RNA–Protein interactions for RNA: ENST00000320031.12

ITGA3-202, Transcript of integrin subunit alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGA3, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-202ENST00000320031 SETDB2Q96T68 719 aa19.24■□□□□ 0.67
ITGA3-202ENST00000320031 USP26Q9BXU7 913 aa19.24■□□□□ 0.67
ITGA3-202ENST00000320031 MFSD6Q6ZSS7 791 aa19.24■□□□□ 0.67
ITGA3-202ENST00000320031 NLRP3Q96P20 1036 aa19.24■□□□□ 0.67
ITGA3-202ENST00000320031 NPHP4O75161 1426 aaPredicted RBP19.24■□□□□ 0.67
ITGA3-202ENST00000320031 CTAGE5O15320 804 aa19.24■□□□□ 0.67
ITGA3-202ENST00000320031 KRT18P05783 430 aaKnown RBP19.24■□□□□ 0.67
ITGA3-202ENST00000320031 TMEM67Q5HYA8 995 aa19.24■□□□□ 0.67
ITGA3-202ENST00000320031 CATIPQ7Z7H3 387 aa19.24■□□□□ 0.67
ITGA3-202ENST00000320031 IL17REQ8NFR9 667 aa19.24■□□□□ 0.67
ITGA3-202ENST00000320031 DDX19AQ9NUU7 478 aaKnown RBP19.24■□□□□ 0.67
ITGA3-202ENST00000320031 A2ML1A8K2U0 1454 aa19.23■□□□□ 0.67
ITGA3-202ENST00000320031 LMTK3Q96Q04 1460 aa19.23■□□□□ 0.67
ITGA3-202ENST00000320031 IRS4O14654 1257 aaPredicted RBP19.23■□□□□ 0.67
ITGA3-202ENST00000320031 TFCP2Q12800 502 aa19.23■□□□□ 0.67
ITGA3-202ENST00000320031 BRF1Q92994 677 aa19.23■□□□□ 0.67
ITGA3-202ENST00000320031 PRR36Q9H6K5 1346 aa19.23■□□□□ 0.67
ITGA3-202ENST00000320031 BAG3O95817 575 aa19.23■□□□□ 0.67
ITGA3-202ENST00000320031 RBM25P49756 843 aaKnown RBP19.23■□□□□ 0.67
ITGA3-202ENST00000320031 CCDC191Q8NCU4 936 aa19.23■□□□□ 0.67
ITGA3-202ENST00000320031 LRRIQ1Q96JM4 1722 aa19.23■□□□□ 0.67
ITGA3-202ENST00000320031 IARSP41252 1262 aaKnown RBP19.22■□□□□ 0.67
ITGA3-202ENST00000320031 GUCY1B3Q02153 619 aa19.22■□□□□ 0.67
ITGA3-202ENST00000320031 C8orf37Q96NL8 207 aa19.22■□□□□ 0.67
ITGA3-202ENST00000320031 IGSF1Q8N6C5 1336 aa19.22■□□□□ 0.67
ITGA3-202ENST00000320031 ZSCAN22P10073 491 aaPredicted RBP19.22■□□□□ 0.67
ITGA3-202ENST00000320031 ZSCAN16Q9H4T2 348 aaPredicted RBP19.22■□□□□ 0.67
ITGA3-202ENST00000320031 LMTK2Q8IWU2 1503 aa19.22■□□□□ 0.67
ITGA3-202ENST00000320031 OFD1O75665 1012 aa19.22■□□□□ 0.67
ITGA3-202ENST00000320031 ORC3Q9UBD5 711 aaPredicted RBP19.22■□□□□ 0.67
ITGA3-202ENST00000320031 SEC63Q9UGP8 760 aaKnown RBP19.22■□□□□ 0.67
ITGA3-202ENST00000320031 NYXQ9GZU5 481 aa19.22■□□□□ 0.67
ITGA3-202ENST00000320031 ANO10Q9NW15 660 aa19.22■□□□□ 0.67
ITGA3-202ENST00000320031 PPP1R1BQ9UD71 204 aaPredicted RBP19.22■□□□□ 0.67
ITGA3-202ENST00000320031 CAMK4Q16566 473 aa19.21■□□□□ 0.67
ITGA3-202ENST00000320031 CDK12Q9NYV4 1490 aaPredicted RBP19.21■□□□□ 0.67
ITGA3-202ENST00000320031 C6orf229H3BNL8 230 aa19.21■□□□□ 0.67
ITGA3-202ENST00000320031 UBE2HP62256 183 aa19.21■□□□□ 0.67
ITGA3-202ENST00000320031 METAP2P50579 478 aaKnown RBP eCLIP19.2■□□□□ 0.66
ITGA3-202ENST00000320031 BRPF1P55201 1214 aaPredicted RBP19.2■□□□□ 0.66
ITGA3-202ENST00000320031 PDE4BQ07343 736 aa19.2■□□□□ 0.66
ITGA3-202ENST00000320031 RNF113AO15541 343 aaKnown RBP19.2■□□□□ 0.66
ITGA3-202ENST00000320031 ST5P78524 1137 aa19.2■□□□□ 0.66
ITGA3-202ENST00000320031 PIBF1Q8WXW3 757 aa19.2■□□□□ 0.66
ITGA3-202ENST00000320031 ARGLU1Q9NWB6 273 aaPredicted RBP19.2■□□□□ 0.66
ITGA3-202ENST00000320031 SLC9C2Q5TAH2 1124 aa19.2■□□□□ 0.66
ITGA3-202ENST00000320031 KRT23Q9C075 422 aa19.2■□□□□ 0.66
ITGA3-202ENST00000320031 MADDQ8WXG6 1647 aa19.2■□□□□ 0.66
ITGA3-202ENST00000320031 ZNF496Q96IT1 587 aaPredicted RBP19.2■□□□□ 0.66
ITGA3-202ENST00000320031 CNNM2Q9H8M5 875 aa19.2■□□□□ 0.66
ITGA3-202ENST00000320031 XRCC6P12956 609 aaKnown RBP eCLIP19.19■□□□□ 0.66
ITGA3-202ENST00000320031 PPFIBP1Q86W92 1011 aa19.19■□□□□ 0.66
ITGA3-202ENST00000320031 CRACR2BQ8N4Y2 399 aaPredicted RBP19.19■□□□□ 0.66
ITGA3-202ENST00000320031 CRNKL1Q9BZJ0 848 aaKnown RBP19.19■□□□□ 0.66
ITGA3-202ENST00000320031 ADGRB3O60242 1522 aa19.19■□□□□ 0.66
ITGA3-202ENST00000320031 BCORL1Q5H9F3 1711 aa19.19■□□□□ 0.66
ITGA3-202ENST00000320031 OTUD7AQ8TE49 926 aaPredicted RBP19.19■□□□□ 0.66
ITGA3-202ENST00000320031 BMP2KQ9NSY1 1161 aaPredicted RBP19.19■□□□□ 0.66
ITGA3-202ENST00000320031 INTS4Q96HW7 963 aaKnown RBP19.19■□□□□ 0.66
ITGA3-202ENST00000320031 ERVV-2B6SEH9 535 aa19.19■□□□□ 0.66
ITGA3-202ENST00000320031 EYA2O00167 538 aa19.19■□□□□ 0.66
ITGA3-202ENST00000320031 GDPD2Q9HCC8 539 aa19.19■□□□□ 0.66
ITGA3-202ENST00000320031 NBPF7P0C2Y1 421 aaPredicted RBP19.18■□□□□ 0.66
ITGA3-202ENST00000320031 PNMA6EA0A0J9YXQ4 647 aa19.18■□□□□ 0.66
ITGA3-202ENST00000320031 GIGYF1O75420 1035 aaPredicted RBP19.18■□□□□ 0.66
ITGA3-202ENST00000320031 KIF5BP33176 963 aa19.18■□□□□ 0.66
ITGA3-202ENST00000320031 GSTO1P78417 241 aa19.18■□□□□ 0.66
ITGA3-202ENST00000320031 GCKRQ14397 625 aa19.18■□□□□ 0.66
ITGA3-202ENST00000320031 MICU3Q86XE3 530 aa19.18■□□□□ 0.66
ITGA3-202ENST00000320031 TMTC2Q8N394 836 aa19.18■□□□□ 0.66
ITGA3-202ENST00000320031 ZGPATQ8N5A5 531 aaKnown RBP19.18■□□□□ 0.66
ITGA3-202ENST00000320031 NECAB1Q8N987 351 aa19.18■□□□□ 0.66
ITGA3-202ENST00000320031 NAP1L1P55209 391 aaKnown RBP19.18■□□□□ 0.66
ITGA3-202ENST00000320031 CREB3L3Q68CJ9 461 aa19.18■□□□□ 0.66
ITGA3-202ENST00000320031 CCDC82Q8N4S0 544 aa19.18■□□□□ 0.66
ITGA3-202ENST00000320031 TMEM94Q12767 1356 aa19.18■□□□□ 0.66
ITGA3-202ENST00000320031 KLF18A0A0U1RQI7 1052 aa19.18■□□□□ 0.66
ITGA3-202ENST00000320031 DDX17Q92841 729 aaKnown RBP19.18■□□□□ 0.66
ITGA3-202ENST00000320031 TFIP11Q9UBB9 837 aaKnown RBP19.18■□□□□ 0.66
ITGA3-202ENST00000320031 GLI2P10070 1586 aa19.17■□□□□ 0.66
ITGA3-202ENST00000320031 CYP7A1P22680 504 aa19.17■□□□□ 0.66
ITGA3-202ENST00000320031 TPTE2Q6XPS3 522 aa19.17■□□□□ 0.66
ITGA3-202ENST00000320031 ZNHIT6Q9NWK9 470 aaKnown RBP19.17■□□□□ 0.66
ITGA3-202ENST00000320031 E9PCH4 1651 aa19.17■□□□□ 0.66
ITGA3-202ENST00000320031 PHKG2P15735 406 aa19.17■□□□□ 0.66
ITGA3-202ENST00000320031 ARHGEF25Q86VW2 580 aa19.17■□□□□ 0.66
ITGA3-202ENST00000320031 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.17■□□□□ 0.66
ITGA3-202ENST00000320031 MPHOSPH10O00566 681 aaKnown RBP19.17■□□□□ 0.66
ITGA3-202ENST00000320031 PARP10Q53GL7 1025 aa19.17■□□□□ 0.66
ITGA3-202ENST00000320031 CCDC171Q6TFL3 1326 aa19.16■□□□□ 0.66
ITGA3-202ENST00000320031 TNNI3KQ59H18 835 aa19.16■□□□□ 0.66
ITGA3-202ENST00000320031 Q6ZUG5 572 aa19.16■□□□□ 0.66
ITGA3-202ENST00000320031 FSIP1Q8NA03 581 aa19.16■□□□□ 0.66
ITGA3-202ENST00000320031 TCEANC2Q96MN5 208 aa19.16■□□□□ 0.66
ITGA3-202ENST00000320031 FPGT-TNNI3KV9GXZ4 949 aa19.16■□□□□ 0.66
ITGA3-202ENST00000320031 TSPY2A6NKD2 308 aa19.16■□□□□ 0.66
ITGA3-202ENST00000320031 SUCLG2Q96I99 432 aa19.16■□□□□ 0.66
ITGA3-202ENST00000320031 RTCBQ9Y3I0 505 aaKnown RBP19.16■□□□□ 0.66
ITGA3-202ENST00000320031 GNAT2P19087 354 aa19.15■□□□□ 0.66
ITGA3-202ENST00000320031 ANKARQ7Z5J8 1434 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms