RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 VPS53Q5VIR6 699 aa9.3□□□□□ -0.92
RTL3-201ENST00000321110 ZNF622Q969S3 477 aaKnown RBP eCLIP9.3□□□□□ -0.92
RTL3-201ENST00000321110 ZSCAN31Q96LW9 406 aaPredicted RBP9.3□□□□□ -0.92
RTL3-201ENST00000321110 JAKMIP1Q96N16 626 aaKnown RBP9.3□□□□□ -0.92
RTL3-201ENST00000321110 TPCN1Q9ULQ1 816 aa9.3□□□□□ -0.92
RTL3-201ENST00000321110 PIK3C2BO00750 1634 aa9.3□□□□□ -0.92
RTL3-201ENST00000321110 BECN2A8MW95 431 aa9.3□□□□□ -0.92
RTL3-201ENST00000321110 EFCAB8A8MWE9 144 aa9.3□□□□□ -0.92
RTL3-201ENST00000321110 EIF3CLB5ME19 914 aaKnown RBP9.3□□□□□ -0.92
RTL3-201ENST00000321110 GNAI2P04899 355 aa9.3□□□□□ -0.92
RTL3-201ENST00000321110 COL9A3Q14050 684 aaPredicted RBP9.3□□□□□ -0.92
RTL3-201ENST00000321110 TRIM65Q6PJ69 517 aa9.3□□□□□ -0.92
RTL3-201ENST00000321110 G2E3Q7L622 706 aa9.3□□□□□ -0.92
RTL3-201ENST00000321110 NUTM1Q86Y26 1132 aa9.3□□□□□ -0.92
RTL3-201ENST00000321110 EIF3CQ99613 913 aaKnown RBP9.3□□□□□ -0.92
RTL3-201ENST00000321110 IL1RAPL2Q9NP60 686 aa9.3□□□□□ -0.92
RTL3-201ENST00000321110 PHLPP2Q6ZVD8 1323 aa9.3□□□□□ -0.92
RTL3-201ENST00000321110 POGZQ7Z3K3 1410 aa9.3□□□□□ -0.92
RTL3-201ENST00000321110 SLC4A2P04920 1241 aa9.29□□□□□ -0.92
RTL3-201ENST00000321110 IL13P35225 146 aa9.29□□□□□ -0.92
RTL3-201ENST00000321110 E2F4Q16254 413 aa9.29□□□□□ -0.92
RTL3-201ENST00000321110 STX1AQ16623 288 aa9.29□□□□□ -0.92
RTL3-201ENST00000321110 NOM1Q5C9Z4 860 aaKnown RBP9.29□□□□□ -0.92
RTL3-201ENST00000321110 GGT6Q6P531 493 aa9.29□□□□□ -0.92
RTL3-201ENST00000321110 HOMER1Q86YM7 354 aa9.29□□□□□ -0.92
RTL3-201ENST00000321110 TERF2IPQ9NYB0 399 aa9.29□□□□□ -0.92
RTL3-201ENST00000321110 MLH3Q9UHC1 1453 aa9.29□□□□□ -0.92
RTL3-201ENST00000321110 NEXMIFQ5QGS0 1516 aa9.29□□□□□ -0.92
RTL3-201ENST00000321110 KIF13AQ9H1H9 1805 aa9.29□□□□□ -0.92
RTL3-201ENST00000321110 AOX1Q06278 1338 aa9.29□□□□□ -0.92
RTL3-201ENST00000321110 URI1O94763 535 aaPredicted RBP9.29□□□□□ -0.92
RTL3-201ENST00000321110 LARP1Q6PKG0 1096 aaKnown RBP9.29□□□□□ -0.92
RTL3-201ENST00000321110 ZSWIM6Q9HCJ5 1215 aa9.29□□□□□ -0.92
RTL3-201ENST00000321110 PARP3Q9Y6F1 533 aa9.29□□□□□ -0.92
RTL3-201ENST00000321110 ANKRD65E5RJM6 399 aa9.28□□□□□ -0.92
RTL3-201ENST00000321110 KCNJ6P48051 423 aa9.28□□□□□ -0.92
RTL3-201ENST00000321110 PTH1RQ03431 593 aa9.28□□□□□ -0.92
RTL3-201ENST00000321110 LRRFIP1Q32MZ4 808 aaKnown RBP9.28□□□□□ -0.92
RTL3-201ENST00000321110 CWC27Q6UX04 472 aaKnown RBP9.28□□□□□ -0.92
RTL3-201ENST00000321110 AOPEPQ8N6M6 819 aa9.28□□□□□ -0.92
RTL3-201ENST00000321110 PI4K2BQ8TCG2 481 aa9.28□□□□□ -0.92
RTL3-201ENST00000321110 KCNG1Q9UIX4 513 aa9.28□□□□□ -0.92
RTL3-201ENST00000321110 IVLP07476 585 aa9.28□□□□□ -0.92
RTL3-201ENST00000321110 PRPF40BQ6NWY9 871 aaKnown RBP9.28□□□□□ -0.92
RTL3-201ENST00000321110 SRRTQ9BXP5 876 aaKnown RBP9.28□□□□□ -0.92
RTL3-201ENST00000321110 ARFGAP3Q9NP61 516 aa9.28□□□□□ -0.92
RTL3-201ENST00000321110 IMPACTQ9P2X3 320 aa9.28□□□□□ -0.92
RTL3-201ENST00000321110 CYP46A1Q9Y6A2 500 aa9.28□□□□□ -0.92
RTL3-201ENST00000321110 EMILIN1Q9Y6C2 1016 aa9.28□□□□□ -0.92
RTL3-201ENST00000321110 PREX1Q8TCU6 1659 aa9.28□□□□□ -0.92
RTL3-201ENST00000321110 ADGRL3Q9HAR2 1447 aa9.27□□□□□ -0.92
RTL3-201ENST00000321110 TUBB4AP04350 444 aa9.27□□□□□ -0.93
RTL3-201ENST00000321110 TPM1P09493 284 aa9.27□□□□□ -0.93
RTL3-201ENST00000321110 ATP8B2P98198 1209 aa9.27□□□□□ -0.93
RTL3-201ENST00000321110 NUTM2DQ5VT03 806 aaPredicted RBP9.27□□□□□ -0.93
RTL3-201ENST00000321110 NBPF6Q5VWK0 638 aa9.27□□□□□ -0.93
RTL3-201ENST00000321110 LEKR1Q6ZMV7 388 aa9.27□□□□□ -0.93
RTL3-201ENST00000321110 TMC6Q7Z403 805 aa9.27□□□□□ -0.93
RTL3-201ENST00000321110 CCDC150Q8NCX0 1101 aa9.27□□□□□ -0.93
RTL3-201ENST00000321110 NBPF4Q96M43 638 aa9.27□□□□□ -0.93
RTL3-201ENST00000321110 PPP6R1Q9UPN7 881 aa9.27□□□□□ -0.93
RTL3-201ENST00000321110 TTC41PQ6P2S7 1318 aa9.27□□□□□ -0.93
RTL3-201ENST00000321110 PDCP20941 246 aa9.27□□□□□ -0.93
RTL3-201ENST00000321110 SFPQP23246 707 aaKnown RBP eCLIP9.27□□□□□ -0.93
RTL3-201ENST00000321110 CCT4P50991 539 aaKnown RBP9.27□□□□□ -0.93
RTL3-201ENST00000321110 CORO7P57737 925 aa9.27□□□□□ -0.93
RTL3-201ENST00000321110 GPR161Q8N6U8 529 aaKnown RBP9.27□□□□□ -0.93
RTL3-201ENST00000321110 BANK1Q8NDB2 785 aa9.27□□□□□ -0.93
RTL3-201ENST00000321110 ERCC4Q92889 916 aaPredicted RBP9.27□□□□□ -0.93
RTL3-201ENST00000321110 PARD6BQ9BYG5 372 aa9.27□□□□□ -0.93
RTL3-201ENST00000321110 XPO4Q9C0E2 1151 aaKnown RBP9.27□□□□□ -0.93
RTL3-201ENST00000321110 DEF6Q9H4E7 631 aa9.27□□□□□ -0.93
RTL3-201ENST00000321110 ZSCAN16Q9H4T2 348 aaPredicted RBP9.27□□□□□ -0.93
RTL3-201ENST00000321110 CEP83Q9Y592 693 aa9.27□□□□□ -0.93
RTL3-201ENST00000321110 CHL1O00533 1208 aa9.26□□□□□ -0.93
RTL3-201ENST00000321110 MAP2K7O14733 419 aa9.26□□□□□ -0.93
RTL3-201ENST00000321110 RPS6KA5O75582 802 aa9.26□□□□□ -0.93
RTL3-201ENST00000321110 CCDC172P0C7W6 258 aa9.26□□□□□ -0.93
RTL3-201ENST00000321110 LONRF2Q1L5Z9 754 aa9.26□□□□□ -0.93
RTL3-201ENST00000321110 PPM1EQ8WY54 764 aa9.26□□□□□ -0.93
RTL3-201ENST00000321110 FBXW7Q969H0 707 aa9.26□□□□□ -0.93
RTL3-201ENST00000321110 TM6SF1Q9BZW5 370 aa9.26□□□□□ -0.93
RTL3-201ENST00000321110 GOLPH3LQ9H4A5 285 aa9.26□□□□□ -0.93
RTL3-201ENST00000321110 VPS18Q9P253 973 aa9.26□□□□□ -0.93
RTL3-201ENST00000321110 DLG5Q8TDM6 1919 aa9.26□□□□□ -0.93
RTL3-201ENST00000321110 SMC2O95347 1197 aa9.26□□□□□ -0.93
RTL3-201ENST00000321110 GSCP56915 257 aaPredicted RBP9.26□□□□□ -0.93
RTL3-201ENST00000321110 RSRC2Q7L4I2 434 aaKnown RBP9.26□□□□□ -0.93
RTL3-201ENST00000321110 SUGP1Q8IWZ8 645 aaKnown RBP9.26□□□□□ -0.93
RTL3-201ENST00000321110 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.26□□□□□ -0.93
RTL3-201ENST00000321110 HAP1P54257 671 aaPredicted RBP9.25□□□□□ -0.93
RTL3-201ENST00000321110 GNL2Q13823 731 aaKnown RBP9.25□□□□□ -0.93
RTL3-201ENST00000321110 SWT1Q5T5J6 900 aaKnown RBP9.25□□□□□ -0.93
RTL3-201ENST00000321110 KCNB2Q92953 911 aa9.25□□□□□ -0.93
RTL3-201ENST00000321110 CXorf56Q9H5V9 222 aa9.25□□□□□ -0.93
RTL3-201ENST00000321110 PDE11AQ9HCR9 933 aa9.25□□□□□ -0.93
RTL3-201ENST00000321110 ANO10Q9NW15 660 aa9.25□□□□□ -0.93
RTL3-201ENST00000321110 IFNKQ9P0W0 207 aa9.25□□□□□ -0.93
RTL3-201ENST00000321110 RESTQ13127 1097 aa9.25□□□□□ -0.93
RTL3-201ENST00000321110 MCTP2Q6DN12 878 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms