RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 PUS3Q9BZE2 481 aaKnown RBP12.95□□□□□ -0.34
TOP3A-201ENST00000321105 IKQ13123 557 aaPredicted RBP12.94□□□□□ -0.34
TOP3A-201ENST00000321105 RASEFQ8IZ41 740 aa12.94□□□□□ -0.34
TOP3A-201ENST00000321105 CCDC34Q96HJ3 373 aa12.94□□□□□ -0.34
TOP3A-201ENST00000321105 SNX14Q9Y5W7 946 aa12.94□□□□□ -0.34
TOP3A-201ENST00000321105 INO80Q9ULG1 1556 aaPredicted RBP12.94□□□□□ -0.34
TOP3A-201ENST00000321105 RBM5P52756 815 aaKnown RBP eCLIP12.94□□□□□ -0.34
TOP3A-201ENST00000321105 ZSCAN23Q3MJ62 389 aa12.94□□□□□ -0.34
TOP3A-201ENST00000321105 SMC2O95347 1197 aa12.94□□□□□ -0.34
TOP3A-201ENST00000321105 PDE4CQ08493 712 aa12.94□□□□□ -0.34
TOP3A-201ENST00000321105 NBPF5PQ86XG9 351 aaPredicted RBP12.94□□□□□ -0.34
TOP3A-201ENST00000321105 TRIM34Q9BYJ4 488 aa12.94□□□□□ -0.34
TOP3A-201ENST00000321105 ARHGEF40Q8TER5 1519 aa12.94□□□□□ -0.34
TOP3A-201ENST00000321105 A0A0D9SFI3 127 aa12.93□□□□□ -0.34
TOP3A-201ENST00000321105 CCDC192P0DO97 292 aa12.93□□□□□ -0.34
TOP3A-201ENST00000321105 SYT1P21579 422 aa12.93□□□□□ -0.34
TOP3A-201ENST00000321105 ITGA6P23229 1130 aa12.93□□□□□ -0.34
TOP3A-201ENST00000321105 ZSCAN25Q6NSZ9 544 aa12.93□□□□□ -0.34
TOP3A-201ENST00000321105 C8orf76Q96K31 380 aa12.93□□□□□ -0.34
TOP3A-201ENST00000321105 ZNF830Q96NB3 372 aaPredicted RBP12.93□□□□□ -0.34
TOP3A-201ENST00000321105 ZKSCAN3Q9BRR0 538 aa12.93□□□□□ -0.34
TOP3A-201ENST00000321105 TEX13AQ9BXU3 409 aaPredicted RBP12.93□□□□□ -0.34
TOP3A-201ENST00000321105 ZNF652Q9Y2D9 606 aa12.93□□□□□ -0.34
TOP3A-201ENST00000321105 PNPLA6Q8IY17 1366 aa12.93□□□□□ -0.34
TOP3A-201ENST00000321105 LMTK3Q96Q04 1460 aa12.93□□□□□ -0.34
TOP3A-201ENST00000321105 KLF18A0A0U1RQI7 1052 aa12.93□□□□□ -0.34
TOP3A-201ENST00000321105 SLC5A1P13866 664 aa12.93□□□□□ -0.34
TOP3A-201ENST00000321105 CAVIN4Q5BKX8 364 aa12.93□□□□□ -0.34
TOP3A-201ENST00000321105 SYNE4Q8N205 404 aa12.93□□□□□ -0.34
TOP3A-201ENST00000321105 SH2B1Q9NRF2 756 aaPredicted RBP12.93□□□□□ -0.34
TOP3A-201ENST00000321105 CCDC171Q6TFL3 1326 aa12.93□□□□□ -0.34
TOP3A-201ENST00000321105 RBM10P98175 930 aaKnown RBP12.93□□□□□ -0.34
TOP3A-201ENST00000321105 NCBP3Q53F19 620 aaKnown RBP12.93□□□□□ -0.34
TOP3A-201ENST00000321105 OTUD7BQ6GQQ9 843 aa12.93□□□□□ -0.34
TOP3A-201ENST00000321105 ORC3Q9UBD5 711 aaPredicted RBP12.93□□□□□ -0.34
TOP3A-201ENST00000321105 NPHP4O75161 1426 aaPredicted RBP12.93□□□□□ -0.34
TOP3A-201ENST00000321105 CPS1P31327 1500 aa12.93□□□□□ -0.34
TOP3A-201ENST00000321105 SNAP23O00161 211 aa12.93□□□□□ -0.34
TOP3A-201ENST00000321105 TRIM22Q8IYM9 498 aa12.93□□□□□ -0.34
TOP3A-201ENST00000321105 PDILTQ8N807 584 aa12.93□□□□□ -0.34
TOP3A-201ENST00000321105 C6orf229H3BNL8 230 aa12.92□□□□□ -0.34
TOP3A-201ENST00000321105 KLHL40Q2TBA0 621 aa12.92□□□□□ -0.34
TOP3A-201ENST00000321105 QRICH2Q9H0J4 1663 aa12.92□□□□□ -0.34
TOP3A-201ENST00000321105 TTC41PQ6P2S7 1318 aa12.92□□□□□ -0.34
TOP3A-201ENST00000321105 EYA2O00167 538 aa12.92□□□□□ -0.34
TOP3A-201ENST00000321105 HOXB7P09629 217 aa12.92□□□□□ -0.34
TOP3A-201ENST00000321105 ZSCAN22P10073 491 aaPredicted RBP12.92□□□□□ -0.34
TOP3A-201ENST00000321105 EPHA10Q5JZY3 1008 aa12.92□□□□□ -0.34
TOP3A-201ENST00000321105 ADCK5Q3MIX3 580 aa12.92□□□□□ -0.34
TOP3A-201ENST00000321105 PI16Q6UXB8 463 aa12.92□□□□□ -0.34
TOP3A-201ENST00000321105 F8W031 263 aaPredicted RBP12.91□□□□□ -0.34
TOP3A-201ENST00000321105 TTLL5Q6EMB2 1281 aa12.91□□□□□ -0.34
TOP3A-201ENST00000321105 ZSCAN29Q8IWY8 852 aaPredicted RBP12.91□□□□□ -0.34
TOP3A-201ENST00000321105 ZNF396Q96N95 335 aaPredicted RBP12.91□□□□□ -0.34
TOP3A-201ENST00000321105 CCDC173Q0VFZ6 552 aa12.91□□□□□ -0.34
TOP3A-201ENST00000321105 HSP90AA4PQ58FG1 418 aa12.91□□□□□ -0.34
TOP3A-201ENST00000321105 HOMER1Q86YM7 354 aa12.91□□□□□ -0.34
TOP3A-201ENST00000321105 NEXMIFQ5QGS0 1516 aa12.91□□□□□ -0.34
TOP3A-201ENST00000321105 BRINP3Q76B58 766 aa12.91□□□□□ -0.34
TOP3A-201ENST00000321105 CDK12Q9NYV4 1490 aaPredicted RBP12.9□□□□□ -0.34
TOP3A-201ENST00000321105 RFC4P35249 363 aa12.9□□□□□ -0.34
TOP3A-201ENST00000321105 TMEM67Q5HYA8 995 aa12.9□□□□□ -0.34
TOP3A-201ENST00000321105 SMIM5Q71RC9 77 aa12.9□□□□□ -0.34
TOP3A-201ENST00000321105 DZIP1Q86YF9 867 aaKnown RBP12.9□□□□□ -0.34
TOP3A-201ENST00000321105 LRRC7Q96NW7 1537 aa12.9□□□□□ -0.34
TOP3A-201ENST00000321105 TOM1O60784 492 aa12.9□□□□□ -0.34
TOP3A-201ENST00000321105 MAP3K11Q16584 847 aa12.9□□□□□ -0.34
TOP3A-201ENST00000321105 XAGE2Q96GT9 111 aa12.9□□□□□ -0.34
TOP3A-201ENST00000321105 CFAP45Q9UL16 551 aa12.9□□□□□ -0.34
TOP3A-201ENST00000321105 USP5P45974 858 aa12.9□□□□□ -0.34
TOP3A-201ENST00000321105 ANAPC15P60006 121 aa12.9□□□□□ -0.34
TOP3A-201ENST00000321105 SLC27A2O14975 620 aa12.89□□□□□ -0.35
TOP3A-201ENST00000321105 JAK2O60674 1132 aa12.89□□□□□ -0.35
TOP3A-201ENST00000321105 CYP7A1P22680 504 aa12.89□□□□□ -0.35
TOP3A-201ENST00000321105 ZAP70P43403 619 aa12.89□□□□□ -0.35
TOP3A-201ENST00000321105 MAGEB6Q8N7X4 407 aa12.89□□□□□ -0.35
TOP3A-201ENST00000321105 DBNLQ9UJU6 430 aaKnown RBP12.89□□□□□ -0.35
TOP3A-201ENST00000321105 ZBTB1Q9Y2K1 713 aa12.89□□□□□ -0.35
TOP3A-201ENST00000321105 SLC12A7Q9Y666 1083 aa12.89□□□□□ -0.35
TOP3A-201ENST00000321105 GADD45BO75293 160 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-201ENST00000321105 PRDM1O75626 825 aa12.89□□□□□ -0.35
TOP3A-201ENST00000321105 BABAM1Q9NWV8 329 aa12.89□□□□□ -0.35
TOP3A-201ENST00000321105 CPSF1Q10570 1443 aaKnown RBP12.89□□□□□ -0.35
TOP3A-201ENST00000321105 GNPATO15228 680 aa12.89□□□□□ -0.35
TOP3A-201ENST00000321105 CHGBP05060 677 aa12.89□□□□□ -0.35
TOP3A-201ENST00000321105 FAM177A1Q8N128 213 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-201ENST00000321105 PCMTD1Q96MG8 357 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-201ENST00000321105 IBTKQ9P2D0 1353 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-201ENST00000321105 GOLGA8AA7E2F4 631 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 MARCKSP29966 332 aaPredicted RBP12.88□□□□□ -0.35
TOP3A-201ENST00000321105 DHX8Q14562 1220 aaKnown RBP12.88□□□□□ -0.35
TOP3A-201ENST00000321105 RUFY3Q7L099 469 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 AK7Q96M32 723 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 SETDB2Q96T68 719 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 MYL10Q9BUA6 226 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 SLC26A6Q9BXS9 759 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 DACT1Q9NYF0 836 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 XBP1P17861 261 aa12.88□□□□□ -0.35
TOP3A-201ENST00000321105 UTP14AQ9BVJ6 771 aaKnown RBP12.88□□□□□ -0.35
TOP3A-201ENST00000321105 NSFL1CQ9UNZ2 370 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms