0.41
PPM1A-202ENST00000325658 STX6O43752 255 aa12.48□□□□□ -0.41
PPM1A-202ENST00000325658 AK2P54819 239 aa12.48□□□□□ -0.41
PPM1A-202ENST00000325658 HSP90AA4PQ58FG1 418 aa12.48□□□□□ -0.41
PPM1A-202ENST00000325658 BICC1Q9H694 974 aaKnown RBP12.48□□□□□ -0.41
PPM1A-202ENST00000325658 RBM8AQ9Y5S9 174 aaKnown RBP12.48□□□□□ -0.41
PPM1A-202ENST00000325658 AMOTL1Q8IY63 956 aa12.48□□□□□ -0.41
PPM1A-202ENST00000325658 MAP3K11Q16584 847 aa12.47□□□□□ -0.41
PPM1A-202ENST00000325658 MICU3Q86XE3 530 aa12.47□□□□□ -0.41
PPM1A-202ENST00000325658 ZCRB1Q8TBF4 217 aaKnown RBP12.47□□□□□ -0.41
PPM1A-202ENST00000325658 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.47□□□□□ -0.41
PPM1A-202ENST00000325658 ZSWIM4Q9H7M6 989 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms