RNA–Protein interactions for RNA: ENST00000324616.9

C12orf40-201, Transcript of chromosome 12 open reading frame 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C12orf40, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40-201ENST00000324616 SLC4A9Q96Q91 983 aa12.91□□□□□ -0.34
C12orf40-201ENST00000324616 TM6SF1Q9BZW5 370 aa12.91□□□□□ -0.34
C12orf40-201ENST00000324616 TAF6LQ9Y6J9 622 aa12.91□□□□□ -0.34
C12orf40-201ENST00000324616 RPAP1Q9BWH6 1393 aaPredicted RBP12.91□□□□□ -0.34
C12orf40-201ENST00000324616 PRPF40AO75400 957 aaKnown RBP12.91□□□□□ -0.34
C12orf40-201ENST00000324616 DNAJC2Q99543 621 aaKnown RBP12.91□□□□□ -0.34
C12orf40-201ENST00000324616 HAUS7Q99871 368 aa12.91□□□□□ -0.34
C12orf40-201ENST00000324616 CCDC9Q9Y3X0 531 aaKnown RBP12.91□□□□□ -0.34
C12orf40-201ENST00000324616 ZNF609O15014 1411 aa12.9□□□□□ -0.34
C12orf40-201ENST00000324616 LAMA4Q16363 1823 aa12.9□□□□□ -0.34
C12orf40-201ENST00000324616 SLC27A2O14975 620 aa12.9□□□□□ -0.34
C12orf40-201ENST00000324616 KCNJ4P48050 445 aa12.9□□□□□ -0.34
C12orf40-201ENST00000324616 VPS53Q5VIR6 699 aa12.9□□□□□ -0.34
C12orf40-201ENST00000324616 GRPEL1Q9HAV7 217 aa12.9□□□□□ -0.34
C12orf40-201ENST00000324616 RTN4Q9NQC3 1192 aaKnown RBP12.9□□□□□ -0.34
C12orf40-201ENST00000324616 MRE11P49959 708 aa12.9□□□□□ -0.34
C12orf40-201ENST00000324616 TIMM10P62072 90 aa12.9□□□□□ -0.34
C12orf40-201ENST00000324616 GPT2Q8TD30 523 aa12.9□□□□□ -0.34
C12orf40-201ENST00000324616 PUS3Q9BZE2 481 aaKnown RBP12.9□□□□□ -0.34
C12orf40-201ENST00000324616 PDRG1Q9NUG6 133 aa12.9□□□□□ -0.34
C12orf40-201ENST00000324616 NRAPQ86VF7 1730 aa12.89□□□□□ -0.35
C12orf40-201ENST00000324616 EYA2O00167 538 aa12.89□□□□□ -0.35
C12orf40-201ENST00000324616 TAF5LO75529 589 aa12.89□□□□□ -0.35
C12orf40-201ENST00000324616 ZKSCAN1P17029 563 aaPredicted RBP12.89□□□□□ -0.35
C12orf40-201ENST00000324616 DDX46Q7L014 1031 aaKnown RBP12.89□□□□□ -0.35
C12orf40-201ENST00000324616 TEX13AQ9BXU3 409 aaPredicted RBP12.89□□□□□ -0.35
C12orf40-201ENST00000324616 CYP46A1Q9Y6A2 500 aa12.89□□□□□ -0.35
C12orf40-201ENST00000324616 IL15P40933 162 aaPredicted RBP12.89□□□□□ -0.35
C12orf40-201ENST00000324616 NEUROD6Q96NK8 337 aa12.89□□□□□ -0.35
C12orf40-201ENST00000324616 SEC62Q99442 399 aaKnown RBP12.89□□□□□ -0.35
C12orf40-201ENST00000324616 RFX7Q2KHR2 1363 aa12.88□□□□□ -0.35
C12orf40-201ENST00000324616 DTNBO60941 627 aa12.88□□□□□ -0.35
C12orf40-201ENST00000324616 STARD3NLO95772 234 aa12.88□□□□□ -0.35
C12orf40-201ENST00000324616 TRIM28Q13263 835 aaKnown RBP12.88□□□□□ -0.35
C12orf40-201ENST00000324616 FAM89AQ96GI7 184 aa12.88□□□□□ -0.35
C12orf40-201ENST00000324616 GPR108Q9NPR9 543 aa12.88□□□□□ -0.35
C12orf40-201ENST00000324616 ISY1Q9ULR0 285 aaKnown RBP12.88□□□□□ -0.35
C12orf40-201ENST00000324616 ST3GAL1Q11201 340 aa12.88□□□□□ -0.35
C12orf40-201ENST00000324616 HLFQ16534 295 aa12.88□□□□□ -0.35
C12orf40-201ENST00000324616 CAVIN1Q6NZI2 390 aaKnown RBP12.88□□□□□ -0.35
C12orf40-201ENST00000324616 KIF6Q6ZMV9 814 aa12.88□□□□□ -0.35
C12orf40-201ENST00000324616 CCDC129Q6ZRS4 1044 aa12.88□□□□□ -0.35
C12orf40-201ENST00000324616 SPEF2Q9C093 1822 aa12.88□□□□□ -0.35
C12orf40-201ENST00000324616 MAP3K15Q6ZN16 1313 aa12.87□□□□□ -0.35
C12orf40-201ENST00000324616 PHLPP1O60346 1717 aa12.87□□□□□ -0.35
C12orf40-201ENST00000324616 CIAO1O76071 339 aa12.87□□□□□ -0.35
C12orf40-201ENST00000324616 CYP19A1P11511 503 aaPredicted RBP12.87□□□□□ -0.35
C12orf40-201ENST00000324616 NCLP19338 710 aaKnown RBP12.87□□□□□ -0.35
C12orf40-201ENST00000324616 SYNE4Q8N205 404 aa12.87□□□□□ -0.35
C12orf40-201ENST00000324616 NSFL1CQ9UNZ2 370 aaKnown RBP12.87□□□□□ -0.35
C12orf40-201ENST00000324616 EXOC5O00471 708 aa12.87□□□□□ -0.35
C12orf40-201ENST00000324616 SYTL4Q96C24 671 aaPredicted RBP12.87□□□□□ -0.35
C12orf40-201ENST00000324616 CCDC85AQ96PX6 553 aaPredicted RBP12.87□□□□□ -0.35
C12orf40-201ENST00000324616 A0A1B0GUL7 405 aa12.86□□□□□ -0.35
C12orf40-201ENST00000324616 PCCAP05165 728 aaPredicted RBP12.86□□□□□ -0.35
C12orf40-201ENST00000324616 ME3Q16798 604 aa12.86□□□□□ -0.35
C12orf40-201ENST00000324616 FOXD4L6Q3SYB3 417 aaPredicted RBP12.86□□□□□ -0.35
C12orf40-201ENST00000324616 SLFNL1Q499Z3 407 aa12.86□□□□□ -0.35
C12orf40-201ENST00000324616 USPL1Q5W0Q7 1092 aa12.86□□□□□ -0.35
C12orf40-201ENST00000324616 FOXD4L3Q6VB84 417 aaPredicted RBP12.86□□□□□ -0.35
C12orf40-201ENST00000324616 GIGYF2Q6Y7W6 1299 aaKnown RBP12.86□□□□□ -0.35
C12orf40-201ENST00000324616 CCDC83Q8IWF9 413 aa12.86□□□□□ -0.35
C12orf40-201ENST00000324616 KBTBD3Q8NAB2 608 aa12.86□□□□□ -0.35
C12orf40-201ENST00000324616 TCEANC2Q96MN5 208 aa12.86□□□□□ -0.35
C12orf40-201ENST00000324616 ZBTB1Q9Y2K1 713 aa12.86□□□□□ -0.35
C12orf40-201ENST00000324616 MYH7P12883 1935 aa12.86□□□□□ -0.35
C12orf40-201ENST00000324616 PALLDQ8WX93 1383 aa12.86□□□□□ -0.35
C12orf40-201ENST00000324616 WDR33Q9C0J8 1336 aaKnown RBP12.86□□□□□ -0.35
C12orf40-201ENST00000324616 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.86□□□□□ -0.35
C12orf40-201ENST00000324616 LTBP4Q8N2S1 1624 aa12.86□□□□□ -0.35
C12orf40-201ENST00000324616 GOLIM4O00461 696 aa12.86□□□□□ -0.35
C12orf40-201ENST00000324616 GPTP24298 496 aa12.86□□□□□ -0.35
C12orf40-201ENST00000324616 ZSCAN23Q3MJ62 389 aa12.86□□□□□ -0.35
C12orf40-201ENST00000324616 RNF20Q5VTR2 975 aa12.86□□□□□ -0.35
C12orf40-201ENST00000324616 ZBTB38Q8NAP3 1195 aaPredicted RBP12.86□□□□□ -0.35
C12orf40-201ENST00000324616 PAG1Q9NWQ8 432 aa12.86□□□□□ -0.35
C12orf40-201ENST00000324616 RBM27Q9P2N5 1060 aaKnown RBP12.86□□□□□ -0.35
C12orf40-201ENST00000324616 TPCN1Q9ULQ1 816 aa12.86□□□□□ -0.35
C12orf40-201ENST00000324616 SYT1P21579 422 aa12.85□□□□□ -0.35
C12orf40-201ENST00000324616 CCDC57Q2TAC2 916 aa12.85□□□□□ -0.35
C12orf40-201ENST00000324616 PLA2G12BQ9BX93 195 aa12.85□□□□□ -0.35
C12orf40-201ENST00000324616 MYO5AQ9Y4I1 1855 aaKnown RBP12.85□□□□□ -0.35
C12orf40-201ENST00000324616 CSF1RP07333 972 aa12.85□□□□□ -0.35
C12orf40-201ENST00000324616 PSMA5P28066 241 aa12.85□□□□□ -0.35
C12orf40-201ENST00000324616 PRIM1P49642 420 aaKnown RBP12.85□□□□□ -0.35
C12orf40-201ENST00000324616 TSGA10IPQ3SY00 556 aa12.85□□□□□ -0.35
C12orf40-201ENST00000324616 MCMDC2Q4G0Z9 681 aa12.85□□□□□ -0.35
C12orf40-201ENST00000324616 NLRP10Q86W26 655 aa12.85□□□□□ -0.35
C12orf40-201ENST00000324616 NECAB1Q8N987 351 aa12.85□□□□□ -0.35
C12orf40-201ENST00000324616 SH2B1Q9NRF2 756 aaPredicted RBP12.85□□□□□ -0.35
C12orf40-201ENST00000324616 SMC3Q9UQE7 1217 aa12.85□□□□□ -0.35
C12orf40-201ENST00000324616 AKAP11Q9UKA4 1901 aa12.85□□□□□ -0.35
C12orf40-201ENST00000324616 SH3TC1Q8TE82 1336 aa12.84□□□□□ -0.35
C12orf40-201ENST00000324616 RPS6KB1P23443 525 aa12.84□□□□□ -0.35
C12orf40-201ENST00000324616 ZNF445P59923 1031 aa12.84□□□□□ -0.35
C12orf40-201ENST00000324616 BLOC1S2Q6QNY1 142 aa12.84□□□□□ -0.35
C12orf40-201ENST00000324616 ZSCAN31Q96LW9 406 aaPredicted RBP12.84□□□□□ -0.35
C12orf40-201ENST00000324616 GDPD2Q9HCC8 539 aa12.84□□□□□ -0.35
C12orf40-201ENST00000324616 HMG20BQ9P0W2 317 aa12.84□□□□□ -0.35
C12orf40-201ENST00000324616 MYH14Q7Z406 1995 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms