RNA–Protein interactions for RNA: ENST00000325083.12

PCM1-201, Transcript of pericentriolar material 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCM1, Length 6,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-201ENST00000325083 SMC6Q96SB8 1091 aa16.09■□□□□ 0.17
PCM1-201ENST00000325083 ORC3Q9UBD5 711 aaPredicted RBP16.09■□□□□ 0.17
PCM1-201ENST00000325083 GOLGA6L9A6NEM1 432 aa16.08■□□□□ 0.17
PCM1-201ENST00000325083 AKR1B10O60218 316 aa16.08■□□□□ 0.17
PCM1-201ENST00000325083 FCHSD2O94868 740 aa16.08■□□□□ 0.17
PCM1-201ENST00000325083 CCDC129Q6ZRS4 1044 aa16.08■□□□□ 0.17
PCM1-201ENST00000325083 GAPVD1Q14C86 1478 aa16.08■□□□□ 0.17
PCM1-201ENST00000325083 MICALL1Q8N3F8 863 aa16.08■□□□□ 0.16
PCM1-201ENST00000325083 ANKS4BQ8N8V4 417 aa16.08■□□□□ 0.16
PCM1-201ENST00000325083 EVI5LQ96CN4 794 aa16.08■□□□□ 0.16
PCM1-201ENST00000325083 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.08■□□□□ 0.162e-7■■□□□ 13.2
PCM1-201ENST00000325083 TTC36A6NLP5 189 aa16.08■□□□□ 0.16
PCM1-201ENST00000325083 ATP2B3Q16720 1220 aa16.08■□□□□ 0.16
PCM1-201ENST00000325083 CCDC25Q86WR0 208 aa16.08■□□□□ 0.16
PCM1-201ENST00000325083 RPUSD2Q8IZ73 545 aaKnown RBP16.08■□□□□ 0.16
PCM1-201ENST00000325083 KCNK9Q9NPC2 374 aa16.08■□□□□ 0.16
PCM1-201ENST00000325083 RMND1Q9NWS8 449 aa16.08■□□□□ 0.16
PCM1-201ENST00000325083 ZBTB21Q9ULJ3 1066 aa16.08■□□□□ 0.16
PCM1-201ENST00000325083 ATP5J2-PTCD1G3V325 749 aa16.07■□□□□ 0.16
PCM1-201ENST00000325083 BAG3O95817 575 aa16.07■□□□□ 0.16
PCM1-201ENST00000325083 PICALMQ13492 652 aa16.07■□□□□ 0.16
PCM1-201ENST00000325083 FAM13AO94988 1023 aa16.07■□□□□ 0.16
PCM1-201ENST00000325083 SYKP43405 635 aa16.07■□□□□ 0.16
PCM1-201ENST00000325083 DNAJC21Q5F1R6 531 aaKnown RBP16.07■□□□□ 0.16
PCM1-201ENST00000325083 IFIT1BQ5T764 474 aaKnown RBP16.07■□□□□ 0.16
PCM1-201ENST00000325083 CCDC102BQ68D86 513 aa16.07■□□□□ 0.16
PCM1-201ENST00000325083 CCDC65Q8IXS2 484 aa16.07■□□□□ 0.16
PCM1-201ENST00000325083 LRRC27Q9C0I9 530 aa16.07■□□□□ 0.16
PCM1-201ENST00000325083 EHBP1Q8NDI1 1231 aa16.07■□□□□ 0.16
PCM1-201ENST00000325083 CCDC114Q96M63 670 aa16.07■□□□□ 0.16
PCM1-201ENST00000325083 SEC62Q99442 399 aaKnown RBP16.07■□□□□ 0.16
PCM1-201ENST00000325083 PLVAPQ9BX97 442 aa16.07■□□□□ 0.16
PCM1-201ENST00000325083 SLU7O95391 586 aaKnown RBP16.07■□□□□ 0.16
PCM1-201ENST00000325083 SNX16P57768 344 aa16.07■□□□□ 0.16
PCM1-201ENST00000325083 PLCB3Q01970 1234 aa16.07■□□□□ 0.16
PCM1-201ENST00000325083 NAA25Q14CX7 972 aa16.07■□□□□ 0.16
PCM1-201ENST00000325083 ANO6Q4KMQ2 910 aa16.06■□□□□ 0.16
PCM1-201ENST00000325083 DDX46Q7L014 1031 aaKnown RBP16.06■□□□□ 0.16
PCM1-201ENST00000325083 NEK1Q96PY6 1258 aa16.06■□□□□ 0.16
PCM1-201ENST00000325083 NCOA2Q15596 1464 aa16.06■□□□□ 0.16
PCM1-201ENST00000325083 CEP57Q86XR8 500 aa16.06■□□□□ 0.16
PCM1-201ENST00000325083 NCOA7Q8NI08 942 aa16.06■□□□□ 0.16
PCM1-201ENST00000325083 NUDT16Q96DE0 195 aaKnown RBP16.06■□□□□ 0.16
PCM1-201ENST00000325083 LRRC2Q9BYS8 371 aa16.06■□□□□ 0.16
PCM1-201ENST00000325083 SIRT1Q96EB6 747 aa16.06■□□□□ 0.16
PCM1-201ENST00000325083 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.06■□□□□ 0.165e-14■□□□□ 9.8
PCM1-201ENST00000325083 V9GYY5 206 aaPredicted RBP16.06■□□□□ 0.16
PCM1-201ENST00000325083 CYLC1P35663 651 aaPredicted RBP16.06■□□□□ 0.16
PCM1-201ENST00000325083 ZNF165P49910 485 aa16.06■□□□□ 0.16
PCM1-201ENST00000325083 CFAP157Q5JU67 520 aa16.06■□□□□ 0.16
PCM1-201ENST00000325083 NECAB1Q8N987 351 aa16.06■□□□□ 0.16
PCM1-201ENST00000325083 PYM1Q9BRP8 204 aaKnown RBP16.06■□□□□ 0.16
PCM1-201ENST00000325083 SLFN5Q08AF3 891 aa16.05■□□□□ 0.16
PCM1-201ENST00000325083 SPAG5Q96R06 1193 aa16.05■□□□□ 0.16
PCM1-201ENST00000325083 ZSCAN23Q3MJ62 389 aa16.05■□□□□ 0.16
PCM1-201ENST00000325083 PAXBP1Q9Y5B6 917 aa16.05■□□□□ 0.16
PCM1-201ENST00000325083 CRCPO75575 148 aa16.05■□□□□ 0.16
PCM1-201ENST00000325083 STX8Q9UNK0 236 aa16.05■□□□□ 0.16
PCM1-201ENST00000325083 UAP1Q16222 522 aaPredicted RBP16.05■□□□□ 0.16
PCM1-201ENST00000325083 ERMNQ8TAM6 284 aa16.05■□□□□ 0.16
PCM1-201ENST00000325083 IFT81Q8WYA0 676 aa16.05■□□□□ 0.16
PCM1-201ENST00000325083 MAK16Q9BXY0 300 aaKnown RBP16.05■□□□□ 0.16
PCM1-201ENST00000325083 CWC25Q9NXE8 425 aaPredicted RBP16.05■□□□□ 0.16
PCM1-201ENST00000325083 TXNDC16Q9P2K2 825 aa16.05■□□□□ 0.16
PCM1-201ENST00000325083 CCDC121Q6ZUS5 278 aa16.05■□□□□ 0.16
PCM1-201ENST00000325083 CLEC11AQ9Y240 323 aa16.05■□□□□ 0.16
PCM1-201ENST00000325083 LRRC9Q6ZRR7 1453 aa16.04■□□□□ 0.16
PCM1-201ENST00000325083 FAM160A1Q05DH4 1040 aa16.04■□□□□ 0.16
PCM1-201ENST00000325083 CTAGE15A4D2H0 777 aa16.04■□□□□ 0.16
PCM1-201ENST00000325083 CTAGE8P0CG41 777 aa16.04■□□□□ 0.16
PCM1-201ENST00000325083 ST5P78524 1137 aa16.04■□□□□ 0.16
PCM1-201ENST00000325083 WTAPQ15007 396 aa16.04■□□□□ 0.16
PCM1-201ENST00000325083 CTAGE6Q86UF2 777 aa16.04■□□□□ 0.16
PCM1-201ENST00000325083 CTAGE4Q8IX94 777 aa16.04■□□□□ 0.16
PCM1-201ENST00000325083 SATB1Q01826 763 aa16.04■□□□□ 0.16
PCM1-201ENST00000325083 DNAI1Q9UI46 699 aa16.04■□□□□ 0.16
PCM1-201ENST00000325083 TAF12Q16514 161 aa16.04■□□□□ 0.16
PCM1-201ENST00000325083 SEPT14Q6ZU15 432 aa16.04■□□□□ 0.16
PCM1-201ENST00000325083 KCNH5Q8NCM2 988 aa16.04■□□□□ 0.16
PCM1-201ENST00000325083 CRNKL1Q9BZJ0 848 aaKnown RBP16.04■□□□□ 0.16
PCM1-201ENST00000325083 PFDN4Q9NQP4 134 aa16.04■□□□□ 0.16
PCM1-201ENST00000325083 CTAGE9A4FU28 777 aa16.03■□□□□ 0.16
PCM1-201ENST00000325083 ERCC5P28715 1186 aaPredicted RBP16.03■□□□□ 0.16
PCM1-201ENST00000325083 RFC4P35249 363 aa16.03■□□□□ 0.16
PCM1-201ENST00000325083 RASA3Q14644 834 aa16.03■□□□□ 0.16
PCM1-201ENST00000325083 STMN4Q9H169 189 aaPredicted RBP16.03■□□□□ 0.16
PCM1-201ENST00000325083 FAM169AQ9Y6X4 670 aa16.03■□□□□ 0.16
PCM1-201ENST00000325083 CLGNO14967 610 aa16.03■□□□□ 0.16
PCM1-201ENST00000325083 MARCKSP29966 332 aaPredicted RBP16.03■□□□□ 0.16
PCM1-201ENST00000325083 FLIIQ13045 1269 aa16.03■□□□□ 0.16
PCM1-201ENST00000325083 LDHAL6AQ6ZMR3 332 aa16.03■□□□□ 0.16
PCM1-201ENST00000325083 CNPY2Q9Y2B0 182 aa16.03■□□□□ 0.16
PCM1-201ENST00000325083 OPA1O60313 960 aa16.03■□□□□ 0.16
PCM1-201ENST00000325083 ZEB2O60315 1214 aa16.03■□□□□ 0.16
PCM1-201ENST00000325083 GEN1Q17RS7 908 aa16.03■□□□□ 0.16
PCM1-201ENST00000325083 C20orf194Q5TEA3 1177 aa16.03■□□□□ 0.16
PCM1-201ENST00000325083 WAPLQ7Z5K2 1190 aa16.03■□□□□ 0.16
PCM1-201ENST00000325083 SEPT6Q14141 434 aa16.03■□□□□ 0.16
PCM1-201ENST00000325083 PPP1R7Q15435 360 aa16.03■□□□□ 0.16
PCM1-201ENST00000325083 EPSTI1Q96J88 318 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms