RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 COL4A1P02462 1669 aa12.73□□□□□ -0.37
CCDC65-202ENST00000320516 CACNA1FO60840 1977 aa12.73□□□□□ -0.37
CCDC65-202ENST00000320516 TAF1P21675 1872 aa12.73□□□□□ -0.37
CCDC65-202ENST00000320516 FZD9O00144 591 aa12.73□□□□□ -0.37
CCDC65-202ENST00000320516 DDNO94850 711 aaPredicted RBP12.73□□□□□ -0.37
CCDC65-202ENST00000320516 RTFDC1Q9BY42 306 aaPredicted RBP12.73□□□□□ -0.37
CCDC65-202ENST00000320516 NEURL1BA8MQ27 555 aa12.72□□□□□ -0.37
CCDC65-202ENST00000320516 HSPA6P17066 643 aa12.72□□□□□ -0.37
CCDC65-202ENST00000320516 JARID2Q92833 1246 aaPredicted RBP12.72□□□□□ -0.37
CCDC65-202ENST00000320516 CELF1Q92879 486 aaKnown RBP12.72□□□□□ -0.37
CCDC65-202ENST00000320516 CDHR2Q9BYE9 1310 aa12.72□□□□□ -0.37
CCDC65-202ENST00000320516 ZNF541Q9H0D2 1346 aa12.72□□□□□ -0.37
CCDC65-202ENST00000320516 LRRC37AA6NMS7 1700 aa12.72□□□□□ -0.37
CCDC65-202ENST00000320516 NEXNQ0ZGT2 675 aa12.71□□□□□ -0.37
CCDC65-202ENST00000320516 CWF19L2Q2TBE0 894 aaKnown RBP12.71□□□□□ -0.37
CCDC65-202ENST00000320516 TMC4Q7Z404 712 aa12.71□□□□□ -0.37
CCDC65-202ENST00000320516 C16orf71Q8IYS4 520 aaPredicted RBP12.71□□□□□ -0.37
CCDC65-202ENST00000320516 L3MBTL3Q96JM7 780 aaPredicted RBP12.71□□□□□ -0.37
CCDC65-202ENST00000320516 CEP350Q5VT06 3117 aa12.71□□□□□ -0.37
CCDC65-202ENST00000320516 PDE8AO60658 829 aa12.71□□□□□ -0.38
CCDC65-202ENST00000320516 HSP90B1P14625 803 aaKnown RBP12.71□□□□□ -0.38
CCDC65-202ENST00000320516 FKBP5Q13451 457 aaPredicted RBP12.71□□□□□ -0.38
CCDC65-202ENST00000320516 TMX4Q9H1E5 349 aaPredicted RBP12.71□□□□□ -0.38
CCDC65-202ENST00000320516 VPS33BQ9H267 617 aa12.71□□□□□ -0.38
CCDC65-202ENST00000320516 E9PSI1 815 aa12.7□□□□□ -0.38
CCDC65-202ENST00000320516 FSTL1Q12841 308 aa12.7□□□□□ -0.38
CCDC65-202ENST00000320516 MPNDQ8N594 471 aa12.7□□□□□ -0.38
CCDC65-202ENST00000320516 DNAAF4Q8WXU2 420 aa12.7□□□□□ -0.38
CCDC65-202ENST00000320516 JDP2Q8WYK2 163 aa12.7□□□□□ -0.38
CCDC65-202ENST00000320516 DUOX1Q9NRD9 1551 aa12.7□□□□□ -0.38
CCDC65-202ENST00000320516 H7C1W4 665 aa12.69□□□□□ -0.38
CCDC65-202ENST00000320516 SLFN5Q08AF3 891 aa12.69□□□□□ -0.38
CCDC65-202ENST00000320516 DPP8Q6V1X1 898 aaPredicted RBP12.69□□□□□ -0.38
CCDC65-202ENST00000320516 LARGE2Q8N3Y3 721 aa12.69□□□□□ -0.38
CCDC65-202ENST00000320516 SEC31BQ9NQW1 1179 aa12.69□□□□□ -0.38
CCDC65-202ENST00000320516 PPIP5K2O43314 1243 aa12.69□□□□□ -0.38
CCDC65-202ENST00000320516 RPS8P62241 208 aaKnown RBP12.69□□□□□ -0.38
CCDC65-202ENST00000320516 GCKRQ14397 625 aa12.69□□□□□ -0.38
CCDC65-202ENST00000320516 CCDC152Q4G0S7 254 aa12.69□□□□□ -0.38
CCDC65-202ENST00000320516 SUPT20HQ8NEM7 779 aa12.69□□□□□ -0.38
CCDC65-202ENST00000320516 LINS1Q8NG48 757 aa12.69□□□□□ -0.38
CCDC65-202ENST00000320516 CASP7P55210 303 aa12.68□□□□□ -0.38
CCDC65-202ENST00000320516 AOC3Q16853 763 aa12.68□□□□□ -0.38
CCDC65-202ENST00000320516 GPC2Q8N158 579 aa12.68□□□□□ -0.38
CCDC65-202ENST00000320516 SMC1BQ8NDV3 1235 aa12.68□□□□□ -0.38
CCDC65-202ENST00000320516 SCN4AP35499 1836 aa12.68□□□□□ -0.38
CCDC65-202ENST00000320516 LTBP1Q14766 1721 aa12.67□□□□□ -0.38
CCDC65-202ENST00000320516 F6X3S4 739 aa12.67□□□□□ -0.38
CCDC65-202ENST00000320516 CTSWP56202 376 aa12.67□□□□□ -0.38
CCDC65-202ENST00000320516 KIAA2012Q0VF49 1180 aa12.67□□□□□ -0.38
CCDC65-202ENST00000320516 BEND3Q5T5X7 828 aa12.67□□□□□ -0.38
CCDC65-202ENST00000320516 UBE3BQ7Z3V4 1068 aa12.67□□□□□ -0.38
CCDC65-202ENST00000320516 TRMT2AQ8IZ69 625 aaKnown RBP12.67□□□□□ -0.38
CCDC65-202ENST00000320516 TTLL11Q8NHH1 800 aa12.67□□□□□ -0.38
CCDC65-202ENST00000320516 CDCA7LQ96GN5 454 aa12.67□□□□□ -0.38
CCDC65-202ENST00000320516 PLA2G12BQ9BX93 195 aa12.67□□□□□ -0.38
CCDC65-202ENST00000320516 IQCA1LA6NCM1 817 aa12.66□□□□□ -0.38
CCDC65-202ENST00000320516 EIF6P56537 245 aaKnown RBP12.66□□□□□ -0.38
CCDC65-202ENST00000320516 NIM1KQ8IY84 436 aa12.66□□□□□ -0.38
CCDC65-202ENST00000320516 CCDC85AQ96PX6 553 aaPredicted RBP12.66□□□□□ -0.38
CCDC65-202ENST00000320516 TAF1DQ9H5J8 278 aaPredicted RBP12.66□□□□□ -0.38
CCDC65-202ENST00000320516 NSFL1CQ9UNZ2 370 aaKnown RBP12.66□□□□□ -0.38
CCDC65-202ENST00000320516 RTL9Q8NET4 1388 aa12.66□□□□□ -0.38
CCDC65-202ENST00000320516 POTEIP0CG38 1075 aa12.66□□□□□ -0.38
CCDC65-202ENST00000320516 POTEJP0CG39 1038 aa12.66□□□□□ -0.38
CCDC65-202ENST00000320516 APLP1P51693 650 aa12.66□□□□□ -0.38
CCDC65-202ENST00000320516 GPSM2P81274 684 aa12.66□□□□□ -0.38
CCDC65-202ENST00000320516 POLLQ9UGP5 575 aa12.66□□□□□ -0.38
CCDC65-202ENST00000320516 ZNRF3Q9ULT6 936 aa12.66□□□□□ -0.38
CCDC65-202ENST00000320516 MYH3P11055 1940 aa12.65□□□□□ -0.38
CCDC65-202ENST00000320516 DIEXFQ68CQ4 756 aaKnown RBP12.65□□□□□ -0.38
CCDC65-202ENST00000320516 MRPL50Q8N5N7 158 aaKnown RBP12.65□□□□□ -0.38
CCDC65-202ENST00000320516 GREM2Q9H772 168 aa12.65□□□□□ -0.38
CCDC65-202ENST00000320516 PODXL2Q9NZ53 605 aa12.65□□□□□ -0.38
CCDC65-202ENST00000320516 SCNN1DP51172 638 aa12.64□□□□□ -0.39
CCDC65-202ENST00000320516 CXCL9Q07325 125 aa12.64□□□□□ -0.39
CCDC65-202ENST00000320516 MIER1Q8N108 512 aa12.64□□□□□ -0.39
CCDC65-202ENST00000320516 HACL1Q9UJ83 578 aa12.64□□□□□ -0.39
CCDC65-202ENST00000320516 ADAMTSL1Q8N6G6 1762 aa12.64□□□□□ -0.39
CCDC65-202ENST00000320516 CSF1RP07333 972 aa12.64□□□□□ -0.39
CCDC65-202ENST00000320516 EPHX2P34913 555 aa12.64□□□□□ -0.39
CCDC65-202ENST00000320516 TBC1D16Q8TBP0 767 aa12.64□□□□□ -0.39
CCDC65-202ENST00000320516 SSH1Q8WYL5 1049 aa12.64□□□□□ -0.39
CCDC65-202ENST00000320516 GJA3Q9Y6H8 435 aa12.64□□□□□ -0.39
CCDC65-202ENST00000320516 YDJCA8MPS7 323 aa12.63□□□□□ -0.39
CCDC65-202ENST00000320516 WASHC4Q2M389 1173 aa12.63□□□□□ -0.39
CCDC65-202ENST00000320516 CHADLQ6NUI6 762 aa12.63□□□□□ -0.39
CCDC65-202ENST00000320516 LDHDQ86WU2 507 aa12.63□□□□□ -0.39
CCDC65-202ENST00000320516 ANKRD18AQ8IVF6 992 aa12.63□□□□□ -0.39
CCDC65-202ENST00000320516 CDC5LQ99459 802 aaKnown RBP12.63□□□□□ -0.39
CCDC65-202ENST00000320516 DNAJC5GQ8N7S2 189 aa12.62□□□□□ -0.39
CCDC65-202ENST00000320516 BSDC1Q9NW68 430 aaPredicted RBP12.62□□□□□ -0.39
CCDC65-202ENST00000320516 C6orf229H3BNL8 230 aa12.61□□□□□ -0.39
CCDC65-202ENST00000320516 ALDH1L1O75891 902 aa12.61□□□□□ -0.39
CCDC65-202ENST00000320516 FOXO4P98177 505 aa12.61□□□□□ -0.39
CCDC65-202ENST00000320516 FAM161AQ3B820 660 aa12.61□□□□□ -0.39
CCDC65-202ENST00000320516 GPR101Q96P66 508 aaPredicted RBP12.61□□□□□ -0.39
CCDC65-202ENST00000320516 PTPRCP08575 1304 aa12.61□□□□□ -0.39
CCDC65-202ENST00000320516 XDHP47989 1333 aa12.61□□□□□ -0.39
CCDC65-202ENST00000320516 GRM8O00222 908 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms